Klebsiella oxytoca (CCUG 29298, DSM 6673, ATCC 43863)

Name: Klebsiella oxytoca (CCUG 29298, DSM 6673, ATCC 43863)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4942

Type strain

Strain Designation LRA 006 01 73

Culture col. no. CCUG 29298 DSM 6673 ATCC 43863 CIP 103546 LRA 006 01 73

NCBI tax ID(s) 571

Special Collections DSMZ CCUG CIP

History DSMZ <- ATCC <- V. Heinrich, LRA CIP <- 1992, R. Mercier, bioMérieux, France: strain LRA 006 01 73 <- Centre Recherche Service Santé Armées, Lyon, France

Links

Klebsiella oxytoca LRA 006 01 73 is a facultative anaerobe, Gram-negative, rod-shaped human pathogen of the family Enterobacteriaceae.

Gram-negative rod-shaped facultative anaerobe human pathogen 16S sequence Bacteria

Name and taxonomic classification

SI-ID 8999

LMG 17295,ATCC 43863,DSM 6673,CCUG 29298,CIP 103546

@ref 20215

Last LPSN update 2026-05-29 08:26:03

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Klebsiella

Species Klebsiella oxytoca

Full scientific name Klebsiella oxytoca (Flügge 1886) Lautrop 1956 (Approved Lists 1980)

Synonyms (1)

"Bacillus oxytocus"

BacDive ID	Other strains from **Klebsiella oxytoca** (44)	Type strain
4941	K. oxytoca 479-2, DSM 5175, ATCC 13182, IAM 14201, JCM ... (type strain)
130956	K. oxytoca 1028, DSM 24121
4943	K. oxytoca M5a1, DSM 7342, DSM 3539, NCIB 12204
4944	K. oxytoca TauN1, DSM 16963
4945	K. oxytoca Colworth2703, DSM 25736, CIP 110043, NCIMB ...
130303	K. oxytoca BAS-10, DSM 29614
134506	K. oxytoca KER, CIP 105873
134796	K. oxytoca Sobeaut, CIP 66.6
134797	K. oxytoca Belloni, CIP 66.7
134983	K. oxytoca U.910.295092, CIP 107218
135290	K. oxytoca AmMS 101, CIP 103569, ATCC 49131
135330	K. oxytoca AmMS 247, CIP 103663, ATCC 49473
136480	K. oxytoca SL911, CIP 106098
136481	K. oxytoca SL9111, CIP 106099
137289	K. oxytoca SL 7811, CIP 105096
137590	K. oxytoca CIP 79.32
139515	K. oxytoca SL 781, CIP 104963
141247	K. oxytoca CCUG 383
142930	K. oxytoca CCUG 15788
143417	K. oxytoca CCUG 19048
143547	K. oxytoca CCUG 20014
143868	K. oxytoca CCUG 21666
144225	K. oxytoca CCUG 23732
144234	K. oxytoca CCUG 23880
144772	K. oxytoca CCUG 26509
144859	K. oxytoca CCUG 26858
145816	K. oxytoca CCUG 29683 A
146943	K. oxytoca CCUG 32516
147262	K. oxytoca CCUG 33222
150581	K. oxytoca CCUG 41654
150684	K. oxytoca CCUG 41957
150983	K. oxytoca CCUG 42935
151279	K. oxytoca CCUG 43602
153718	K. oxytoca CCUG 50735
153933	K. oxytoca CCUG 51683
155829	K. oxytoca CCUG 59412
155992	K. oxytoca CCUG 59935
156818	K. oxytoca CCUG 65544
173354	K. oxytoca U12, CRBIP19.318
173355	K. oxytoca U10, CRBIP19.319
173356	K. oxytoca CIP 111713
178762	K. oxytoca Hoechst 1522E, ST033702
178763	K. oxytoca Wiedemann IV3-23, ST033703
178764	K. oxytoca Hoechst 1082E, ST033704

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
121490	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2763	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
2763	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
41130	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
121490	CIP Medium 72	Medium recipe at CIP
121490	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
2763	positive	growth	37
41130	positive	growth	30
49576	positive	growth	30-37
121490	positive	growth	10-41
121490	negative	growth	5

Physiology and metabolism

Oxygen tolerance

121490

Oxygen tolerancefacultative anaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68368	27613 ChEBI	amygdalin	+	fermentation	from API 20E
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68374	29016 ChEBI	arginine	-	hydrolysis	from API ID32E
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68374	17057 ChEBI	cellobiose	+	builds acid from	from API ID32E
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
121490	16947 ChEBI	citrate	+	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68371	17108 ChEBI	D-arabinose	+	builds acid from	from API 50CH acid
68374	18333 ChEBI	D-arabitol	+	builds acid from	from API ID32E
68371	18333 ChEBI	D-arabitol	+	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68374	18024 ChEBI	D-galacturonic acid	+	builds acid from	from API ID32E
68374	17634 ChEBI	D-glucose	+	builds acid from	from API ID32E
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68374	16899 ChEBI	D-mannitol	+	builds acid from	from API ID32E
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68368	16899 ChEBI	D-mannitol	+	fermentation	from API 20E
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	+	builds acid from	from API 50CH acid
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
121490	17234 ChEBI	glucose	+	fermentation
121490	17234 ChEBI	glucose	+	degradation
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68374	30849 ChEBI	L-arabinose	+	builds acid from	from API ID32E
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68368	30849 ChEBI	L-arabinose	+	fermentation	from API 20E
68374	18403 ChEBI	L-arabitol	+	builds acid from	from API ID32E
68371	18403 ChEBI	L-arabitol	+	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68374	62345 ChEBI	L-rhamnose	+	builds acid from	from API ID32E
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68368	62345 ChEBI	L-rhamnose	+	fermentation	from API 20E
68371	17266 ChEBI	L-sorbose	+	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
121490	17716 ChEBI	lactose	+	fermentation
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68374	25094 ChEBI	lysine	+	degradation	from API ID32E
121490	15792 ChEBI	malonate	+	assimilation
68374	15792 ChEBI	malonate	+	assimilation	from API ID32E
68374	17306 ChEBI	maltose	+	builds acid from	from API ID32E
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	+	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68368	28053 ChEBI	melibiose	+	fermentation	from API 20E
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68374	17268 ChEBI	myo-inositol	+	builds acid from	from API ID32E
68371	17268 ChEBI	myo-inositol	+	builds acid from	from API 50CH acid
68368	17268 ChEBI	myo-inositol	+	fermentation	from API 20E
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
121490	17632 ChEBI	nitrate	+	reduction
121490	16301 ChEBI	nitrite	+	reduction
68374	18257 ChEBI	ornithine	-	degradation	from API ID32E
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68374	18394 ChEBI	palatinose	+	builds acid from	from API ID32E
68371	0 ChEBI	Potassium 2-ketogluconate	+	builds acid from	from API 50CH acid
68374	0 ChEBI	Potassium 5-ketogluconate	+	builds acid from	from API ID32E
68371	0 ChEBI	Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68374	15963 ChEBI	ribitol	+	builds acid from	from API ID32E
68371	15963 ChEBI	ribitol	+	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
121490	132112 ChEBI	sodium thiosulfate	-	builds gas from
68374	30911 ChEBI	sorbitol	+	builds acid from	from API ID32E
68368	30911 ChEBI	sorbitol	+	fermentation	from API 20E
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68374	17992 ChEBI	sucrose	+	builds acid from	from API ID32E
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68368	17992 ChEBI	sucrose	+	fermentation	from API 20E
68374	27082 ChEBI	trehalose	+	builds acid from	from API ID32E
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68374	27897 ChEBI	tryptophan	+	energy source	from API ID32E
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68374	16199 ChEBI	urea	+	hydrolysis	from API ID32E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121490	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68374	35581 ChEBI	indole	from API ID32E
121490	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
121490	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	+			from API 20E
121490	17234 ChEBI	glucose		-
68374	35581 ChEBI	indole			+	from API ID32E
68368	35581 ChEBI	indole			+	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121490	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68374	alpha-galactosidase	+	3.2.1.22	from API ID32E
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68374	alpha-glucosidase	+	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68374	arginine dihydrolase	-	3.5.3.6	from API ID32E
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
121490	beta-galactosidase	+	3.2.1.23
68374	beta-galactosidase	+	3.2.1.23	from API ID32E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68374	beta-glucosidase	+	3.2.1.21	from API ID32E
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
121490	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
121490	gelatinase	-
68368	gelatinase	-		from API 20E
68374	L-aspartate arylamidase	+	3.4.11.21	from API ID32E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68374	lipase	-		from API ID32E
68382	lipase (C 14)	-		from API zym
121490	lysine decarboxylase	+	4.1.1.18
68374	lysine decarboxylase	+	4.1.1.18	from API ID32E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121490	ornithine decarboxylase	-	4.1.1.17
68374	ornithine decarboxylase	-	4.1.1.17	from API ID32E
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
121490	oxidase	-
121490	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	+	3.4.21.4	from API zym
121490	tryptophan deaminase	-
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
121490	urease	+	3.5.1.5
68374	urease	+	3.5.1.5	from API ID32E
68382	valine arylamidase	+		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
2763	+/-	-	+	-	+	-	+	-	+	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
49576	+	-	-	-	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121490	-	+	+	-	-	+	+	+	+	-	+	+	+	+	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
121490	not determinedn.d.	+	-	+	+	+	+	-	+	-	+	+	+	+	+	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	+/-	+	+	+	-	-	+	+	-	+	-	+	+	+	+	+	+

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
49576	-	-	+	+	+	+	+	-	+	+	+	+	+	+	-	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121490	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	+	+	+	+	-	+	-	-	-	+	-	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	-	-	+	-	-	+	-	-	+	-	-	+	+	+	-	-	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
41130	Lyon	France	FRA	Europe
121490	Lyon	France	FRA	Europe	1976

Taxonmaps

69479

Global distribution of 16S sequence KC155255 (>99% sequence identity) for Enterobacteriaceae from Microbeatlas

Aquatic Samples	233
Soil Samples	121
Animal Samples	3440
Plant Samples	216
Total Samples	4010

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
2763			2	Risk group (German classification) According to TRBA 466
121490			2	Risk group (French classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Klebsiella oxytoca ATCC:43863 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	FJ410391	3269		571
20218	Klebsiella oxytoca strain ATCC 43863 16S ribosomal RNA gene, partial sequence	KC155255	1407		571

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Fermentability of a Novel Galacto-Oligosaccharide Mixture by Lactobacillus spp. and Bifidobacterium spp.	Kittibunchakul S, Maischberger T, Domig KJ, Kneifel W, Nguyen HM, Haltrich D, Nguyen TH.	Molecules	10.3390/molecules23123352	2018
Metabolism	Fermentation and evaluation of Klebsiella pneumoniae and K. oxytoca on the production of 2,3-butanediol.	Cho JH, Rathnasingh C, Song H, Chung BW, Lee HJ, Seung D.	Bioprocess Biosyst Eng	10.1007/s00449-012-0691-7	2012
	Development of a novel polymerase spiral reaction (PSR) assay for rapid and visual detection of Clostridium perfringens in meat.	Milton AAP, Momin KM, Ghatak S, Priya GB, Angappan M, Das S, Puro K, Sanjukta RK, Shakuntala I, Sen A, Kandpal BK.	Heliyon	10.1016/j.heliyon.2021.e05941	2021
Enzymology	A Novel Bacteriophage Targeting Cronobacter sakazakii Is a Potential Biocontrol Agent in Foods.	Lee JH, Bai J, Shin H, Kim Y, Park B, Heu S, Ryu S.	Appl Environ Microbiol	10.1128/aem.01827-15	2016
Enzymology	Evaluation of the VITEK 2 system for rapid identification of medically relevant gram-negative rods.	Funke G, Monnet D, deBernardis C, von Graevenitz A, Freney J.	J Clin Microbiol	10.1128/jcm.36.7.1948-1952.1998	1998
Enzymology	Quantitative real-time Legionella PCR for environmental water samples: data interpretation.	Joly P, Falconnet PA, Andre J, Weill N, Reyrolle M, Vandenesch F, Maurin M, Etienne J, Jarraud S.	Appl Environ Microbiol	10.1128/aem.72.4.2801-2808.2006	2006
Enzymology	Detection of Campylobacter species and Arcobacter butzleri in stool samples by use of real-time multiplex PCR.	de Boer RF, Ott A, Guren P, van Zanten E, van Belkum A, Kooistra-Smid AM.	J Clin Microbiol	10.1128/jcm.01716-12	2013
Enzymology	Detection of legionellae in hospital water samples by quantitative real-time LightCycler PCR.	Wellinghausen N, Frost C, Marre R.	Appl Environ Microbiol	10.1128/aem.67.9.3985-3993.2001	2001
Phylogeny	Evaluation of the Biolog automated microbial identification system.	Klingler JM, Stowe RP, Obenhuber DC, Groves TO, Mishra SK, Pierson DL.	Appl Environ Microbiol	10.1128/aem.58.6.2089-2092.1992	1992
Metabolism	Production of 2,3-butanediol by a low-acid producing Klebsiella oxytoca NBRF4.	Han SH, Lee JE, Park K, Park YC	N Biotechnol	10.1016/j.nbt.2012.09.004	2012
Metabolism	Removal of pathogenic factors from 2,3-butanediol-producing Klebsiella species by inactivating virulence-related wabG gene.	Jung SG, Jang JH, Kim AY, Lim MC, Kim B, Lee J, Kim YR	Appl Microbiol Biotechnol	10.1007/s00253-012-4284-9	2012

References

#2763	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6673
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#41130	; Curators of the CIP;
#49576	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 29298
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68374	Automatically annotated from API ID32E .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121490	Collection of Institut Pasteur ; Curators of the CIP; CIP 103546
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Klebsiella oxytoca (CCUG 29298, DSM 6673, ATCC 43863)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API 20E

API zym

API 50CHac

API ID32E

API biotype100

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media