Name: Liquorilactobacillus aquaticus DSM 21051
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6691

Type strain:

Species: Liquorilactobacillus aquaticus

Culture col. no.: DSM 21051, CECT 7355, IMCC 1736, JCM 16869

Strain history: CECT 7355 <-- R. Máñes-Lázaro <-- J.-C. Cho and J. Song IMCC 1736.

NCBI tax ID(s): 1423725 (strain), 392566 (species)

SI-ID 293947

CECT 7355, DSM 21051, JCM 16869, LMG 26190

Section

Liquorilactobacillus aquaticus DSM 21051 is a microaerophile, mesophilic, Gram-positive bacterium that was isolated from surface of a eutrophic freshwater pond.

Gram-positive
motile
rod-shaped
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Liquorilactobacillus*
	Species	**Liquorilactobacillus aquaticus**
	Full Scientific Name (LPSN)	Liquorilactobacillus aquaticus (Mañes-Lázaro et al. 2009) Zheng et al. 2020

Synonym

Lactobacillus aquaticus

Information on morphological and physiological properties Morphology

[Ref.: #29191]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #29191]	Cell length	2.79 µm

[Ref.: #29191]	Cell width	1.2 µm

[Ref.: #29191]	Cell shape	rod-shaped

[Ref.: #29191]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15481]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #15481]

Culture medium growth

[Ref.: #15481]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15481]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15481]	growth	37 °C
[Ref.: #29191]	growth	15-45 °C
[Ref.: #29191]	optimum	30 °C
[Ref.: #67770]	growth	26 °C

[Ref.: #15481]	Temperature range	mesophilic
[Ref.: #29191]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29191]			optimum	6.25
[Ref.: #29191]			growth	4.5-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #15481]	Oxygen tolerance	microaerophile
[Ref.: #29191]	Oxygen tolerance	microaerophile

[Ref.: #29191]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.978

[Ref.: #29191]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29191]	cellobiose ChEBI	+	carbon source
[Ref.: #29191]	esculin ChEBI	+	hydrolysis
[Ref.: #29191]	fructose ChEBI	+	carbon source
[Ref.: #29191]	glucose ChEBI	+	carbon source
[Ref.: #29191]	maltose ChEBI	+	carbon source
[Ref.: #29191]	mannitol ChEBI	+	carbon source
[Ref.: #29191]	mannose ChEBI	+	carbon source
[Ref.: #29191]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #29191]	salicin ChEBI	+	carbon source
[Ref.: #29191]	sucrose ChEBI	+	carbon source
[Ref.: #29191]	trehalose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15481]	Sample type/isolated from	surface of a eutrophic freshwater pond
[Ref.: #15481]	Country	Republic of Korea
[Ref.: #15481]	Country ISO 3 Code	KOR
[Ref.: #15481]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Korean freshwater pond
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Pond (small)
#Environmental	#Aquatic	#Surface water

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC519860 (>99% sequence identity) for Liquorilactobacillus from Microbeatlas

Aquatic Samples	57
Soil Samples	39
Animal Samples	1693
Plant Samples	135
Total Samples	1924

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15481]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15481]	Lactobacillus aquaticus strain IMCC1736 16S ribosomal RNA gene, partial sequence	DQ664203	1528	ENA	392566 tax ID
[Ref.: #67770]	Lactobacillus aquaticus JCM 16869 gene for 16S rRNA, partial sequence	LC519860	1500	ENA	392566 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Liquorilactobacillus aquaticus DSM 21051	GCA_001436755	scaffold	GenBank	1423725 tax ID
[Ref.: #66792]	Lactobacillus aquaticus DSM 21051	1423725.3	wgs	PATRIC	1423725 tax ID	*
[Ref.: #66792]	Liquorilactobacillus aquaticus DSM 21051	2667527752	draft	JGI IMG/M	1423725 tax ID	*

[Ref.: #15481]	GC-content	39.15±0.07 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29191]	GC-content	39.15 mol%
[Ref.: #67770]	GC-content	37.4 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	39.15 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Liquorilactobacillus aquaticus DSM 21051 DSM 21051 NCBI: GCA_001436755.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus aquaticus DSM 21051 PATRIC: 1423725.3
[Ref.: #69480]	motile	yes	74.936	yes
[Ref.: #69480]	gram-positive	yes	92.584	yes
[Ref.: #69480]	anaerobic	no	88.45	yes
[Ref.: #69480]	halophile	yes	73.497	no
[Ref.: #69480]	spore-forming	no	88.326	yes
[Ref.: #69480]	glucose-util	yes	85.982	yes
[Ref.: #69480]	aerobic	no	95.944	yes
[Ref.: #69480]	flagellated	no	81.581	no
[Ref.: #69480]	glucose-ferment	yes	84.465	no
[Ref.: #69480]	thermophile	no	98.714	yes

Availability in culture collections External links

[Ref.: #15481]

Culture collection no.

DSM 21051, CECT 7355, IMCC 1736, JCM 16869

[Ref.: #76165]

SI-ID 293947

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lactobacillus aquaticus sp. nov., isolated from a Korean freshwater pond.	Manes-Lazaro R, Song J, Pardo I, Cho JC, Ferrer S	Int J Syst Evol Microbiol	10.1099/ijs.0.008276-0	2009	*

References

#15481

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21051

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29191

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25615 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#76165

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID293947.1 )

#25615

IJSEM 2215 2009 ( DOI 10.1099/ijs.0.008276-0 , PubMed 19620384 )

* These data were automatically processed and therefore are not curated

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Lactobacillus aquaticus DSM 21051

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