Halomonas utahensis 65 | Type strain | DSM 3051, III 65, IAM 14440

Strain identifier

BacDive ID: 6025

Type strain:

Species: Halomonas utahensis

Strain Designation: 65

Culture col. no.: DSM 3051, III 65, IAM 14440

Strain history: <- C. Fendrich, TU Braunschweig

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Safety information
Sequence information

External links

Halomonas utahensis 65 is a mesophilic bacterium that was isolated from hypersaline surface water.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Gammaproteobacteria
	Order	Oceanospirillales
	Family	Halomonadaceae
	Genus	Halomonas
	Species	Halomonas utahensis
	Full Scientific Name (PNU)	Halomonas utahensis Sorokin and Tindall 2006

Synonym

Pseudomonas halophila

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #1286]

Culture medium

MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b), add 6% NaCl

[Ref.: #1286]

Culture medium growth

[Ref.: #1286]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #1286]

Culture medium

HALOVIBRIO VARIABILIS MEDIUM (DSMZ Medium 598)

[Ref.: #1286]

Culture medium growth

[Ref.: #1286]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #40186]

Culture medium

MEDIUM 286 - for Halomonas variabilis

[Ref.: #40186]

Culture medium growth

[Ref.: #40186]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1286]			growth	30 ̊C
[Ref.: #40186]			growth	30 ̊C

[Ref.: #1286]	Temperature range	mesophilic
[Ref.: #40186]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #1286]	Sample type/isolated from	hypersaline surface water
[Ref.: #1286]	Geographic location (country and/or sea, region)	Utah, Great salt lake of the north Arm
[Ref.: #1286]	Country	USA
[Ref.: #1286]	Country ISO 3 Code	USA
[Ref.: #1286]	Continent	North America

Isolation sources categories

#Environmental	#Aquatic	#Surface water
#Condition	#Saline	-

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsSafety information

[Ref.: #1286]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Halovibrio variabilis (DSM 3051) 16S ribosomal RNA (16S rRNA) gene	M93357	1470	ENA	31910 tax ID	*
[Ref.: #20218]	Halomonas variabilis genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 873	AB367223	873	ENA	31910 tax ID	*
[Ref.: #20218]	Halomonas variabilis genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 1387	AB367224	1387	ENA	31910 tax ID	*
[Ref.: #20218]	Halomonas variabilis gene for 16S rRNA, partial sequence, strain: NBRC 102410	AB681766	1458	ENA	31910 tax ID	*
[Ref.: #1286]	Halomonas variabilis partial 16S rRNA gene, strain DSM 3051	AJ306893	1528	ENA	31910 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Halomonas utahensis P-halo	GCA_900162675	scaffold	GenBank	86177 tax ID	*
[Ref.: #66792]	Halomonas utahensis 22507_15_FS	GCA_009856365	contig	GenBank	86177 tax ID	*
[Ref.: #66792]	Halomonas utahensis strain 22507_15_FS	86177.7	wgs	PATRIC	86177 tax ID	*
[Ref.: #66792]	Pseudomonas halophila strain P-halo	86177.4	wgs	PATRIC	86177 tax ID	*

[Ref.: #1286]

GC-content

58 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collectionsExternal links

[Ref.: #1286]

Culture collection no.

DSM 3051, III 65, IAM 14440

[Ref.: #20218]

Associated Passport(s) in StrainInfo

113992, 346276

References

#1286

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3051

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40186 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These References are textmined

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