Name: Chryseobacterium ginsengiterrae JCM 18517
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162260

Type strain:

Species: Chryseobacterium ginsengiterrae

Culture col. no.: JCM 18517, KCTC 32089

Strain history: D.-C. Yang and Y.-J. Kim DCY68.

NCBI tax ID(s): 1871047 (species)

Other strains from Chryseobacterium ginsengiterrae

C. ginsengiterrae JCM 19896, KCTC 32174 (type strain)

Section

Chryseobacterium ginsengiterrae JCM 18517 is a mesophilic bacterium that was isolated from Soil of a ginseng field in Gochang County.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Chryseobacterium*
	Species	"Chryseobacterium ginsengiterrae"
	Full Scientific Name (LPSN)	Chryseobacterium ginsengiterrae Noh et al. 2017

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-6, MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil of a ginseng field in Gochang County
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence JX141783 (>99% sequence identity) for Chryseobacterium from Microbeatlas

Aquatic Samples	232
Soil Samples	22
Animal Samples	259
Plant Samples	338
Total Samples	851

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Chryseobacterium ginsengiterrae strain DCY 78 16S ribosomal RNA gene, partial sequence	JX141783	1426	ENA	1245592 tax ID

[Ref.: #67770]

GC-content

42 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 18517, KCTC 32089

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Chryseobacterium ginsengiterrae sp. nov., with Beta-Glucosidase Activity Isolated from Soil of a Ginseng Field.	Noh JH, Hoang VA, Kim YJ, Kang JP, Yang DC	Curr Microbiol	10.1007/s00284-017-1335-6	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Chryseobacterium sp. in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF