Name: Chryseobacterium sp. DSM 5567
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5666

Type strain:

Species: Chryseobacterium sp.

Culture col. no.: DSM 5567, ATCC 29898, NCTC 10797

Strain history: <- ATCC (Flavobacterium sp.) <- CDC <- F. Fargo. Deposited as a strain of Chryseobacterium gleum

NCBI tax ID(s): 1871047 (species)

SI-ID 7840

LMG 12430, ATCC 29898, CCUG 11879, LMG 8336, NCTC 10797, DSM 5567, CCM 2721

Other strains from Chryseobacterium sp.

C. sp. Lo1, DSM 2810
C. sp. Lo16, DSM 2811
C. sp. ES2-W7a2, DSM 30639
C. sp. PB2, DSM 18018
C. sp. 5516J-09, DSM 18120, KACC 11421
C. sp. NF4, DSM 22579
C. sp. B2, DSM 19974
C. sp. S5, DSM 19976
C. sp. Leaf180, DSM 102587
C. sp. Leaf201, DSM 102588
C. sp. Leaf394, DSM 102589
C. sp. Leaf405, DSM 102590
C. sp. Leaf404, DSM 102591
C. sp. Leaf313, DSM 102592
C. sp. VM-7, DSM 22218
C. sp. CIP 111071, CIP 200678
C. sp. H30, DSM 19054, LMG 24031
C. sp. 216, DSM 26353
C. sp. JW2, DSM 26614, KACC 16690
C. sp. AG2-9, DSM 26908
C. sp. CCUG 13647, LMG 8324
C. sp. CCUG 19413
C. sp. CCUG 33723
C. sp. CCUG 34218
C. sp. CCUG 34605
C. sp. CCUG 34606
C. sp. CCUG 34607
C. sp. CCUG 35920
C. sp. CCUG 37346
C. sp. CCUG 50314
C. sp. CCUG 56852
C. sp. CCUG 57353
C. sp. CCUG 59878
C. sp. CCUG 60106
C. sp. JCM 10535
C. sp. JCM 16079
C. sp. JCM 17078
C. sp. JCM 18517, KCTC 32089
C. sp. JCM 28258
C. sp. JCM 28269
C. sp. JCM 28306
C. sp. JCM 28637

Section

Chryseobacterium sp. DSM 5567 is a mesophilic, Gram-negative bacterium that was isolated from drinking fountain.

Gram-negative
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Chryseobacterium*
	Full Scientific Name (LPSN)	Chryseobacterium Vandamme et al. 1994

	Synonym	Halpernia
	Synonym	Sejongia
	Synonym	Soonwooa
	Synonym	Kaistella
	Synonym	Planobacterium
	Synonym	Epilithonimonas

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.988

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2223]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #2223]

Culture medium growth

[Ref.: #2223]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2223]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2223]			growth	30 °C

[Ref.: #2223]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Reference

[Ref.: #2223]
Mueller-Hinton Agar



yes
Inhibition zone diameter in mm
20
10-12
18
34
40-42
22
14
32-34
resistant0
40
32
34-36
10
10
24
26
34
40
32-34
10
24-26
28
10-12
14
24
16-18
34
28-30
42-44
resistant0
48
26-28
resistant0
20
20
42

Only first 15 entries are displayed. Click here to see all.

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.995

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2223]	Sample type/isolated from	drinking fountain
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	-
#Environmental	#Aquatic	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Chryseobacterium gleum strain 3012STDY6944375	250.34	complete	PATRIC	250 tax ID	*
[Ref.: #66792]	Chryseobacterium sp. FDAARGOS 1104 strain FDAARGOS_1104	2778077.3	complete	PATRIC	2778077 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Chryseobacterium sp. FDAARGOS 1104 strain FDAARGOS_1104 strain Not applicable PATRIC: 2778077.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Chryseobacterium gleum strain 3012STDY6944375 PATRIC: 250.34
[Ref.: #69480]	motile	no	91.823	no
[Ref.: #69480]	gram-positive	no	98.593	no
[Ref.: #69480]	anaerobic	no	99.204	no
[Ref.: #69480]	aerobic	yes	86.744	no
[Ref.: #69480]	halophile	no	93.003	no
[Ref.: #69480]	spore-forming	no	95.278	no
[Ref.: #69480]	glucose-util	yes	83.902	no
[Ref.: #69480]	thermophile	no	98.763	yes
[Ref.: #69480]	flagellated	no	96.566	no
[Ref.: #69480]	glucose-ferment	no	93.367	no

Availability in culture collections External links

[Ref.: #2223]

Culture collection no.

DSM 5567, ATCC 29898, NCTC 10797

[Ref.: #75148]

SI-ID 7840

References

#2223

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5567

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#75148

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID7840.1 )

* These data were automatically processed and therefore are not curated

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Search for species Chryseobacterium sp. in external resources:
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Chryseobacterium sp. FDAARGOS 1104 strain FDAARGOS_1104 strain Not applicable

Chryseobacterium gleum strain 3012STDY6944375

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