| [Ref.: #8823] |
Sample type/isolated from |
San Francisco sourdough |
| |
| [Ref.: #49936] |
Sample type/isolated from |
San Francisco sour dough |
| |
| [Ref.: #67770] |
Sample type/isolated from |
San Francisco sourdough |
| |
| [Ref.: #122417] |
Sample type/isolated from |
Food, San Francisco sour dough |
| [Ref.: #122417] |
Country |
United States of America |
| [Ref.: #122417] |
Country ISO 3 Code |
USA |
| [Ref.: #122417] |
Continent |
North America |
|
* marker position based on {}
|
|
Isolation sources categories |
| #Engineered |
#Food production |
#Food |
|
 |
-
Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
| [Ref.: #67770] |
Lactobacillus sanfranciscensis gene for 16S ribosomal RNA, partial sequence |
LC483557 |
1478 |
|
1625 tax ID |
| [Ref.: #8823] |
L.sanfrancisco (ATCC 27651 T) 16S rRNA gene |
X76327 |
1572 |
|
1625 tax ID |
| [Ref.: #67770] |
L.sanfrancisco 16S rRNA gene |
X61132 |
1515 |
|
1625 tax ID |
| [Ref.: #20218] |
Lactobacillus sanfrancisco 16S ribosomal RNA |
M58830 |
1528 |
|
1625 tax ID |
* |
| [Ref.: #124043] |
Lactobacillus parabuchneri strain NS56 16S-23S ribosomal RNA intergenic spacer and 23S ribosomal RNA gene, partial sequence. |
EU161578 |
847 |
|
1625 tax ID |
* |
| [Ref.: #124043] |
Lactobacillus sanfranciscensis strain LMG 16002 16S ribosomal RNA gene, partial sequence. |
EU350220 |
1440 |
|
1625 tax ID |
* |
| [Ref.: #124043] |
Lactobacillus sanfrancisco gene for 16S ribosomal RNA, partial sequence. |
D31698 |
178 |
|
1625 tax ID |
* |
| [Ref.: #124043] |
Lactobacillus sanfranciscensis strain CIP 103252 16S ribosomal RNA gene, partial sequence; large 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence. |
AY459586 |
1112 |
|
1625 tax ID |
* |
| [Ref.: #124043] |
Lactobacillus sanfranciscensis strain CIP 103252 16S ribosomal RNA gene, partial sequence; medium 16S-23S ribosomal RNA intergenic spacer and tRNA-OTHER gene, complete sequence; and 23S ribosomal RNA gene, partial sequence. |
AY459587 |
984 |
|
1625 tax ID |
* |
| [Ref.: #124043] |
Lactobacillus sanfranciscensis strain CIP 103252 16S ribosomal RNA gene, partial sequence; small 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence. |
AY459588 |
893 |
|
1625 tax ID |
* |
| [Ref.: #124043] |
Lactobacillus sanfranciscensis gene for 16S rRNA, partial sequence, strain: JCM 5668. |
AB289297 |
667 |
|
1625 tax ID |
* |
|
|
-
Availability in culture collections
External links
| [Ref.: #8823] |
Culture collection no. |
DSM 20451, ATCC 27651, NRRL B-3934, CCUG 30143, LMG 7946, JCM 5668, BCRC 14063, CIP 103252, KCTC 3205, LMG 16002, LMG 17498, NRIC 1548, NRRL: B-3934 |
| [Ref.: #75991] |
SI-ID 3367
|
* |
 |
Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
| Metabolism |
Degradation of Wheat Germ Agglutinin during Sourdough Fermentation. |
Tovar LER, Ganzle MG |
Foods |
10.3390/foods10020340 |
2021 |
* |
| Metabolism |
Effect of Glutathione Dehydrogenase of Lactobacillus sanfranciscensis on Gluten Properties and Bread Volume in Type I Wheat Sourdough Bread. |
Xu D, Tang K, Hu Y, Xu X, Ganzle MG |
J Agric Food Chem |
10.1021/acs.jafc.8b03298 |
2018 |
* |
| Phylogeny |
Lactobacillus ixorae sp. nov., isolated from a flower (West-Indian jasmine). |
Techo S, Miyashita M, Shibata C, Tanaka N, Wisetkhan P, Visessanguan W, Tanasupawat S |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.001547 |
2016 |
* |
| Phylogeny |
Lactobacillus vespulae sp. nov., isolated from gut of a queen wasp (Vespula vulgaris). |
Hoang VA, Kim YJ, Nguyen NL, Kim SK, Yang DC |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.000420 |
2015 |
* |
| Metabolism |
The transcriptional response of Lactobacillus sanfranciscensis DSM 20451T and its tcyB mutant lacking a functional cystine transporter to diamide stress. |
Stetina M, Behr J, Vogel RF |
Appl Environ Microbiol |
10.1128/AEM.00367-14 |
2014 |
* |
| Metabolism |
Glutathione improves the cold resistance of Lactobacillus sanfranciscensis by physiological regulation. |
Zhang J, Li Y, Chen W, Du GC, Chen J |
Food Microbiol |
10.1016/j.fm.2012.04.006 |
2012 |
* |
| Metabolism |
Contribution of the NADH-oxidase (Nox) to the aerobic life of Lactobacillus sanfranciscensis DSM20451T. |
Jansch A, Freiding S, Behr J, Vogel RF |
Food Microbiol |
10.1016/j.fm.2010.08.001 |
2010 |
* |
| Metabolism |
Glutathione protects Lactobacillus sanfranciscensis against freeze-thawing, freeze-drying, and cold treatment. |
Zhang J, Du GC, Zhang Y, Liao XY, Wang M, Li Y, Chen J |
Appl Environ Microbiol |
10.1128/AEM.00026-09 |
2010 |
* |
| Metabolism |
Glutathione reductase from Lactobacillus sanfranciscensis DSM20451T: contribution to oxygen tolerance and thiol exchange reactions in wheat sourdoughs. |
Jansch A, Korakli M, Vogel RF, Ganzle MG |
Appl Environ Microbiol |
10.1128/AEM.02322-06 |
2007 |
* |
| Metabolism |
Influence of peptide supply and cosubstrates on phenylalanine metabolism of Lactobacillus sanfranciscensis DSM20451(T) and Lactobacillus plantarum TMW1.468. |
Vermeulen N, Ganzle MG, Vogel RF |
J Agric Food Chem |
10.1021/jf052733e |
2006 |
* |
| Proteome |
Comparative proteome approach to characterize the high-pressure stress response of Lactobacillus sanfranciscensis DSM 20451(T). |
Hormann S, Scheyhing C, Behr J, Pavlovic M, Ehrmann M, Vogel RF |
Proteomics |
10.1002/pmic.200402086 |
2006 |
* |
| Metabolism |
Functional characterization of the proteolytic system of Lactobacillus sanfranciscensis DSM 20451T during growth in sourdough. |
Vermeulen N, Pavlovic M, Ehrmann MA, Ganzle MG, Vogel RF |
Appl Environ Microbiol |
10.1128/AEM.71.10.6260-6266.2005 |
2005 |
* |
| Phylogeny |
Biodiversity of Lactobacillus sanfranciscensis strains isolated from five sourdoughs. |
Kitahara M, Sakata S, Benno Y |
Lett Appl Microbiol |
10.1111/j.1472-765X.2005.01678.x |
2005 |
* |
| Biotechnology |
Barotolerance is inducible by preincubation under hydrostatic pressure, cold-, osmotic- and acid-stress conditions in Lactobacillus sanfranciscensis DSM 20451T. |
Scheyhing CH, Hormann S, Ehrmann MA, Vogel RF |
Lett Appl Microbiol |
10.1111/j.1472-765X.2004.01578.x |
2004 |
* |
| Genetics |
Characterisation of IS153, an IS3-family insertion sequence isolated from Lactobacillus sanfranciscensis and its use for strain differentiation. |
Ehrmann MA, Vogel RE |
Syst Appl Microbiol |
10.1078/0723-2020-00057 |
2001 |
* |
| Enzymology |
Maltose metabolism of Lactobacillus sanfranciscensis: cloning and heterologous expression of the key enzymes, maltose phosphorylase and phosphoglucomutase. |
Ehrmann MA, Vogel RF |
FEMS Microbiol Lett |
10.1111/j.1574-6968.1998.tb13302.x |
1998 |
* |
|
Effect of Mixed Cultures of Yeast and Lactobacilli on the Quality of Wheat Sourdough Bread. |
Xu D, Zhang Y, Tang K, Hu Y, Xu X, Ganzle MG |
Front Microbiol |
10.3389/fmicb.2019.02113 |
2019 |
* |
|
References
-
| #8823 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20451
|
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-
-
| #35517 |
; Curators of the CIP;
|
-
| #49936 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 30143
|
-
-
| #67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
| #68371 |
Automatically annotated from API 50CH acid .
|
-
| #68382 |
Automatically annotated from API zym .
|
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| #69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
| #75991 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID3367.1 )
|
-
| #122417 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 103252
|
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| #124043 |
Isabel Schober, Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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