Chryseobacterium indoltheticum (DSM 16778, ATCC 27950, CCUG 33445)

Name: Chryseobacterium indoltheticum (DSM 16778, ATCC 27950, CCUG 33445)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5672

Type strain

Strain Designation F37

Culture col. no. DSM 16778 ATCC 27950 CCUG 33445 CIP 103168 LMG 4025 2 more

NCBI tax ID(s) 254

Special Collections DSMZ CCUG CIP

History <- CIP <- NCIMB <- ATCC <- O. B. Weeks; F37 <- O. B. Williams CIP <- 1988, NCIMB, Flavobacterium indoltheticum <- ATCC <- O.B. Weeks: strain F37 <- O.B. Williams

Links

Chryseobacterium indoltheticum F37 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from marine mud.

Gram-negative rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 2825

LMG 4025,ATCC 27950,NCIMB 2220,NCMB 2220,CCUG 33445,CIP 103168,CCM 4452,KCTC 2920,BCRC 17333,CCRC 17333,DSM 16778

@ref 20215

Last LPSN update 2026-02-09 11:19:01

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Weeksellaceae

Genus Chryseobacterium

Species Chryseobacterium indoltheticum

Full scientific name Chryseobacterium indoltheticum (Campbell and Williams 1951) Vandamme et al. 1994

Synonyms (1)

Flavobacterium indoltheticum

BacDive ID	Other strains from **Chryseobacterium indoltheticum** (1)	Type strain
137024	C. indoltheticum CIP 109965

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
120098	negative	rod-shaped
125439	negative		99.7
125438			90
125438	negative		99.455

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6581	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
35499	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
120098	CIP Medium 72	Medium recipe at CIP
120098	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6581	positive	growth	30
35499	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
120098	obligate aerobe
125439	obligate aerobe	94.4

Spore formation

@ref	Spore formation	Confidence
125439		96.8

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68369	25115 ChEBI	malate	-	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
120098	17632 ChEBI	nitrate	-	reduction
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
120098	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
120098	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120098	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	+		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120098	oxidase	+
68382	trypsin	+	3.4.21.4	from API zym
120098	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

Fatty acid profile

Metadata FA analysis

@ref

51524

Fatty acid	Percentage	ECL
C15:0 ISO	35.5	14.621
C17:1 ω9c ISO	24.1	16.416
C16:1 ω7c/C15:0 ISO 2OH	13.1	15.85
C17:0 iso 3OH	8.2	18.161
unknown 13.566	7.5	13.566
C15:0 ANTEISO	5	14.711
C15:0 ISO 3OH	3	16.135
C17:0 2OH	1	18.249
C18:2 ω6,9c/C18:0 ANTE	0.8	17.724

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120098	-	+	+	+	-	+	+	+	+	+	+	+	-	-	-	+	+	+	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
51524	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
120098	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+/-	-	+/-	-	-	-	-	-	-	-	-	-	+/-	-	+	-	+/-	+/-	-	-	-	-	-	-	-	+/-	-	-	+/-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Mud (Sludge)
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type
6581	marine mud
51524	Marine mud
120098	Environment, Marine mud

Taxonmaps

69479

Global distribution of 16S sequence AY468448 (>99% sequence identity) for Chryseobacterium indoltheticum from Microbeatlas

Aquatic Samples	177
Soil Samples	309
Animal Samples	552
Plant Samples	760
Total Samples	1798

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6581	1	Risk group (German classification) According to TRBA 466
120098	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM381591v1 assembly for Chryseobacterium indoltheticum ATCC 27950	complete	GCA_003815915			254	96.96
66792	IMG-taxon 2681813551 annotated assembly for Chryseobacterium indoltheticum ATCC 27950	scaffold	GCA_900156145	254.4	2681813551	254	71.37

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Chryseobacterium indoltheticum 16S ribosomal RNA gene, partial sequence	M58774	1461		254
6581	Chryseobacterium indoltheticum strain LMG 4025 16S ribosomal RNA gene, partial sequence	AY468448	1442		254

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Chryseobacterium indoltheticum ATCC 27950
NCBI: GCA_003815915

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	96.80	no
125439	motility	BacteriaNetⓘ	no	74.20	no
125439	gram_stain	BacteriaNetⓘ	negative	99.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Chryseobacterium indoltheticum ATCC 27950
NCBI: GCA_003815915.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.46	no
125438	anaerobic	anaerobicⓘ	no	96.28	yes
125438	aerobic	aerobicⓘ	yes	86.03	yes
125438	spore-forming	spore-formingⓘ	no	89.80	no
125438	thermophilic	thermophileⓘ	no	97.58	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Genome Sequence of Flavobacteriaceae Strain W22, Isolated from a Tree Hole Mosquito Habitat.	Chen S, Walker ED.	Microbiol Resour Announc	10.1128/mra.00008-20	2020
Phylogeny	New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon.	O'Sullivan LA, Weightman AJ, Fry JC.	Appl Environ Microbiol	10.1128/aem.68.1.201-210.2002	2002
	The integrative and conjugative element ICECiPOL15 mediates horizontal transfer of beta-lactam resistance gene in Chryseobacterium indoltheticum POL15.	Zhu X, Wang X, Wang F, Tian X, Pang J.	J Glob Antimicrob Resist	10.1016/j.jgar.2023.12.028	2024
	Uncovering the secret weapons of an invasive plant: The endophytic microbes of Anthemis cotula.	Bashir I, War AF, Rafiq I, Reshi ZA, Rashid I, Shouche YS.	Heliyon	10.1016/j.heliyon.2024.e29778	2024
	Co-occurrence of antibiotic and metal resistance in long-term sewage sludge-amended soils: influence of application rates and pedo-climatic conditions.	Mokni-Tlili S, Hechmi S, Ouzari HI, Mechergui N, Ghorbel M, Jedidi N, Hassen A, Hamdi H.	Environ Sci Pollut Res Int	10.1007/s11356-022-23802-2	2023
	Isolation, identification, and environmental adaptability of heavy-metal-resistant bacteria from ramie rhizosphere soil around mine refinery.	Jiang J, Pan C, Xiao A, Yang X, Zhang G.	3 Biotech	10.1007/s13205-017-0603-2	2017
	The microbial RNA metagenome of Aedes albopictus (Diptera: Culicidae) from Germany.	Rau J, Werner D, Beer M, Hoper D, Kampen H.	Parasitol Res	10.1007/s00436-022-07576-7	2022
	Selective Isolation and Identification of Microorganisms with Dual Capabilities: Leather Biodegradation and Heavy Metal Resistance for Industrial Applications.	Bonilla-Espadas M, Zafrilla B, Lifante-Martinez I, Camacho M, Orgiles-Calpena E, Aran-Ais F, Bertazzo M, Bonete MJ.	Microorganisms	10.3390/microorganisms12051029	2024
	Probiotic Lactobacillus rhamnosus GG Induces Alterations in Ileal Microbiota With Associated CD3^-CD19^-T-bet⁺IFNgamma^+/- Cell Subset Homeostasis in Pigs Challenged With Salmonella enterica Serovar 4,[5],12:i:.	Zhang W, Wu Q, Zhu Y, Yang G, Yu J, Wang J, Ji H.	Front Microbiol	10.3389/fmicb.2019.00977	2019
Phylogeny	Community composition and cellulase activity of cellulolytic bacteria from forest soils planted with broad-leaved deciduous and evergreen trees.	Yang JK, Zhang JJ, Yu HY, Cheng JW, Miao LH.	Appl Microbiol Biotechnol	10.1007/s00253-013-5130-4	2014
	Microbial Dynamics during labneh Ambaris Production in Earthenware Jars.	Abi Khalil R, Couderc C, Yvon S, Sicard D, Bigey F, Jard G, El Rammouz R, Abi Nakhoul P, Eutamene H, Ayoub MJ, Tormo H.	Foods	10.3390/foods12163131	2023
Pathogenicity	The Potential Prebiotic Berberine Combined With Methimazole Improved the Therapeutic Effect of Graves' Disease Patients Through Regulating the Intestinal Microbiome.	Han Z, Cen C, Ou Q, Pan Y, Zhang J, Huo D, Chen K.	Front Immunol	10.3389/fimmu.2021.826067	2021
Enzymology	Effects of bovine milk lactoperoxidase system on some bacteria.	Cankaya M, Sisecioglu M, Baris O, Gulluce M, Ozdemir H.	Prikl Biokhim Mikrobiol	10.1134/s0003683810010096	2010
	Dynamics of Bacterial and Fungal Communities and Metabolites During Aerobic Exposure in Whole-Plant Corn Silages With Two Different Moisture Levels.	Bai C, Wang C, Sun L, Xu H, Jiang Y, Na N, Yin G, Liu S, Xue Y.	Front Microbiol	10.3389/fmicb.2021.663895	2021
Phylogeny	The sources and transmission routes of microbial populations throughout a meat processing facility.	Zwirzitz B, Wetzels SU, Dixon ED, Stessl B, Zaiser A, Rabanser I, Thalguter S, Pinior B, Roch FF, Strachan C, Zanghellini J, Dzieciol M, Wagner M, Selberherr E.	NPJ Biofilms Microbiomes	10.1038/s41522-020-0136-z	2020
	Common cuckoos (Cuculus canorus) affect the bacterial diversity of the eggshells of their great reed warbler (Acrocephalus arundinaceus) hosts.	Geltsch N, Elek Z, Manczinger L, Vagvolgyi C, Moskat C.	PLoS One	10.1371/journal.pone.0191364	2018
	Preliminary differentiation of food strains of Chryseobacterium and Empedobacter using multilocus enzyme electrophoresis	Hugo CJ, Jooste PJ.	Food Microbiol	10.1006/fmic.1996.0069	1997
Biotechnology	Characterization of rhizosphere and endophytic bacteria from roots of maize (Zea mays L.) plant irrigated with wastewater with biotechnological potential in agriculture.	Abedinzadeh M, Etesami H, Alikhani HA.	Biotechnol Rep (Amst)	10.1016/j.btre.2019.e00305	2019
Pathogenicity	Influence of lipopolysaccharides and lipids A from some marine bacteria on spontaneous and Escherichia coli LPS-induced TNF-alpha release from peripheral human blood cells.	Vorobeva EV, Krasikova IN, Solov'eva TF	Biochemistry (Mosc)	10.1134/s000629790607008x	2006
Phylogeny	Chryseobacterium taihuense sp. nov., isolated from a eutrophic lake, and emended descriptions of the genus Chryseobacterium, Chryseobacterium taiwanense, Chryseobacterium jejuense and Chryseobacterium indoltheticum.	Wu YF, Wu QL, Liu SJ.	Int J Syst Evol Microbiol	10.1099/ijs.0.040337-0	2013
Phylogeny	Chryseobacterium soldanellicola sp. nov. and Chryseobacterium taeanense sp. nov., isolated from roots of sand-dune plants.	Park MS, Jung SR, Lee KH, Lee MS, Do JO, Kim SB, Bae KS.	Int J Syst Evol Microbiol	10.1099/ijs.0.63825-0	2006
Phylogeny	Chryseobacterium formosense sp. nov., isolated from the rhizosphere of Lactuca sativa L. (garden lettuce).	Young CC, Kampfer P, Shen FT, Lai WA, Arun AB.	Int J Syst Evol Microbiol	10.1099/ijs.0.63331-0	2005
Phylogeny	Chryseobacterium defluvii sp. nov., isolated from wastewater.	Kampfer P, Dreyer U, Neef A, Dott W, Busse HJ.	Int J Syst Evol Microbiol	10.1099/ijs.0.02073-0	2003
Phylogeny	DNA-DNA hybridization study of strains of Chryseobacterium, Elizabethkingia and Empedobacter and of other usually indole-producing non-fermenters of CDC groups IIc, IIe, IIh and IIi, mostly from human clinical sources, and proposals of Chryseobacterium bernardetii sp. nov., Chryseobacterium carnis sp. nov., Chryseobacterium lactis sp. nov., Chryseobacterium nakagawai sp. nov. and Chryseobacterium taklimakanense comb. nov.	Holmes B, Steigerwalt AG, Nicholson AC.	Int J Syst Evol Microbiol	10.1099/ijs.0.054353-0	2013
Phylogeny	Chryseobacterium mulctrae sp. nov., isolated from raw cow's milk.	Yoon SH, Lee JE, Han RH, Kwon M, Kim GB	Int J Syst Evol Microbiol	10.1099/ijsem.0.003647	2019
Phylogeny	Chryseobacterium formosus sp. nov., a bacterium isolated from an ancient tree trunk.	Akter S, NGO HT, Du J, Won K, Singh H, Yin CS, Kook M, Yi TH	Arch Microbiol	10.1007/s00203-015-1137-9	2015
Phylogeny	Chryseobacterium solani sp. nov., isolated from field-grown eggplant rhizosphere soil.	Du J, Ngo HTT, Won K, Kim KY, Jin FX, Yi TH	Int J Syst Evol Microbiol	10.1099/ijs.0.000266	2015
Phylogeny	Chryseobacterium ginsengisoli sp. nov., isolated from the rhizosphere of ginseng and emended description of Chryseobacterium gleum.	Nguyen NL, Kim YJ, Hoang VA, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.045427-0	2013
Phylogeny	Chryseobacterium ginsenosidimutans sp. nov., a bacterium with ginsenoside-converting activity isolated from soil of a Rhus vernicifera-cultivated field.	Im WT, Yang JE, Kim SY, Yi TH	Int J Syst Evol Microbiol	10.1099/ijs.0.023614-0	2010
Phylogeny	Chryseobacterium aquaticum sp. nov., isolated from a water reservoir.	Kim KK, Lee KC, Oh HM, Lee JS	Int J Syst Evol Microbiol	10.1099/ijs.0.65491-0	2008

References

#6581	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16778
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#35499	; Curators of the CIP;
#51524	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33445
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68369	Automatically annotated from API 20NE .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120098	Collection of Institut Pasteur ; Curators of the CIP; CIP 103168
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Chryseobacterium indoltheticum (DSM 16778, ATCC 27950, CCUG 33445)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Fatty acid profile

API zym

API 20NE

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003815915

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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