Name: Halomonas vilamensis SV325
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6077

Type strain:

Species: Halomonas vilamensis

Strain Designation: SV325

Culture col. no.: DSM 21020, LMG 24332

Strain history: <- J. Menes, Univ. Montevideo, Uruguay; SV325

NCBI tax ID(s): 531309 (species)

SI-ID 398158

DSM 21020

Special Collections

Section

Halomonas vilamensis SV325 is an aerobe, Gram-negative, motile bacterium that was isolated from sediment of a hypersaline lake.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Halomonadaceae*
	Genus	*Halomonas*
	Species	**Halomonas vilamensis**
	Full Scientific Name (LPSN)	Halomonas vilamensis Menes et al. 2011

Synonym

"Vreelandella vilamensis"

Information on morphological and physiological properties Morphology

[Ref.: #29867]	Gram stain	negative

[Ref.: #29867]	Cell length	3 µm

[Ref.: #29867]	Cell width	1.3 µm

[Ref.: #29867]	Cell shape	rod-shaped

[Ref.: #29867]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15513]

Culture medium

MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b)

[Ref.: #15513]

Culture medium growth

[Ref.: #15513]

Culture medium link

Medium recipe at MediaDive

[Ref.: #15513]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15513]	growth	28 °C
[Ref.: #29867]	growth	05-40 °C
[Ref.: #29867]	optimum	30 °C

	pH	Kind of pH		pH
[Ref.: #29867]			optimum	7.5
[Ref.: #29867]			growth	05-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29867]

Oxygen tolerance

aerobe

[Ref.: #29867]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29867]		NaCl		growth	01-25	%
[Ref.: #29867]		NaCl		optimum	7.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29867]	acetate ChEBI	+	carbon source
[Ref.: #29867]	alanine ChEBI	+	carbon source
[Ref.: #29867]	aspartate ChEBI	+	carbon source
[Ref.: #29867]	gelatin ChEBI	+	carbon source
[Ref.: #29867]	glycine ChEBI	+	carbon source
[Ref.: #29867]	malate ChEBI	+	carbon source
[Ref.: #29867]	malonate ChEBI	+	carbon source
[Ref.: #29867]	nitrate ChEBI	+	reduction
[Ref.: #29867]	proline ChEBI	+	carbon source
[Ref.: #29867]	succinate ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #29867]	catalase	+	1.11.1.6
[Ref.: #29867]	cytochrome oxidase	+	1.9.3.1
[Ref.: #29867]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15513]	Sample type/isolated from	sediment of a hypersaline lake
[Ref.: #15513]	Geographic location (country and/or sea, region)	Andean Puna desert, Jujuy, Laguna Vilama (22° 35' S 66° 55' W, 4600 m above sea level)
[Ref.: #15513]	Country	Argentina
[Ref.: #15513]	Country ISO 3 Code	ARG
[Ref.: #15513]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment
#Condition	#Saline	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15513]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #15513]	Halomonas vilamensis strain SV325 16S ribosomal RNA gene, partial sequence	EU557315	1430	GenBank ENA	531309 tax ID

[Ref.: #15513]	GC-content	55.0 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29867]	GC-content	55 mol%

Availability in culture collections External links

[Ref.: #15513]

Culture collection no.

DSM 21020, LMG 24332

[Ref.: #75564]

SI-ID 398158

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halomonas vilamensis sp. nov., isolated from high-altitude Andean lakes.	Menes RJ, Viera CE, Farias ME, Seufferheld MJ	Int J Syst Evol Microbiol	10.1099/ijs.0.023150-0	2010	*

References

#15513

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21020

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29867

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26241 (see below)

#75564

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398158.1 )

#26241

IJSEM 1211 2011 ( DOI 10.1099/ijs.0.023150-0 , PubMed 20584819 )

* These data were automatically processed and therefore are not curated

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