Cobetia marina (DSM 4741, ATCC 25374, NCIMB 1877)

Name: Cobetia marina (DSM 4741, ATCC 25374, NCIMB 1877)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6002

Type strain

Culture col. no. DSM 4741 ATCC 25374 NCIMB 1877 NBRC 102605 LMG 2217 5 more

NCBI tax ID(s) 28258

Special Collections DSMZ CCUG JCM CIP

History <- ATCC <- A.B. Cobet <- G. Jones <- C. Wirsen IAM 14107 <-- ATCC 25374 <-- A. B. Cobet ("Arthrobacter marinus") <-- G. Jones <-- C. Wirsen. CIP <- 1996, NCIMB <- G.E. Jones, Arthrobacter marinus

Links

Cobetia marina DSM 4741 is an obligate aerobe, mesophilic, Gram-negative prokaryote that was isolated from seawater.

Gram-negative motile obligate aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 2165

LMG 2217,ATCC 25374,DSM 4741,NCMB 1877,CIP 104765,NCIMB 1877,IAM14107,CECT 4278,CCUG 16090,CCUG 49558,NBRC 102605,JCM 21022

@ref 20215

Last LPSN update 2026-02-09 11:19:06

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Halomonadaceae

Genus Cobetia

Species Cobetia marina

Full scientific name Cobetia marina (Cobet et al. 1970) Arahal et al. 2002

Synonyms (6)

Halomonas halodurans
Cobetia pacifica
Pseudomonas marina
Halomonas marina
Deleya marina
"Arthrobacter marinus"

BacDive ID	Other strains from **Cobetia marina** (9)	Type strain
6003	C. marina C-1, DSM 5160, ATCC 29686
6004	C. marina C-1, DSM 15425, ATCC 29686, LMG 10144
6005	C. marina A 140, DSM 50416, ATCC 27129, ICPB 3528, ...
135084	C. marina CIP 107853
143004	C. marina CCUG 16091, LMG 6842
143005	C. marina CCUG 16093
143006	C. marina CCUG 16095, ATCC 35142, JCM 21023, IAM 14108
161216	C. marina JCM 12325
163075	C. marina JCM 21027, IAM 14114

Morphology

Cell morphology

@ref	Gram stain	Confidence
120797	negative
125439		90.5
125439	negative	99.5
125438	negative	100

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1747	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
39090	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
120797	CIP Medium 13	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1747	positive	growth	25	mesophilic
39090	positive	growth	25	mesophilic
67770	positive	growth	25	mesophilic
120797	positive	growth	5-41
120797	negative	growth	45

Physiology and metabolism

Oxygen tolerance

120797

Oxygen toleranceobligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		99.3
125438		93.323

Halophily

@ref	Salt	Growth	Tested relation	Concentration
120797	NaCl	positive	growth	2-10 %
120797	NaCl		growth	0 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
120797	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
120797	606565 ChEBI	hippurate	-	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
120797	15792 ChEBI	malonate	+	assimilation
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
120797	17632 ChEBI	nitrate	-	reduction
120797	17632 ChEBI	nitrate	-	respiration
120797	16301 ChEBI	nitrite	-	reduction
120797	15882 ChEBI	phenol	-	degradation
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
120797	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
120797	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120797	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
120797	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120797	caseinase	-	3.4.21.50
120797	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
120797	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120797	gamma-glutamyltransferase	+	2.3.2.2
120797	gelatinase	-
120797	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
120797	lipase	-
68382	lipase (C 14)	-		from API zym
120797	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120797	ornithine decarboxylase	-	4.1.1.17
120797	oxidase	-
120797	protease	-
68382	trypsin	-	3.4.21.4	from API zym
120797	tryptophan deaminase	-
120797	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120797	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
120797	not determinedn.d.	-	-	-	-	-	-	-	-	-	+	+	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	+/-	-	-	+/-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120797	not determinedn.d.	+	+	+	+	-	-	-	+	-	+	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	-	+	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	+	-	+	+	-	-	+	+	-	-	-	-	-	-	-	+	+	+	+	+	+	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
1747	seawater
67770	Littoral water sample at Woods Hole	MA	USA	USA	North America
120797	Environment, Littoral seawater sample	Woods Hole, Massachusetts	United States of America	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence NR_042065 (>99% sequence identity) for Cobetia from Microbeatlas

Aquatic Samples	12909
Soil Samples	974
Animal Samples	5462
Plant Samples	226
Total Samples	19571

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1747	1	Risk group (German classification) According to TRBA 466
120797	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM172048v1 assembly for Cobetia marina JCM 21022	complete	GCA_001720485	28258.9	2751185720	28258	99.1
66792	ADCOB assembly for Cobetia marina	contig	GCA_900119965	1268241.8	2890818025	1268241	58.34

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Deleya marina (ATCC 25374) 16S ribosomal RNA (16S rRNA) gene	M93354	1483	28258
1747	Halomonas marina partial 16S rRNA gene, strain DSM 4741	AJ306890	1536	28258
1747	Cobetia marina strain DSM 4741 16S ribosomal RNA, partial sequence	NR_042065	1536	28258
67770	Cobetia marina gene for 16S rRNA, partial sequence, strain: NBRC 102605	AB681880	1466	28258

GC content

67770

GC-content (mol%)63.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Cobetia marina strain JCM 21022
PATRIC: 28258.9

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative aerobe	66.30	no
125439	gram_stain	BacteriaNetⓘ	negative	99.50	no
125439	motility	BacteriaNetⓘ	yes	90.50	no
125439	spore_formation	BacteriaNetⓘ	no	99.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Cobetia marina JCM 21022
NCBI: GCA_001720485.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	96.85	yes
125438	aerobic	aerobicⓘ	yes	84.12	yes
125438	spore-forming	spore-formingⓘ	no	93.32	no
125438	thermophilic	thermophileⓘ	no	97.50	no
125438	flagellated	motile2+ⓘ	yes	83.87	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	New Cyclam-Based Fe(III) Complexes Coatings Targeting Cobetia marina Biofilms.	Carvalho FM, Gomes LC, Teixeira-Santos R, Carapeto AP, Mergulhao FJ, Almada S, Silva ER, Alves LG.	Molecules	10.3390/molecules30040917	2025
	Graphene-Based Coating to Mitigate Biofilm Development in Marine Environments.	Sousa-Cardoso F, Teixeira-Santos R, Campos AF, Lima M, Gomes LC, Soares OSGP, Mergulhao FJ.	Nanomaterials (Basel)	10.3390/nano13030381	2023
	Structural Study of the Cobetia marina Bacteriophage 1 (Carin-1) by Cryo-EM.	d'Acapito A, Roret T, Zarkadas E, Mocaer PY, Lelchat F, Baudoux AC, Schoehn G, Neumann E.	J Virol	10.1128/jvi.00248-23	2023
Biotechnology	Novel metabolite madeirone and neomarinone extracted from Streptomyces aculeoletus as marine antibiofilm and antifouling agents.	Wissner JL, Almeida JR, Grilo IR, Oliveira JF, Brizida C, Escobedo-Hinojosa W, Pissaridou P, Vasquez MI, Cunha I, Sobral RG, Vasconcelos V, Gaudencio SP.	Front Chem	10.3389/fchem.2024.1425953	2024
Pathogenicity	Effect of ozone stress on the intracellular metabolites from Cobetia marina.	Li J, Rumancev C, Lutze HV, Schmidt TC, Rosenhahn A, Schmitz OJ.	Anal Bioanal Chem	10.1007/s00216-020-02810-6	2020
Phylogeny	Are the Closely Related Cobetia Strains of Different Species?	Noskova Y, Seitkalieva A, Nedashkovskaya O, Shevchenko L, Tekutyeva L, Son O, Balabanova L.	Molecules	10.3390/molecules26030690	2021
	Leveraging substrate flexibility and product selectivity of acetogens in two-stage systems for chemical production.	Ricci L, Seifert A, Bernacchi S, Fino D, Pirri CF, Re A.	Microb Biotechnol	10.1111/1751-7915.14172	2023
	Antifouling Napyradiomycins from Marine-Derived Actinomycetes Streptomyces aculeolatus.	Pereira F, Almeida JR, Paulino M, Grilo IR, Macedo H, Cunha I, Sobral RG, Vasconcelos V, Gaudencio SP.	Mar Drugs	10.3390/md18010063	2020
Pathogenicity	Anti-Larval and Anti-Algal Natural Products from Marine Microorganisms as Sources of Anti-Biofilm Agents.	Wang KL, Dou ZR, Gong GF, Li HF, Jiang B, Xu Y.	Mar Drugs	10.3390/md20020090	2022
Metabolism	The hydrocarbon-degrading marine bacterium Cobetia sp. strain MM1IDA2H-1 produces a biosurfactant that interferes with quorum sensing of fish pathogens by signal hijacking.	Ibacache-Quiroga C, Ojeda J, Espinoza-Vergara G, Olivero P, Cuellar M, Dinamarca MA.	Microb Biotechnol	10.1111/1751-7915.12016	2013
	Phylogenetic identification of marine bacteria isolated from deep-sea sediments of the eastern South Atlantic Ocean.	da Silva MA, Cavalett A, Spinner A, Rosa DC, Jasper RB, Quecine MC, Bonatelli ML, Pizzirani-Kleiner A, Corcao G, Lima AO.	Springerplus	10.1186/2193-1801-2-127	2013
	Exopolymeric Substances Control Microbial Community Structure and Function by Contributing to both C and Fe Nutrition in Fe-Limited Southern Ocean Provinces.	Blanco-Ameijeiras S, Cabanes DJE, Cable RN, Trimborn S, Jacquet S, Wiegmann S, Volkner C, Lelchat F, Bracher A, Duhaime MB, Hassler CS.	Microorganisms	10.3390/microorganisms8121980	2020
Metabolism	Falsirhodobacter sp. alg1 Harbors Single Homologs of Endo and Exo-Type Alginate Lyases Efficient for Alginate Depolymerization.	Mori T, Takahashi M, Tanaka R, Miyake H, Shibata T, Chow S, Kuroda K, Ueda M, Takeyama H.	PLoS One	10.1371/journal.pone.0155537	2016
	Fluid dynamics and cell-bound Psl polysaccharide allows microplastic capture, aggregation and subsequent sedimentation by Pseudomonas aeruginosa in water.	Romero M, Carabelli A, R Swift M, I Smith M.	Environ Microbiol	10.1111/1462-2920.15916	2022
	Metagenomic and Functional Characterization of Two Chilean Kefir Beverages Reveals a Dairy Beverage Containing Active Enzymes, Short-Chain Fatty Acids, Microbial beta-Amyloids, and Bio-Film Inhibitors.	Ibacache-Quiroga C, Gonzalez-Pizarro K, Charifeh M, Canales C, Diaz-Viciedo R, Schmachtenberg O, Dinamarca MA.	Foods	10.3390/foods11070900	2022
Pathogenicity	Biofilm Inhibition by Novel Natural Product- and Biocide-Containing Coatings Using High-Throughput Screening.	Salta M, Dennington SP, Wharton JA.	Int J Mol Sci	10.3390/ijms19051434	2018
Pathogenicity	Anti-biofilm performance of three natural products against initial bacterial attachment.	Salta M, Wharton JA, Dennington SP, Stoodley P, Stokes KR.	Int J Mol Sci	10.3390/ijms141121757	2013
	Causality Verification for the Correlation between the Presence of Nonstarter Bacteria and Flavor Characteristics in Soft-Type Ripened Cheeses.	Unno R, Suzuki T, Osaki Y, Matsutani M, Ishikawa M.	Microbiol Spectr	10.1128/spectrum.02894-22	2022
Genetics	In-Depth Genome Characterization and Pan-Genome Analysis of Strain KMM 296, a Producer of Highly Active Alkaline Phosphatase; Proposal for the Reclassification of Cobetia litoralis and Cobetia pacifica as the Later Heterotypic Synonyms of Cobetia amphilecti and Cobetia marina, and Emended Description of the Species Cobetia amphilecti and Cobetia marina.	Nedashkovskaya O, Balabanova L, Otstavnykh N, Zhukova N, Detkova E, Seitkalieva A, Bystritskaya E, Noskova Y, Tekutyeva L, Isaeva M.	Biomolecules	10.3390/biom14020196	2024
	Natural Benzo/Acetophenones as Leads for New Synthetic Acetophenone Hybrids Containing a 1,2,3-Triazole Ring as Potential Antifouling Agents.	Neves AR, Pereira D, Goncalves C, Cardoso J, Pinto E, Vasconcelos V, Pinto M, Sousa E, Almeida JR, Cidade H, Correia-da-Silva M.	Mar Drugs	10.3390/md19120682	2021
	From Natural Xanthones to Synthetic C-1 Aminated 3,4-Dioxygenated Xanthones as Optimized Antifouling Agents.	Resende DISP, Almeida JR, Pereira S, Campos A, Lemos A, Plowman JE, Thomas A, Clerens S, Vasconcelos V, Pinto M, Correia-da-Silva M, Sousa E.	Mar Drugs	10.3390/md19110638	2021
Pathogenicity	Flavonoid Glycosides with a Triazole Moiety for Marine Antifouling Applications: Synthesis and Biological Activity Evaluation.	Pereira D, Goncalves C, Martins BT, Palmeira A, Vasconcelos V, Pinto M, Almeida JR, Correia-da-Silva M, Cidade H.	Mar Drugs	10.3390/md19010005	2020
Pathogenicity	A Multi-Bioassay Integrated Approach to Assess the Antifouling Potential of the Cyanobacterial Metabolites Portoamides.	Antunes J, Pereira S, Ribeiro T, Plowman JE, Thomas A, Clerens S, Campos A, Vasconcelos V, Almeida JR.	Mar Drugs	10.3390/md17020111	2019
	Antifouling potential of Nature-inspired sulfated compounds.	Almeida JR, Correia-da-Silva M, Sousa E, Antunes J, Pinto M, Vasconcelos V, Cunha I.	Sci Rep	10.1038/srep42424	2017
	Cyanobacteria and Eukaryotic Microalgae as Emerging Sources of Antibacterial Peptides.	Rojas V, Rivas L, Cardenas C, Guzman F.	Molecules	10.3390/molecules25245804	2020
	The Marine Seagrass Halophila stipulacea as a Source of Bioactive Metabolites against Obesity and Biofouling.	Bel Mabrouk S, Reis M, Sousa ML, Ribeiro T, Almeida JR, Pereira S, Antunes J, Rosa F, Vasconcelos V, Achour L, Kacem A, Urbatzka R.	Mar Drugs	10.3390/md18020088	2020
Metabolism	Sphaerocyclamide, a prenylated cyanobactin from the cyanobacterium Sphaerospermopsis sp. LEGE 00249.	Martins J, Leikoski N, Wahlsten M, Azevedo J, Antunes J, Jokela J, Sivonen K, Vasconcelos V, Fewer DP, Leao PN.	Sci Rep	10.1038/s41598-018-32618-5	2018
	From broad-spectrum biocides to quorum sensing disruptors and mussel repellents: antifouling profile of alkyl triphenylphosphonium salts.	Martin-Rodriguez AJ, Babarro JM, Lahoz F, Sanson M, Martin VS, Norte M, Fernandez JJ.	PLoS One	10.1371/journal.pone.0123652	2015
Genetics	Comparative Genomics Reveals Metabolic Specificity of Endozoicomonas Isolated from a Marine Sponge and the Genomic Repertoire for Host-Bacteria Symbioses.	Alex A, Antunes A.	Microorganisms	10.3390/microorganisms7120635	2019
	Cobetia sp. Bacteria, Which Are Capable of Utilizing Alginate or Waste Laminaria sp. for Poly(3-Hydroxybutyrate) Synthesis, Isolated From a Marine Environment.	Moriya H, Takita Y, Matsumoto A, Yamahata Y, Nishimukai M, Miyazaki M, Shimoi H, Kawai SJ, Yamada M.	Front Bioeng Biotechnol	10.3389/fbioe.2020.00974	2020
Metabolism	High natural PHA production from acetate in Cobetia sp. MC34 and Cobetia marina DSM 4741(T) and in silico analyses of the genus specific PhaC2 polymerase variant.	Christensen M, Jablonski P, Altermark B, Irgum K, Hansen H	Microb Cell Fact	10.1186/s12934-021-01713-0	2021
Pathogenicity	Combinatorial materials research applied to the development of new surface coatings III. Utilisation of a high-throughput multiwell plate screening method to rapidly assess bacterial biofilm retention on antifouling surfaces.	Stafslien S, Daniels J, Chisholm B, Christianson D	Biofouling	10.1080/08927010601127311	2007
Phylogeny	Proposal of Cobetia marina gen. nov., comb. nov., within the family Halomonadaceae, to include the species Halomonas marina.	Arahal DR, Castillo AM, Ludwig W, Schleifer KH, Ventosa A	Syst Appl Microbiol	10.1078/0723-2020-00113	2002
Enzymology	Novel diglycosyldiacylglycerol from the gram-negative bacterium Deleya marina.	Yagi H, Maruyama A	Biochim Biophys Acta	10.1016/s0005-2760(98)00070-8	1998
Metabolism	N-acyl amino acid biosynthesis in marine bacterium, Deleya marina.	Yagi H, Corzo G, Nakahara T	Biochim Biophys Acta	10.1016/s0304-4165(97)00009-3	1997
	Inhibition of larval barnacle attachment to bacterial films: An investigation of physical properties.	Maki JS, Rittschof D, Mitchell R	Microb Ecol	10.1007/BF00165910	1992
Phenotype	Comparison of the adhesion properties of Deleya marina and the exopolysaccharide-defective mutant strain DMR.	Shea C, Nunley JW, Williamson JC, Smith-Somerville HE	Appl Environ Microbiol	10.1128/aem.57.11.3107-3113.1991	1991
Phylogeny	Description of Cobetia amphilecti sp. nov., Cobetia litoralis sp. nov. and Cobetia pacifica sp. nov., classification of Halomonas halodurans as a later heterotypic synonym of Cobetia marina and emended descriptions of the genus Cobetia and Cobetia marina.	Romanenko LA, Tanaka N, Svetashev VI, Falsen E	Int J Syst Evol Microbiol	10.1099/ijs.0.036863-0	2012
Phylogeny	Cobetia crustatorum sp. nov., a novel slightly halophilic bacterium isolated from traditional fermented seafood in Korea.	Kim MS, Roh SW, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.008847-0	2009

References

#1747	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4741
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39090	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120797	Collection of Institut Pasteur ; Curators of the CIP; CIP 104765
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Cobetia marina (DSM 4741, ATCC 25374, NCIMB 1877)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001720485

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media