Flavobacterium aquatile (DSM 1132, ATCC 11947, CIP 55.141)

Name: Flavobacterium aquatile (DSM 1132, ATCC 11947, CIP 55.141)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5517

Type strain

Strain Designation F 36, Taylor F36

Culture col. no. DSM 1132 ATCC 11947 CIP 55.141 DSM 30095 NCIB 8694 17 more

NCBI tax ID(s) 1453498 245

Special Collections DSMZ CCUG JCM CIP

History <- NCIB <- O.B. Weeks <- E.W. Taylor, F 36 IAM 12316 <-- ATCC 11947 <-- O. B. Weeks strain Taylor F36 <-- E. W. Taylor. CIP <- 1993, ATCC <- O.B. Weeks: strain Taylor F36 <- E. Taylor

Links

Flavobacterium aquatile F 36 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from deep well.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 10992

LMG 4427,ATCC 11947,DSM 1132,DSM 30095,IAM 12316,LMG 2952,LMG 4008,NCIB 8694,NCMB 644,NCTC 9758,CIP 103744,IFO 15052,CCUG 29304,NCIMB 8694,VKM B-1173,VKM B-1651,CIP 55.141,CECT 4312,NCIMB 644,KCTC 2908,NBRC 15052,NRRL B-14834,JCM 20475

@ref 20215

Last LPSN update 2026-02-09 11:18:59

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Flavobacterium

Species Flavobacterium aquatile

Full scientific name Flavobacterium aquatile corrig. (Frankland and Frankland 1889) Bergey et al. 1923 (Approved Lists 1980)

Synonyms (2)

Flavobacterium aquatilis
"Bacillus aquatilis"

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
116438	negative	rod-shaped
125438			93
125438	negative		98.227
125439	negative		99.9

Colony morphology

49578

Incubation period2-3 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
574	R2A MEDIUM (DSMZ Medium 830)	Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
574	CY-AGAR (DSMZ Medium 67)	Medium recipe at MediaDive	Name: CY-AGAR (DSMZ Medium 67) Composition: Agar 15.0 g/l Casitone 3.0 g/l CaCl2 x 2 H2O 1.36 g/l Yeast extract 1.0 g/l Distilled water
39763	MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati		Distilled water make up to (1000.000 ml);R2A agar (18.200 g)
116438	CIP Medium 566	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
574	positive	growth	30
39763	positive	growth	25
49578	positive	growth	20
67770	positive	growth	25
116438	positive	growth	22-25
116438	negative	growth	5
116438	negative	growth	37
116438	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
49578	aerobe
125439	obligate aerobe	98

Spore formation

@ref	Spore formation	Confidence
125438		93.309
125439		99.2

Halophily

@ref	Salt	Growth	Tested relation	Concentration
116438	NaCl	positive	growth	0 %
116438	NaCl		growth	2 %
116438	NaCl		growth	4 %
116438	NaCl		growth	6 %
116438	NaCl		growth	8 %
116438	NaCl		growth	10 %

Observation

67770

Observationquinones: MK-6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
116438	16947 ChEBI	citrate	-	carbon source
116438	4853 ChEBI	esculin	-	hydrolysis
116438	15792 ChEBI	malonate	-	assimilation
116438	17632 ChEBI	nitrate	-	reduction
116438	16301 ChEBI	nitrite	-	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
116438	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
116438	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116438	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116438	caseinase	-	3.4.21.50
116438	catalase	-	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116438	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
116438	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116438	ornithine decarboxylase	-	4.1.1.17
116438	oxidase	+
68382	trypsin	+	3.4.21.4	from API zym
116438	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	cellulose degradation	100	5 of 5
66794	biotin biosynthesis	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	vitamin K metabolism	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	sulfopterin metabolism	100	4 of 4
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	denitrification	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	threonine metabolism	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	gluconeogenesis	87.5	7 of 8
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	photosynthesis	85.71	12 of 14
66794	NAD metabolism	83.33	15 of 18
66794	methylglyoxal degradation	80	4 of 5
66794	glycine betaine biosynthesis	80	4 of 5
66794	starch degradation	80	8 of 10
66794	3-chlorocatechol degradation	80	4 of 5
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	acetate fermentation	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	lipid metabolism	74.19	23 of 31
66794	citric acid cycle	71.43	10 of 14
66794	propanol degradation	71.43	5 of 7
66794	pyrimidine metabolism	71.11	32 of 45
66794	purine metabolism	70.21	66 of 94
66794	propionate fermentation	70	7 of 10
66794	d-mannose degradation	66.67	6 of 9
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	enterobactin biosynthesis	66.67	2 of 3
66794	serine metabolism	66.67	6 of 9
66794	flavin biosynthesis	66.67	10 of 15
66794	acetoin degradation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	tryptophan metabolism	65.79	25 of 38
66794	histidine metabolism	65.52	19 of 29
66794	glycolysis	64.71	11 of 17
66794	glutamate and glutamine metabolism	64.29	18 of 28
66794	heme metabolism	64.29	9 of 14
66794	tyrosine metabolism	64.29	9 of 14
66794	pentose phosphate pathway	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	leucine metabolism	61.54	8 of 13
66794	arachidonate biosynthesis	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	glutathione metabolism	57.14	8 of 14
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	cysteine metabolism	55.56	10 of 18
66794	non-pathway related	55.26	21 of 38
66794	alanine metabolism	55.17	16 of 29
66794	lysine metabolism	54.76	23 of 42
66794	phenylalanine metabolism	53.85	7 of 13
66794	methionine metabolism	53.85	14 of 26
66794	isoleucine metabolism	50	4 of 8
66794	isoprenoid biosynthesis	50	13 of 26
66794	ketogluconate metabolism	50	4 of 8
66794	kanosamine biosynthesis II	50	1 of 2
66794	selenocysteine biosynthesis	50	3 of 6
66794	Entner Doudoroff pathway	50	5 of 10
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	butanoate fermentation	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	proline metabolism	45.45	5 of 11
66794	vitamin B6 metabolism	45.45	5 of 11
66794	oxidative phosphorylation	43.96	40 of 91
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	mevalonate metabolism	42.86	3 of 7
66794	carotenoid biosynthesis	40.91	9 of 22
66794	gallate degradation	40	2 of 5
66794	myo-inositol biosynthesis	40	4 of 10
66794	lipoate biosynthesis	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	polyamine pathway	39.13	9 of 23
66794	vitamin B1 metabolism	38.46	5 of 13
66794	metabolism of disaccharids	36.36	4 of 11
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	molybdenum cofactor biosynthesis	33.33	3 of 9
66794	3-phenylpropionate degradation	33.33	5 of 15
66794	cyanate degradation	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	formaldehyde oxidation	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	IAA biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	phosphatidylethanolamine bioynthesis	30.77	4 of 13
66794	glycine metabolism	30	3 of 10
66794	phenol degradation	30	6 of 20
66794	arginine metabolism	29.17	7 of 24
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	d-xylose degradation	27.27	3 of 11
66794	ascorbate metabolism	27.27	6 of 22
66794	toluene degradation	25	1 of 4
66794	carnitine metabolism	25	2 of 8
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	catecholamine biosynthesis	25	1 of 4
66794	degradation of sugar acids	24	6 of 25
66794	nitrate assimilation	22.22	2 of 9
66794	valine metabolism	22.22	2 of 9
66794	arachidonic acid metabolism	22.22	4 of 18
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	degradation of pentoses	21.43	6 of 28

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116438	-	+	+	+	-	+	+	+	+	-	+	+	-	-	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116438	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Environmental	#Aquatic

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
574	deep well	Kent	United Kingdom	GBR	Europe
49578	Deep well in the chalk region of Kent	Kent	United Kingdom	GBR	Europe
67770	Deep well	Kent	United Kingdom	GBR	Europe
116438	Environment, Deep well	Kent	United Kingdom	GBR	Europe

Taxonmaps

69479

Global distribution of 16S sequence AM230485 (>99% sequence identity) for Flavobacterium aquatile subclade from Microbeatlas

Aquatic Samples	634
Soil Samples	85
Animal Samples	143
Plant Samples	38
Total Samples	900

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
574	1	Risk group (German classification) According to TRBA 466
116438	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM75738v1 assembly for Flavobacterium aquatile LMG 4008 = ATCC 11947	contig	GCA_000757385	1453498.8	2617271337	1453498	77.83
67770	ASM221723v1 assembly for Flavobacterium aquatile LMG 4008 = ATCC 11947	scaffold	GCA_002217235	245.10	8116537070	1453498	75.22
67770	ASM653978v1 assembly for Flavobacterium aquatile NBRC 15052	contig	GCA_006539785	245.13		245	60.24

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	F.aquatile 16S ribosomal RNA	M62797	1518	245
574	Flavobacterium aquatile partial 16S rRNA gene, type strain DSM 1132	AM230485	1488	245
67770	Flavobacterium aquatile gene for 16S ribosomal RNA, partial sequence, strain: NBRC 15052	AB517711	1439	245

GC content

@ref	GC-content (mol%)	Method
574	31.9
574	32.2	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Flavobacterium aquatile LMG 4008 = ATCC 11947
NCBI: GCA_002217235

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.20	no
125439	motility	BacteriaNetⓘ	no	67.10	no
125439	gram_stain	BacteriaNetⓘ	negative	99.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Flavobacterium aquatile LMG 4008
PATRIC: 1453498.8

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.23	no
125438	anaerobic	anaerobicⓘ	no	95.23	no
125438	spore-forming	spore-formingⓘ	no	93.31	no
125438	aerobic	aerobicⓘ	yes	86.59	yes
125438	thermophilic	thermophileⓘ	no	97.37	no
125438	flagellated	motile2+ⓘ	no	93.00	no

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Phylogeny	Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis.	Nakagawa Y, Yamasato K.	J Gen Microbiol	10.1099/00221287-139-6-1155	1993
	Comparative (computational) analysis of the DNA methylation status of trinucleotide repeat expansion diseases.	Ghorbani M, Taylor SJ, Pook MA, Payne A.	J Nucleic Acids	10.1155/2013/689798	2013
	NprR-NprX Quorum-Sensing System Regulates the Algicidal Activity of Bacillus sp. Strain S51107 against Bloom-Forming Cyanobacterium Microcystis aeruginosa.	Wu L, Guo X, Liu X, Yang H.	Front Microbiol	10.3389/fmicb.2017.01968	2017
Enzymology	Survey, purification, and properties of sugar phosphate phosphohydrolase among microorganisms.	Choy FY, Lee YP.	Can J Biochem Cell Biol	10.1139/o83-166	1983
	Antimicrobial substances from aspen tissue grown in vitro.	MATHES MC.	Science	10.1126/science.140.3571.1101	1963
	Analyzing the Interaction between Tetrahymena pyriformis and Bacteria under Different Physicochemical Conditions When Infecting Guppy Using the eDNA Method.	Wang J, Wang X, Liu L, Wang X, Wang J, Zheng Y, Wang L, Pan X.	Animals (Basel)	10.3390/ani14152194	2024
	Three marine species of the genus Fulvivirga, rich sources of carbohydrate-active enzymes degrading alginate, chitin, laminarin, starch, and xylan.	Nguyen TTH, Vuong TQ, Han HL, Li Z, Lee YJ, Ko J, Nedashkovskaya OI, Kim SG.	Sci Rep	10.1038/s41598-023-33408-4	2023
Genetics	Mobilome and Resistome Reconstruction from Genomes Belonging to Members of the Bifidobacterium Genus.	Mancino W, Lugli GA, Sinderen DV, Ventura M, Turroni F.	Microorganisms	10.3390/microorganisms7120638	2019
Phylogeny	A Genus Definition for Bacteria and Archaea Based on a Standard Genome Relatedness Index.	Barco RA, Garrity GM, Scott JJ, Amend JP, Nealson KH, Emerson D.	mBio	10.1128/mbio.02475-19	2020
Metabolism	Changes in the size and composition of intracellular pools of nonesterified coenzyme A and coenzyme A thioesters in aerobic and facultatively anaerobic bacteria.	Chohnan S, Furukawa H, Fujio T, Nishihara H, Takamura Y.	Appl Environ Microbiol	10.1128/aem.63.2.553-560.1997	1997
Genetics	Flavobacterium aerium sp. nov., a bacterium isolated from the air of the Icelandic volcanic island Surtsey.	Daussin A, Vannier P, Menager M, Mater E, Marteinsson VTh.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006647	2025
Phylogeny	Flavobacterium squillarum sp. nov., isolated from a freshwater shrimp culture pond, and emended descriptions of Flavobacterium haoranii, Flavobacterium cauense, Flavobacterium terrae and Flavobacterium aquatile.	Sheu SY, Lin YS, Chen WM.	Int J Syst Evol Microbiol	10.1099/ijs.0.046425-0	2013
Phylogeny	Flavobacterium indicum sp. nov., isolated from warm spring water in Assam, India.	Saha P, Chakrabarti T.	Int J Syst Evol Microbiol	10.1099/ijs.0.64309-0	2006
Metabolism	A novel protein-deamidating enzyme from Chryseobacterium proteolyticum sp. nov., a newly isolated bacterium from soil.	Yamaguchi S, Yokoe M.	Appl Environ Microbiol	10.1128/aem.66.8.3337-3343.2000	2000
Phylogeny	Flavobacterium capsici sp. nov., isolated from the rhizospheric soils of bell pepper (Capsicum annuum L.).	Cho DH, Peng Y, Humaira Z, Park YL, Kim HJ, Jeong RD, Kim CY, Lee J.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006554	2024
Phylogeny	Characterization of the phylogenetic diversity of five novel species belonging to the genus Bifidobacterium: Bifidobacterium castoris sp. nov., Bifidobacterium callimiconis sp. nov., Bifidobacterium goeldii sp. nov., Bifidobacterium samirii sp. nov. and Bifidobacterium dolichotidis sp. nov.	Duranti S, Lugli GA, Napoli S, Anzalone R, Milani C, Mancabelli L, Alessandri G, Turroni F, Ossiprandi MC, van Sinderen D, Ventura M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.003306	2019
Phylogeny	Comamonas jiangduensis sp. nov., a biosurfactant-producing bacterium isolated from agricultural soil.	Sun LN, Zhang J, Chen Q, He J, Li QF, Li SP.	Int J Syst Evol Microbiol	10.1099/ijs.0.045716-0	2013
Phylogeny	Halomonas smyrnensis sp. nov., a moderately halophilic, exopolysaccharide-producing bacterium.	Poli A, Nicolaus B, Denizci AA, Yavuzturk B, Kazan D.	Int J Syst Evol Microbiol	10.1099/ijs.0.037036-0	2013
Phylogeny	Comamonas zonglianii sp. nov., isolated from phenol-contaminated soil.	Yu XY, Li YF, Zheng JW, Li Y, Li L, He J, Li SP.	Int J Syst Evol Microbiol	10.1099/ijs.0.019612-0	2011
Phylogeny	Flavobacterium humi sp. nov., a flexirubin-type pigment producing bacterium, isolated from soil.	Kim I, Kim J, Chhetri G, Seo T	J Microbiol	10.1007/s12275-019-9350-x	2019
Phylogeny	Flavobacterium cerinum sp. nov., isolated from Arctic tundra soil.	Zhang R, Zhang XY, Sun XK, Mu DS, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.003648	2019
Phylogeny	Flavobacterium kingsejongi sp. nov., a carotenoid-producing species isolated from Antarctic penguin faeces.	Choi JY, Kim JH, Lee PC	Int J Syst Evol Microbiol	10.1099/ijsem.0.002610	2018
Phylogeny	Flavobacterium dankookense sp. nov., isolated from a freshwater reservoir, and emended descriptions of Flavobacterium cheonanense, F. chungnamense, F. koreense and F. aquatile.	Lee S, Weon HY, Han K, Ahn TY	Int J Syst Evol Microbiol	10.1099/ijs.0.032698-0	2011
Phylogeny	Flavobacterium terrae sp. nov. and Flavobacterium cucumis sp. nov., isolated from greenhouse soil.	Weon HY, Song MH, Son JA, Kim BY, Kwon SW, Go SJ, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.64935-0	2007

References

#574	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1132
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39763	; Curators of the CIP;
#49578	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 29304
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116438	Collection of Institut Pasteur ; Curators of the CIP; CIP 103744
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Flavobacterium aquatile (DSM 1132, ATCC 11947, CIP 55.141)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Pathway annotation

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

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Sequence information

Genome sequences

Genome browser: GCA_000757385

16S sequences

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