Name: Halomonas salina F8-11
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6018

Type strain:

Species: Halomonas salina

Strain Designation: F8-11

Culture col. no.: DSM 5928, ATCC 49509, IAM 14438, JCM 21221, CECT 5288, CIP 106092, NCIMB 13605

Strain history: IAM 14438 <-- ATCC 49509 <-- M. J. Valderrama F8-11.

NCBI tax ID(s): 42565 (species)

Section

Halomonas salina F8-11 is a mesophilic bacterium that was isolated from saline soil.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Halomonadaceae*
	Genus	*Halomonas*
	Species	**Halomonas salina**
	Full Scientific Name (PNU)	Halomonas salina (Valderrama et al. 1991) Dobson and Franzmann 1996

Synonym

Deleya salina

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2369]

Culture medium

MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b)

[Ref.: #2369]

Culture medium growth

[Ref.: #2369]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #2369]

Culture medium composition

expand / minimize

[Ref.: #2369]

Culture medium

10% MH MEDIUM (DSMZ Medium 593)

[Ref.: #2369]

Culture medium growth

[Ref.: #2369]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #2369]

Culture medium composition

expand / minimize

[Ref.: #40291]

Culture medium

MEDIUM 318 - for Halomonas eurihalina

[Ref.: #40291]

Culture medium growth

[Ref.: #40291]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #2369]	growth	30 °C
[Ref.: #2369]	growth	30-35 °C
[Ref.: #40291]	growth	30 °C
[Ref.: #67770]	growth	25 °C

[Ref.: #2369]	Temperature range	mesophilic
[Ref.: #40291]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2369]	Sample type/isolated from	saline soil
[Ref.: #2369]	Geographic location (country and/or sea, region)	Alicante
[Ref.: #2369]	Country	Spain
[Ref.: #2369]	Country ISO 3 Code	ESP
[Ref.: #2369]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Hypersaline soil near Mediterranean Sea coast near Alicante
[Ref.: #67770]	Country	Spain
[Ref.: #67770]	Country ISO 3 Code	ESP
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2369]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Halomonas salina mRNA for 16S ribosomal RNA (partial), strain ATCC 49509	AJ243447	1493	ENA	42565 tax ID	*
[Ref.: #20218]	Deleya salina 16S ribosomal RNA (16S rRNA) gene	L42617	1443	ENA	42565 tax ID	*
[Ref.: #20218]	D.salina 16S rRNA gene	X87217	1478	ENA	42565 tax ID	*
[Ref.: #2369]	Halomonas salina mRNA for 16S ribosomal RNA (partial), strain DSM 5928	AJ243448	1493	ENA	42565 tax ID

[Ref.: #67770]

GC-content

64.2 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #2369]

Culture collection no.

DSM 5928, ATCC 49509, IAM 14438, JCM 21221, CECT 5288, CIP 106092, NCIMB 13605

[Ref.: #20218]

Associated Passport(s) in StrainInfo

151622, 114426, 151623

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Re-examining the 16S rDNA sequence of Halomonas salina.	Baumgarte S, Moore ER, Tindall BJ	Int J Syst Evol Microbiol	10.1099/00207713-51-1-51	2001	*
Phylogeny	Structural elucidation of a novel phosphoglycolipid isolated from six species of Halomonas.	Giordano A, Vella FM, Romano I, Gambacorta A	J Lipid Res	10.1194/jlr.M700152-JLR200	2007	*
Cultivation	Efficient production of ectoine using ectoine-excreting strain.	Zhang LH, Lang YJ, Nagata S	Extremophiles	10.1007/s00792-009-0262-2	2009	*
Biotechnology	Production of ectoine through a combined process that uses both growing and resting cells of Halomonas salina DSM 5928T.	Lang YJ, Bai L, Ren YN, Zhang LH, Nagata S	Extremophiles	10.1007/s00792-011-0360-9	2011	*
Phylogeny	Halomonas smyrnensis sp. nov., a moderately halophilic, exopolysaccharide-producing bacterium.	Poli A, Nicolaus B, Denizci AA, Yavuzturk B, Kazan D	Int J Syst Evol Microbiol	10.1099/ijs.0.037036-0	2012	*
Metabolism	[Construction of ectoine absorption defective mutant for efficient ectoine production].	Xu R, Zhang L	Wei Sheng Wu Xue Bao		2012	*
Metabolism	Exploring the additive bio-agent impacts upon ectoine production by Halomonas salina DSM5928(T) using corn steep liquor and soybean hydrolysate as nutrient supplement.	Chen PW, Cui ZY, Ng HS, Chi-Wei Lan J	J Biosci Bioeng	10.1016/j.jbiosc.2020.03.011	2020	*

References

#2369

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5928

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40291 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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