Klebsiella oxytoca (DSM 5175, ATCC 13182, IAM 14201)

Name: Klebsiella oxytoca (DSM 5175, ATCC 13182, IAM 14201)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4941

Type strain

Strain Designation 479-2

Culture col. no. DSM 5175 ATCC 13182 IAM 14201 JCM 1665 CCUG 15717 10 more

NCBI tax ID(s) 1218097 571

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- ATCC <- R. Hugh, 479-2 JCM <-- Y. Kosako 82060 <-- R. Sakazaki 181 <-- ATCC 13182 <-- R. Hugh 479-2. CIP <- 1990, ATCC <- R. Hugh: strain 479-2, Klebsiella pneumoniae

Links

Klebsiella oxytoca 479-2 is an aerobe, Gram-negative, rod-shaped human pathogen that was isolated from pharyngeal tonsil.

Gram-negative rod-shaped aerobe human pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 3038

LMG 3055,ATCC 13182,CCUG 15717,JCM 1665,CECT 860,CIP 103434,DSM 5175,NCIB 12259,IAM 14201,NCIMB 12259,CCUG20633,CCRC 13985,BCRC 13985,HAMBI 1301,CDBB 968,NBRC 102593,CNCTC 6110,VTT E-97766

@ref 20215

Last LPSN update 2026-05-29 08:26:03

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Klebsiella

Species Klebsiella oxytoca

Full scientific name Klebsiella oxytoca (Flügge 1886) Lautrop 1956 (Approved Lists 1980)

Synonyms (1)

"Bacillus oxytocus"

BacDive ID	Other strains from **Klebsiella oxytoca** (44)	Type strain
130956	K. oxytoca 1028, DSM 24121
4942	K. oxytoca LRA 006 01 73, CCUG 29298, DSM 6673, ATCC ...
4943	K. oxytoca M5a1, DSM 7342, DSM 3539, NCIB 12204
4944	K. oxytoca TauN1, DSM 16963
4945	K. oxytoca Colworth2703, DSM 25736, CIP 110043, NCIMB ...
130303	K. oxytoca BAS-10, DSM 29614
134506	K. oxytoca KER, CIP 105873
134796	K. oxytoca Sobeaut, CIP 66.6
134797	K. oxytoca Belloni, CIP 66.7
134983	K. oxytoca U.910.295092, CIP 107218
135290	K. oxytoca AmMS 101, CIP 103569, ATCC 49131
135330	K. oxytoca AmMS 247, CIP 103663, ATCC 49473
136480	K. oxytoca SL911, CIP 106098
136481	K. oxytoca SL9111, CIP 106099
137289	K. oxytoca SL 7811, CIP 105096
137590	K. oxytoca CIP 79.32
139515	K. oxytoca SL 781, CIP 104963
141247	K. oxytoca CCUG 383
142930	K. oxytoca CCUG 15788
143417	K. oxytoca CCUG 19048
143547	K. oxytoca CCUG 20014
143868	K. oxytoca CCUG 21666
144225	K. oxytoca CCUG 23732
144234	K. oxytoca CCUG 23880
144772	K. oxytoca CCUG 26509
144859	K. oxytoca CCUG 26858
145816	K. oxytoca CCUG 29683 A
146943	K. oxytoca CCUG 32516
147262	K. oxytoca CCUG 33222
150581	K. oxytoca CCUG 41654
150684	K. oxytoca CCUG 41957
150983	K. oxytoca CCUG 42935
151279	K. oxytoca CCUG 43602
153718	K. oxytoca CCUG 50735
153933	K. oxytoca CCUG 51683
155829	K. oxytoca CCUG 59412
155992	K. oxytoca CCUG 59935
156818	K. oxytoca CCUG 65544
173354	K. oxytoca U12, CRBIP19.318
173355	K. oxytoca U10, CRBIP19.319
173356	K. oxytoca CIP 111713
178762	K. oxytoca Hoechst 1522E, ST033702
178763	K. oxytoca Wiedemann IV3-23, ST033703
178764	K. oxytoca Hoechst 1082E, ST033704

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
121493	negative	rod-shaped
125439	negative		96.189
125438	negative		100

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1950	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
1950	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
34208	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121493	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
1950	positive	growth	37
34208	positive	growth	30
46330	positive	growth	37
67770	positive	growth	37
121493	positive	growth	5-41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
46330	aerobe
121493	facultative anaerobe
125439	aerobe	93.512

Spore formation

@ref	Spore formation	Confidence
125439		99.25

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68368	27613 ChEBI	amygdalin	+	fermentation	from API 20E
121493	16947 ChEBI	citrate	+	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68368	17634 ChEBI	D-glucose	+	fermentation	from API 20E
68368	16899 ChEBI	D-mannitol	+	fermentation	from API 20E
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
121493	17234 ChEBI	glucose	+	fermentation
121493	17234 ChEBI	glucose	+	degradation
68368	30849 ChEBI	L-arabinose	+	fermentation	from API 20E
68368	62345 ChEBI	L-rhamnose	+	fermentation	from API 20E
121493	17716 ChEBI	lactose	-	fermentation
121493	15792 ChEBI	malonate	+	assimilation
121493	29864 ChEBI	mannitol	+	fermentation
68368	28053 ChEBI	melibiose	+	fermentation	from API 20E
68368	17268 ChEBI	myo-inositol	+	fermentation	from API 20E
121493	17632 ChEBI	nitrate	+	reduction
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
121493	132112 ChEBI	sodium thiosulfate	-	builds gas from
68368	30911 ChEBI	sorbitol	+	fermentation	from API 20E
68368	17992 ChEBI	sucrose	+	fermentation	from API 20E
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121493	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68368	16136 ChEBI	hydrogen sulfide	from API 20E
121493	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Voges-proskauer-test	Methylred-test
121493	15688 ChEBI	acetoin		+
121493	17234 ChEBI	glucose			-
68368	35581 ChEBI	indole	+			from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121493	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	+	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
121493	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
121493	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68368	cytochrome oxidase	-	1.9.3.1	from API 20E
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
121493	gelatinase	-
68368	gelatinase	-		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
121493	lysine decarboxylase	+	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121493	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
121493	oxidase	-
121493	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	+	3.4.21.4	from API zym
121493	tryptophan deaminase	-
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
121493	urease	+	3.5.1.5
68382	valine arylamidase	+		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
1950	+	-	-	-	+	-	+	-	+	-	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
1950	+	-	+	-	+	-	+	-	+	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
1950	-	+	+	-	+	-	+	-	+	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
1950	+	-	+	-	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121493	-	+	+	+	-	+	+	-	+	-	+	+	+	+	-	+	+	-	+	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121493	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-	-	+	+	+	+	+	+	+	+	+	+	-	+	+	+	+	+	+	-	+	+	-	-	-	+	-	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+	-	+	-	-	+	+	-	+	-	-	+	+	+	-	-	-	+	-	+	-	-	+	+	+	+	+	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host Body-Site	#Oral cavity and airways

Isolation

@ref	Sample type	Host species
1950	pharyngeal tonsil
46330	Human pharyngeal tonsil	Homo sapiens
67770	Pharyngeal tonsil
121493	Human, Pharynx	Homo sapiens

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
1950			2	Risk group (German classification) According to TRBA 466
121493			2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM159869v1 assembly for Klebsiella oxytoca NBRC 105695	contig	GCA_001598695	1218097.3	2731957710	1218097	70.74
66792	ASM2011553v1 assembly for Klebsiella oxytoca DSM 5175	contig	GCA_020115535	571.1124	8118326472	571	64.54

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Klebsiella oxytoca partial 16S rRNA gene, type strain SB175T	AJ871858	1454	571
20218	Klebsiella oxytoca strain ATCC 13182 16S ribosomal RNA gene, partial sequence	FJ971867	795	571
20218	Klebsiella oxytoca 16S ribosomal RNA gene, partial sequence	U78183	1502	571
20218	Klebsiella oxytoca 16S rRNA gene, strain ATCC13182T, partial	Y17655	1452	571
20218	Klebsiella oxytoca gene for 16S ribosomal RNA, partial sequence	AB004754	1441	571
20218	Klebsiella oxytoca gene for 16S rRNA, partial sequence, strain: JCM 1665	AB626120	1462	571
20218	Klebsiella oxytoca gene for 16S rRNA, partial sequence, strain: NBRC 102593	AB681870	1465	571
1950	Klebsiella oxytoca 16S ribosomal RNA gene, partial sequence	AF129440	1436	571
124043	Klebsiella oxytoca gene for 16S rRNA, partial sequence, strain: NBRC 105695.	AB682268	1465	571
124043	Klebsiella oxytoca gene for 16S ribosomal RNA, partial sequence, strain: JCM 1665.	LC133345	1462	571
124043	Klebsiella oxytoca strain ATCC 13182 16S ribosomal RNA gene, partial sequence.	PV295258	1455	571
124043	Klebsiella oxytoca strain ATCC 13182 16S ribosomal RNA gene, partial sequence.	OP164745	1432	571
124043	Klebsiella oxytoca strain ATCC 13182 16S ribosomal RNA gene, partial sequence.	PP859015	726	571
124043	Klebsiella oxytoca strain ATCC 13182 16S ribosomal RNA gene, partial sequence.	PP859298	727	571
124043	Klebsiella oxytoca strain JCM 1665 16S ribosomal RNA gene, partial sequence.	MN590525	1441	571
124043	Klebsiella oxytoca strain NBRC 102593 16S ribosomal RNA gene, partial sequence.	MG015929	370	571
124043	Klebsiella oxytoca strain NBRC 102593 16S ribosomal RNA gene, partial sequence.	OP164739	1433	571

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM159869v1 assembly for Klebsiella oxytoca NBRC 105695
NCBI: GCA_001598695

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	93.51	no
125439	gram_stain	BacteriaNetⓘ	negative	96.19	no
125439	motility	BacteriaNetⓘ	yes	66.75	no
125439	spore_formation	BacteriaNetⓘ	no	99.25	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Klebsiella oxytoca NBRC 105695
PATRIC: 1218097.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	96.79	yes
125438	spore-forming	spore-formingⓘ	no	87.89	no
125438	aerobic	aerobicⓘ	no	50.34	no
125438	thermophilic	thermophileⓘ	no	99.75	yes
125438	flagellated	motile2+ⓘ	no	75.82	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Klebsiella pneumoniae Phage M198 and Its Therapeutic Potential.	Leshkasheli L, Kusradze I, Bolkvadze D, Askilashvili L, Chichashvili M, Tsertsvadze G, Zaldastanishvili E.	Viruses	10.3390/v17010115	2025
	KpSC-ID: a multiplex real-time PCR assay for the simultaneous detection of the Klebsiella pneumoniae species complex and specific identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae and Klebsiella variicola.	McAndrew G, Barbier E, Rodrigues C, Piveteau P, Brisse S, Reddington K.	Microbiology (Reading)	10.1099/mic.0.001587	2025
	Establishment of a Real-Time PCR Assay for the Detection of Devriesea agamarum in Lizards.	Brockmann M, Leineweber C, Hellebuyck T, Martel A, Pasmans F, Gentil M, Muller E, Marschang RE.	Animals (Basel)	10.3390/ani13050881	2023
	A multiplex Taqman PCR assay for MRSA detection from whole blood.	Duraiswamy S, Agarwalla S, Lok KS, Tse YY, Wu R, Wang Z.	PLoS One	10.1371/journal.pone.0294782	2023
	Genetic manipulations of nonmodel gut microbes.	Jin WB, Guo CJ.	Imeta	10.1002/imt2.216	2024
	Development of a Droplet Digital Polymerase Chain Reaction for Rapid and Simultaneous Identification of Common Foodborne Pathogens in Soft Cheese.	Cremonesi P, Cortimiglia C, Picozzi C, Minozzi G, Malvisi M, Luini M, Castiglioni B.	Front Microbiol	10.3389/fmicb.2016.01725	2016
	Cytotoxic effects of Klebsiella oxytoca strains isolated from patients with antibiotic-associated hemorrhagic colitis or other diseases caused by infections and from healthy subjects.	Joainig MM, Gorkiewicz G, Leitner E, Weberhofer P, Zollner-Schwetz I, Lippe I, Feierl G, Krause R, Hinterleitner T, Zechner EL, Hogenauer C.	J Clin Microbiol	10.1128/jcm.01741-09	2010
	Expanding the antibacterial selectivity of polyether ionophore antibiotics through diversity-focused semisynthesis.	Lin S, Liu H, Svenningsen EB, Wollesen M, Jacobsen KM, Andersen FD, Moyano-Villameriel J, Pedersen CN, Norby P, Torring T, Poulsen TB.	Nat Chem	10.1038/s41557-020-00601-1	2021
	Nanoantibiotics: Functions and Properties at the Nanoscale to Combat Antibiotic Resistance.	Mamun MM, Sorinolu AJ, Munir M, Vejerano EP.	Front Chem	10.3389/fchem.2021.687660	2021
Enzymology	Evaluation of a novel real-time PCR test based on the ssrA gene for the identification of group B streptococci in vaginal swabs.	Wernecke M, Mullen C, Sharma V, Morrison J, Barry T, Maher M, Smith T.	BMC Infect Dis	10.1186/1471-2334-9-148	2009
Phylogeny	Simultaneous detection and differentiation of Escherichia coli populations from environmental freshwaters by means of sequence variations in a fragment of the beta-D-glucuronidase gene.	Farnleitner AH, Kreuzinger N, Kavka GG, Grillenberger S, Rath J, Mach RL.	Appl Environ Microbiol	10.1128/aem.66.4.1340-1346.2000	2000
Phylogeny	Molecular Detection and Phylogenetic Analysis of the alkB Gene in Klebsiella oxytoca Strains Isolated from the Gut of Tenebrio molitor.	Mupamhadzi TL, Machona O, Chidzwondo F, Mangoyi R.	ScientificWorldJournal	10.1155/2024/3350591	2024
	Antibacterial and Antibiofilm Activities of Hydralazine, an Antihypertensive Drug: In Vitro and In Silico Approaches.	Pereira AMG, da Silva BF, Araujo IMF, Aguiar FKC, Coelho PAT, Costa RA, Marinho MM, Marinho ES, Nunes JVS, Carneiro VA, Santos HSD.	Antibiotics (Basel)	10.3390/antibiotics14030286	2025
Genetics	Whole Genome Sequencing and Comparative Genomics Analysis of Goat-Derived Klebsiella oxytoca.	Zhang Y, Zhang Z, Wang Z, Chen Y, Liao L, Du L, Gao H, Chen Q, Man C, Chen S, Wang F.	Genes (Basel)	10.3390/genes16010013	2024
	Zinc-Based Nanoparticles Reduce Bacterial Biofilm Formation.	Bianchini Fulindi R, Domingues Rodrigues J, Lemos Barbosa TW, Goncalves Garcia AD, de Almeida La Porta F, Pratavieira S, Chiavacci LA, Pessoa Araujo Junior J, da Costa PI, Martinez LR.	Microbiol Spectr	10.1128/spectrum.04831-22	2023
	Cefotaxime Mediated Synthesis of Gold Nanoparticles: Characterization and Antibacterial Activity.	Al Hagbani T, Rizvi SMD, Hussain T, Mehmood K, Rafi Z, Moin A, Abu Lila AS, Alshammari F, Khafagy ES, Rahamathulla M, Abdallah MH.	Polymers (Basel)	10.3390/polym14040771	2022
	Enhanced Antibiotic Tolerance of an In Vitro Multispecies Uropathogen Biofilm Model, Useful for Studies of Catheter-Associated Urinary Tract Infections.	Hou J, Wang L, Alm M, Thomsen P, Monsen T, Ramstedt M, Burmolle M.	Microorganisms	10.3390/microorganisms10061207	2022
Pathogenicity	Cytotoxin-producing Klebsiella oxytoca in the preterm gut and its association with necrotizing enterocolitis.	Paveglio S, Ledala N, Rezaul K, Lin Q, Zhou Y, Provatas AA, Bennett E, Lindberg T, Caimano M, Matson AP.	Emerg Microbes Infect	10.1080/22221751.2020.1773743	2020
	Characterization and formulation into solid dosage forms of a novel bacteriophage lytic against Klebsiella oxytoca.	Brown TL, Petrovski S, Hoyle D, Chan HT, Lock P, Tucci J.	PLoS One	10.1371/journal.pone.0183510	2017
Pathogenicity	Bacterial Indole as a Multifunctional Regulator of Klebsiella oxytoca Complex Enterotoxicity.	Ledala N, Malik M, Rezaul K, Paveglio S, Provatas A, Kiel A, Caimano M, Zhou Y, Lindgren J, Krasulova K, Illes P, Dvorak Z, Kortagere S, Kienesberger S, Cosic A, Poltl L, Zechner EL, Ghosh S, Mani S, Radolf JD, Matson AP.	mBio	10.1128/mbio.03752-21	2022
	Bile Acids: Major Regulator of the Gut Microbiome.	An C, Chon H, Ku W, Eom S, Seok M, Kim S, Lee J, Kim D, Lee S, Koo H, Cho H, Han S, Moon J, Kang M, Ryu K.	Microorganisms	10.3390/microorganisms10091792	2022
	Colorimetric sensor array for the rapid distinction and detection of various antibiotic-resistant psychrophilic bacteria in raw milk based-on machine learning.	Qin Y, Sun J, Huang W, Yue H, Meng F, Zhang M.	Food Chem X	10.1016/j.fochx.2024.101281	2024
	Evaluation of the Antidiarrheal and Antioxidant Effects of Some Chewing Sticks Commonly Used for Oral Hygiene in Ghana.	Essuman EK, Boakye AA, Tettey CO, Hunkpe G, Kortei NK, Kwansa-Bentum H, Waikhom SD, Aninagyei E.	Evid Based Complement Alternat Med	10.1155/2021/7270250	2021
	Molecular typing of cytotoxin-producing Klebsiella oxytoca isolates by 16S-23S internal transcribed spacer PCR.	Soltan Dallal MM, Validi M, Douraghi M, Bakhshi B.	New Microbes New Infect	10.1016/j.nmni.2019.100545	2019
	Phenotypic and genotypic characteristics of carbapenemase- and extended spectrum beta-lactamase-producing Klebsiella pneumoniae ozaenae clinical isolates within a hospital in Panama City.	Vega S, Acosta F, Landires I, Moran M, Gonzalez J, Pimentel-Peralta G, Nunez-Samudio V, Goodridge A.	Ther Adv Infect Dis	10.1177/20499361211054918	2021
	Adevonin, a novel synthetic antimicrobial peptide designed from the Adenanthera pavonina trypsin inhibitor (ApTI) sequence.	Rodrigues MS, de Oliveira CFR, Almeida LHO, Neto SM, Boleti APA, Dos Santos EL, Cardoso MH, Ribeiro SM, Franco OL, Rodrigues FS, Macedo AJ, Brust FR, Macedo MLR.	Pathog Glob Health	10.1080/20477724.2018.1559489	2018
Pathogenicity	Antibacterial action mechanisms and mode of trypsin inhibitors: a systematic review.	de Souza Nascimento AM, de Oliveira Segundo VH, Felipe Camelo Aguiar AJ, Piuvezam G, Souza Passos T, Florentino da Silva Chaves Damasceno KSFDS, de Araujo Morais AH.	J Enzyme Inhib Med Chem	10.1080/14756366.2022.2039918	2022
Biotechnology	Soleris®Enterobacteriaceae for the Detection of Enterobacteriaceae in Select Foods: AOAC Performance Tested MethodSM 121901.	Alles S, Roman B, Betts G, Jordan S, Everis L, Montei C, Biswas P, Mozola M, Donofrio R.	J AOAC Int	10.1093/jaoacint/qsaa001	2020
	High-Resolution Comparative and Quantitative Proteomics of Biogenic-Amine-Producing Bacteria and Virulence Factors Present in Seafood.	Abril AG, Calo-Mata P, Villa TG, Bohme K, Barros-Velazquez J, Sanchez-Perez A, Pazos M, Carrera M.	J Agric Food Chem	10.1021/acs.jafc.3c06607	2024
	Antimicrobial and Antioxidant Properties of a Bacterial Endophyte, Methylobacterium radiotolerans MAMP 4754, Isolated from Combretum erythrophyllum Seeds.	Photolo MM, Mavumengwana V, Sitole L, Tlou MG.	Int J Microbiol	10.1155/2020/9483670	2020
	Harnessing Fermented Soymilk Production by a Newly Isolated Pediococcus acidilactici F3 to Enhance Antioxidant Level with High Antimicrobial Activity against Food-Borne Pathogens during Co-Culture.	Chan S, Jantama K, Prasitpuriprecha C, Wansutha S, Phosriran C, Yuenyaow L, Cheng KC, Jantama SS.	Foods	10.3390/foods13132150	2024
	Klebsiella oxytoca Complex: Update on Taxonomy, Antimicrobial Resistance, and Virulence.	Yang J, Long H, Hu Y, Feng Y, McNally A, Zong Z.	Clin Microbiol Rev	10.1128/cmr.00006-21	2022
	Shotgun Proteomics Analysis, Functional Networks, and Peptide Biomarkers for Seafood-Originating Biogenic-Amine-Producing Bacteria.	Abril AG, Calo-Mata P, Bohme K, Villa TG, Barros-Velazquez J, Pazos M, Carrera M.	Int J Mol Sci	10.3390/ijms24097704	2023
Phylogeny	Characterisation of the symbionts in the Mediterranean fruit fly gut.	Darrington M, Leftwich PT, Holmes NA, Friend LA, Clarke NVE, Worsley SF, Margaritopolous JT, Hogenhout SA, Hutchings MI, Chapman T.	Microb Genom	10.1099/mgen.0.000801	2022
Biotechnology	Antibiogram Signatures of Some Enterobacteria Recovered from Irrigation Water and Agricultural Soil in two District Municipalities of South Africa.	Iwu CD, du Plessis EM, Korsten L, Nontongana N, Okoh AI.	Microorganisms	10.3390/microorganisms8081206	2020
Metabolism	Nitrogen Fixation in Pozol, a Traditional Fermented Beverage.	Rizo J, Rogel MA, Guillen D, Wacher C, Martinez-Romero E, Encarnacion S, Sanchez S, Rodriguez-Sanoja R.	Appl Environ Microbiol	10.1128/aem.00588-20	2020
	Cytotoxic and pathogenic properties of Klebsiella oxytoca isolated from laboratory animals.	Darby A, Lertpiriyapong K, Sarkar U, Seneviratne U, Park DS, Gamazon ER, Batchelder C, Cheung C, Buckley EM, Taylor NS, Shen Z, Tannenbaum SR, Wishnok JS, Fox JG.	PLoS One	10.1371/journal.pone.0100542	2014
	Monitoring of Bactericidal Effects of Silver Nanoparticles Based on Protein Signatures and VOC Emissions from Escherichia coli and Selected Salivary Bacteria.	Monedeiro F, Pomastowski P, Milanowski M, Ligor T, Buszewski B.	J Clin Med	10.3390/jcm8112024	2019
Pathogenicity	Chemical Characterization of Sambucus nigra L. Flowers Aqueous Extract and Its Biological Implications.	Ferreira-Santos P, Badim H, Salvador AC, Silvestre AJD, Santos SAO, Rocha SM, Sousa AM, Pereira MO, Wilson CP, Rocha CMR, Teixeira JA, Botelho CM.	Biomolecules	10.3390/biom11081222	2021
	Upcycling Polystyrene.	Capricho JC, Prasad K, Hameed N, Nikzad M, Salim N.	Polymers (Basel)	10.3390/polym14225010	2022
	Genome In Silico and In Vitro Analysis of the Probiotic Properties of a Bacterial Endophyte, Bacillus Paranthracis Strain MHSD3.	Diale MO, Kayitesi E, Serepa-Dlamini MH.	Front Genet	10.3389/fgene.2021.672149	2021
Metabolism	Identification of Bacterial Species That Can Utilize Fructose-Asparagine.	Sabag-Daigle A, Wu J, Borton MA, Sengupta A, Gopalan V, Wrighton KC, Wysocki VH, Ahmer BMM.	Appl Environ Microbiol	10.1128/aem.01957-17	2018
Phylogeny	Assessment of Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Bacterial and Yeast Identification.	Westblade LF, Garner OB, MacDonald K, Bradford C, Pincus DH, Mochon AB, Jennemann R, Manji R, Bythrow M, Lewinski MA, Burnham CA, Ginocchio CC.	J Clin Microbiol	10.1128/jcm.00187-15	2015
	Photorhabdus sp. ETL Antimicrobial Properties and Characterization of Its Secondary Metabolites by Gas Chromatography-Mass Spectrometry.	Lulamba TE, Green E, Serepa-Dlamini MH.	Life (Basel)	10.3390/life11080787	2021
Pathogenicity	Antimicrobial effect of the triterpene 3beta,6beta,16beta-trihydroxylup-20(29)-ene on planktonic cells and biofilms from Gram positive and Gram negative bacteria.	Evaristo FF, Albuquerque MR, dos Santos HS, Bandeira PN, Avila Fdo N, da Silva BR, Vasconcelos AA, Rabelo Ede M, Nascimento-Neto LG, Arruda FV, Vasconcelos MA, Carneiro VA, Cavada BS, Teixeira EH.	Biomed Res Int	10.1155/2014/729358	2014
Phylogeny	Identification of aerobic Gram-positive bacilli by use of Vitek MS.	Navas M, Pincus DH, Wilkey K, Sercia L, LaSalvia M, Wilson D, Procop GW, Richter SS.	J Clin Microbiol	10.1128/jcm.03483-13	2014
	A study of the prevalence of cytotoxic and non-cytotoxic Klebsiella oxytoca fecal colonization in two patient populations.	Smith SA, Campbell SJ, Webster D, Curley M, Leddin D, Forward KR.	Can J Infect Dis Med Microbiol	10.1155/2009/913895	2009
Pathogenicity	A thermostable Salmonella phage endolysin, Lys68, with broad bactericidal properties against gram-negative pathogens in presence of weak acids.	Oliveira H, Thiagarajan V, Walmagh M, Sillankorva S, Lavigne R, Neves-Petersen MT, Kluskens LD, Azeredo J.	PLoS One	10.1371/journal.pone.0108376	2014
Pathogenicity	Rhynchophorus palmarum (Linnaeus, 1758) (Coleoptera: Curculionidae): Guarani-Kaiowá indigenous knowledge and pharmacological activities.	Vilharva KN, Leite DF, Santos HFD, Antunes KA, Rocha PDSD, Campos JF, Almeida CV, Macedo MLR, Silva DB, Ramalho de Oliveira CF, Dos Santos EL, de Picoli Souza K.	PLoS One	10.1371/journal.pone.0249919	2021
	The Antibacterial, Antitumor Activities, and Bioactive Constituents' Identification of Alectra sessiliflora Bacterial Endophytes.	Maela MP, van der Walt H, Serepa-Dlamini MH.	Front Microbiol	10.3389/fmicb.2022.870821	2022
Enzymology	Development of a multiplex real-time PCR assay for the simultaneous detection of four bacterial pathogens causing pneumonia.	Lim HJ, Kang ER, Park MY, Kim BK, Kim MJ, Jung S, Roh KH, Sung N, Yang JH, Lee MW, Lee SH, Yang YJ.	PLoS One	10.1371/journal.pone.0253402	2021
Biotechnology	Growth inhibition of various Enterobacteriaceae species by the yeast Hansenula anomala during storage of moist cereal grain.	Olstorpe M, Schnurer J, Passoth V.	Appl Environ Microbiol	10.1128/aem.06024-11	2012
Metabolism	Characterized non-transient microbiota from stinkbug (Nezara viridula) midgut deactivates soybean chemical defenses.	Medina V, Sardoy PM, Soria M, Vay CA, Gutkind GO, Zavala JA.	PLoS One	10.1371/journal.pone.0200161	2018
Metabolism	Isolation of Bdellovibrio sp. from soil samples in Mexico and their potential applications in control of pathogens.	Oyedara OO, De Luna-Santillana EJ, Olguin-Rodriguez O, Guo X, Mendoza-Villa MA, Menchaca-Arredondo JL, Elufisan TO, Garza-Hernandez JA, Garcia Leon I, Rodriguez-Perez MA.	Microbiologyopen	10.1002/mbo3.382	2016
Phylogeny	Identification of clinical isolates of indole-positive and indole-negative Klebsiella spp.	Alves MS, Dias RC, de Castro AC, Riley LW, Moreira BM.	J Clin Microbiol	10.1128/jcm.00940-06	2006
	Structural and Enzymatic Characterization of ABgp46, a Novel Phage Endolysin with Broad Anti-Gram-Negative Bacterial Activity.	Oliveira H, Vilas Boas D, Mesnage S, Kluskens LD, Lavigne R, Sillankorva S, Secundo F, Azeredo J.	Front Microbiol	10.3389/fmicb.2016.00208	2016
Enzymology	New Klebsiella oxytoca beta-lactamase genes bla(OXY-3) and bla(OXY-4) and a third genetic group of K oxytoca based on bla(OXY-3).	Granier SA, Leflon-Guibout V, Goldstein FW, Nicolas-Chanoine MH.	Antimicrob Agents Chemother	10.1128/aac.47.9.2922-2928.2003	2003
Metabolism	Molecular and conformational basis of a specific and high-affinity interaction between AlbA and albicidin phytotoxin.	Weng LX, Wang LH, Xu JL, Wu JE, Li Q, Zhang LH.	Appl Environ Microbiol	10.1128/aem.71.3.1445-1452.2005	2005
Phylogeny	Evaluation of a rapid direct assay for identification of bacteria and the mec A and van genes from positive-testing blood cultures.	Eigner U, Weizenegger M, Fahr AM, Witte W.	J Clin Microbiol	10.1128/jcm.43.10.5256-5262.2005	2005
Phylogeny	A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community.	Joseph S, Aduse-Opoku J, Hashim A, Hanski E, Streich R, Knowles SCL, Pedersen AB, Wade WG, Curtis MA.	mSystems	10.1128/msystems.01222-20	2021
Pathogenicity	In Vitro Antibacterial Properties of Cefiderocol, a Novel Siderophore Cephalosporin, against Gram-Negative Bacteria.	Ito A, Sato T, Ota M, Takemura M, Nishikawa T, Toba S, Kohira N, Miyagawa S, Ishibashi N, Matsumoto S, Nakamura R, Tsuji M, Yamano Y.	Antimicrob Agents Chemother	10.1128/aac.01454-17	2018
	Development and evaluation of oligonucleotide chip based on the 16S-23S rRNA gene spacer region for detection of pathogenic microorganisms associated with sepsis.	Kim CM, Song ES, Jang HJ, Kim HJ, Lee S, Shin JH, Kim SJ, Jeong SH, Jeong J, Koh K, Choi GE, Lee EY, Chang CL.	J Clin Microbiol	10.1128/jcm.01130-09	2010
Pathogenicity	Molecular Assay for Detection of Genetic Markers Associated with Decreased Susceptibility to Cephalosporins in Neisseria gonorrhoeae.	Peterson SW, Martin I, Demczuk W, Bharat A, Hoang L, Wylie J, Allen V, Lefebvre B, Tyrrell G, Horsman G, Haldane D, Garceau R, Wong T, Mulvey MR.	J Clin Microbiol	10.1128/jcm.00493-15	2015
Enzymology	Molecular method for detection of total coliforms in drinking water samples.	Maheux AF, Boudreau DK, Bisson MA, Dion-Dupont V, Bouchard S, Nkuranga M, Bergeron MG, Rodriguez MJ.	Appl Environ Microbiol	10.1128/aem.00546-14	2014
	Non-Antibiotics Strategies to Control Salmonella Infection in Poultry.	Ruvalcaba-Gomez JM, Villagran Z, Valdez-Alarcon JJ, Martinez-Nunez M, Gomez-Godinez LJ, Ruesga-Gutierrez E, Anaya-Esparza LM, Arteaga-Garibay RI, Villarruel-Lopez A.	Animals (Basel)	10.3390/ani12010102	2022
Phylogeny	Use of the BD PHOENIX Automated Microbiology System for direct identification and susceptibility testing of gram-negative rods from positive blood cultures in a three-phase trial.	Funke G, Funke-Kissling P.	J Clin Microbiol	10.1128/jcm.42.4.1466-1470.2004	2004
Phylogeny	Multicenter evaluation of the Vitek MS matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of Gram-positive aerobic bacteria.	Rychert J, Burnham CA, Bythrow M, Garner OB, Ginocchio CC, Jennemann R, Lewinski MA, Manji R, Mochon AB, Procop GW, Richter SS, Sercia L, Westblade LF, Ferraro MJ, Branda JA.	J Clin Microbiol	10.1128/jcm.00682-13	2013
Phylogeny	Recommended test panel for differentiation of Klebsiella species on the basis of a trilateral interlaboratory evaluation of 18 biochemical tests.	Hansen DS, Aucken HM, Abiola T, Podschun R.	J Clin Microbiol	10.1128/jcm.42.8.3665-3669.2004	2004
	Intervening sequences in rrl genes and fragmentation of 23S rRNA in genera of the family Enterobacteriaceae.	Pronk LM, Sanderson KE.	J Bacteriol	10.1128/jb.183.19.5782-5787.2001	2001
Phylogeny	Method for differentiating Klebsiella planticola and Klebsiella terrigena from other Klebsiella species.	Monnet D, Freney J.	J Clin Microbiol	10.1128/jcm.32.4.1121-1122.1994	1994
Pathogenicity	gyrA mutations associated with fluoroquinolone resistance in eight species of Enterobacteriaceae.	Weigel LM, Steward CD, Tenover FC.	Antimicrob Agents Chemother	10.1128/aac.42.10.2661	1998
Enzymology	Development of a rapid PCR assay specific for Staphylococcus saprophyticus and application to direct detection from urine samples.	Martineau F, Picard FJ, Menard C, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.38.9.3280-3284.2000	2000
Pathogenicity	Novel polymyxin derivatives carrying only three positive charges are effective antibacterial agents.	Vaara M, Fox J, Loidl G, Siikanen O, Apajalahti J, Hansen F, Frimodt-Moller N, Nagai J, Takano M, Vaara T.	Antimicrob Agents Chemother	10.1128/aac.00405-08	2008
Phylogeny	Development of a PCR assay for identification of staphylococci at genus and species levels.	Martineau F, Picard FJ, Ke D, Paradis S, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.39.7.2541-2547.2001	2001
	Analysis of the type 1 pilin gene cluster fim in Salmonella: its distinct evolutionary histories in the 5' and 3' regions.	Boyd EF, Hartl DL.	J Bacteriol	10.1128/jb.181.4.1301-1308.1999	1999
Enzymology	Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species.	Picard FJ, Ke D, Boudreau DK, Boissinot M, Huletsky A, Richard D, Ouellette M, Roy PH, Bergeron MG.	J Clin Microbiol	10.1128/jcm.42.8.3686-3695.2004	2004
Enzymology	Detection of bacteria in red blood cell concentrates by the Scansystem method.	Ribault S, Faucon A, Grave L, Nannini P, Faure IB.	J Clin Microbiol	10.1128/jcm.43.5.2251-2255.2005	2005
Enzymology	Rapid concentration and molecular enrichment approach for sensitive detection of Escherichia coli and Shigella species in potable water samples.	Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppe V, Picard FJ, Berube E, Bergeron MG.	Appl Environ Microbiol	10.1128/aem.02337-10	2011
	Development of a PCR assay for rapid detection of enterococci.	Ke D, Picard FJ, Martineau F, Menard C, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.37.11.3497-3503.1999	1999
	Transposition of IS1397 in the family Enterobacteriaceae and first characterization of ISKpn1, a new insertion sequence associated with Klebsiella pneumoniae palindromic units.	Wilde C, Bachellier S, Hofnung M, Clement JM.	J Bacteriol	10.1128/jb.183.15.4395-4404.2001	2001
Metabolism	SdiA of Salmonella enterica is a LuxR homolog that detects mixed microbial communities.	Michael B, Smith JN, Swift S, Heffron F, Ahmer BM.	J Bacteriol	10.1128/jb.183.19.5733-5742.2001	2001
Metabolism	TaqMan PCR for detection of Vibrio cholerae O1, O139, non-O1, and non-O139 in pure cultures, raw oysters, and synthetic seawater.	Lyon WJ.	Appl Environ Microbiol	10.1128/aem.67.10.4685-4693.2001	2001
Metabolism	Fermentation of polysaccharides by Klebsielleae and other facultative bacilli.	Ochuba GU, von Riesen VL.	Appl Environ Microbiol	10.1128/aem.39.5.988-992.1980	1980
Pathogenicity	Induction of the alkA gene of Escherichia coli in gram-negative bacteria.	Fernandez de Henestrosa AR, Barbe J.	J Bacteriol	10.1128/jb.173.23.7736-7740.1991	1991
	Multiple copies of IS10 in the Enterobacter cloacae MD36 chromosome.	Matsutani S.	J Bacteriol	10.1128/jb.173.24.7802-7809.1991	1991
Phylogeny	Escherichia fergusonii and Enterobacter taylorae, two new species of Enterobacteriaceae isolated from clinical specimens.	Farmer JJ, Fanning GR, Davis BR, O'Hara CM, Riddle C, Hickman-Brenner FW, Asbury MA, Lowery VA, Brenner DJ.	J Clin Microbiol	10.1128/jcm.21.1.77-81.1985	1985
	Rapid microimmunodiffusion method with species-specific antiserum raised to purified antigen for identification of Vibrio vulnificus.	Nishibuchi M, Seidler RJ.	J Clin Microbiol	10.1128/jcm.21.1.102-107.1985	1985
	DNA probe specific for Legionella pneumophila.	Grimont PA, Grimont F, Desplaces N, Tchen P.	J Clin Microbiol	10.1128/jcm.21.3.431-437.1985	1985
Enzymology	Kinetic and thermodynamic investigation of Rhodanese synthesized by enhanced Klebsiella oxytoca JCM 1665 strain: a comparative between the free and immobilized enzyme entrapped in alginate beads.	Itakorode BO, Itakorode DI, Torimiro N, Okonji RE.	Prep Biochem Biotechnol	10.1080/10826068.2024.2347407	2024
Metabolism	Symbiotic bacteria participate in pectinolytic metabolism to enhance larval growth in Zeugodacus cucurbitae.	Chen G, Tian Z, Yue Y, Gao X, Chen H, Yang J, Ma W, Zheng D, Tan H, Zhou Z.	Pest Manag Sci	10.1002/ps.70035	2025
	Resistance on the rise: Assessment of antibiotic-resistant indicator organisms in Shem Creek, Charleston, South Carolina.	Emery B, Fullerton H, Bossak B.	Dialogues Health	10.1016/j.dialog.2022.100063	2022
Phylogeny	Type material in the NCBI Taxonomy Database.	Federhen S.	Nucleic Acids Res	10.1093/nar/gku1127	2015
Genetics	Comparative genomics of Klebsiella michiganensis BD177 and related members of Klebsiella sp. reveal the symbiotic relationship with Bactrocera dorsalis.	Cai Z, Guo Q, Yao Z, Zheng W, Xie J, Bai S, Zhang H.	BMC Genet	10.1186/s12863-020-00945-0	2020
Metabolism	Klebsiella pneumoniae produces no histamine: Raoultella planticola and Raoultella ornithinolytica strains are histamine producers.	Kanki M, Yoda T, Tsukamoto T, Shibata T.	Appl Environ Microbiol	10.1128/aem.68.7.3462-3466.2002	2002
	Characterization of IncI1 sequence type 71 epidemic plasmid lineage responsible for the recent dissemination of CTX-M-65 extended-spectrum beta-lactamase in the Bolivian Chaco region.	Riccobono E, Di Pilato V, Di Maggio T, Revollo C, Bartoloni A, Pallecchi L, Rossolini GM.	Antimicrob Agents Chemother	10.1128/aac.00589-15	2015
	A novel real-time PCR assay for specific detection of Brucella melitensis.	Kaden R, Ferrari S, Alm E, Wahab T.	BMC Infect Dis	10.1186/s12879-017-2327-7	2017
	Exploring the Potential Probiotic Properties of Bifidobacterium breve DSM 32583-A Novel Strain Isolated from Human Milk.	Kujawska M, Neuhaus K, Huptas C, Jimenez E, Arboleya S, Schaubeck M, Hall LJ.	Probiotics Antimicrob Proteins	10.1007/s12602-024-10346-9	2025
Genetics	Characterization of a Ligilactobacillus salivarius Strain Isolated from a Cheese Seal Which Was Last Used in 1936.	Alba C, Arroyo R, Fernandez L, Narbad A, Rodriguez JM.	Foods	10.3390/foods13132005	2024
	Ultrasound assisted extraction and liposome encapsulation of olive leaves and orange peels: How to transform biomass waste into valuable resources with antimicrobial activity.	Prevete G, Carvalho LG, Del Carmen Razola-Diaz M, Verardo V, Mancini G, Fiore A, Mazzonna M.	Ultrason Sonochem	10.1016/j.ultsonch.2024.106765	2024
Phylogeny	Identification of robust species-specific marker genes for the demarcation of the Klebsiella pneumoniae-quasipneumoniae-variicola complex.	Galib M, Nguyen VH.	J Med Microbiol	10.1099/jmm.0.002102	2025
Genetics	Comprehensive genomics reveals novel sequence types of multidrug resistant Klebsiella oxytoca with uncharacterized capsular polysaccharide K- and lipopolysaccharide O-antigen loci from the National Hospital of Uganda.	Maghembe RS, Magulye MAK, Makaranga A, Moto E, Sekyanzi S, Mwesigwa S, Katagirya E.	Infect Genet Evol	10.1016/j.meegid.2024.105640	2024
	Microbial Screening Based on the Mizoroki-Heck Reaction Permits Exploration of Hydroxyhexylitaconic-Acid-Producing Fungi in Soils.	Sano M, Yada R, Nomura Y, Kusukawa T, Ando H, Matsumoto K, Wada K, Tanaka T, Ohara H, Aso Y.	Microorganisms	10.3390/microorganisms8050648	2020
Metabolism	Diversity and antimicrobial activities of actinobacteria isolated from tropical mangrove sediments in Malaysia.	Lee LH, Zainal N, Azman AS, Eng SK, Goh BH, Yin WF, Ab Mutalib NS, Chan KG.	ScientificWorldJournal	10.1155/2014/698178	2014
	Novel Drexlerviridae bacteriophage KMI8 with specific lytic activity against Klebsiella michiganensis and its biofilms.	Ku H, Kabwe M, Chan HT, Stanton C, Petrovski S, Batinovic S, Tucci J.	PLoS One	10.1371/journal.pone.0257102	2021
	Antibacterial activity of methylated egg white proteins against pathogenic G(+) and G(-) bacteria matching antibiotics.	Abdel-Shafi S, Osman A, Enan G, El-Nemer M, Sitohy M.	Springerplus	10.1186/s40064-016-2625-3	2016
	Microbial inhibition of oral epithelial wound recovery: potential role for quorum sensing molecules?	De Ryck T, Vanlancker E, Grootaert C, Roman BI, De Coen LM, Vandenberghe I, Stevens CV, Bracke M, Van de Wiele T, Vanhoecke B.	AMB Express	10.1186/s13568-015-0116-5	2015
	Flow Cytometric Single-Cell Identification of Populations in Synthetic Bacterial Communities.	Rubbens P, Props R, Boon N, Waegeman W.	PLoS One	10.1371/journal.pone.0169754	2017
Metabolism	Tenebrio molitor: possible source of polystyrene-degrading bacteria.	Machona O, Chidzwondo F, Mangoyi R	BMC Biotechnol	10.1186/s12896-021-00733-3	2022
	The Antibacterial Activity of Crude Extracts of Secondary Metabolites from Bacterial Endophytes Associated with Dicoma anomala.	Makuwa SC, Serepa-Dlamini MH	Int J Microbiol	10.1155/2021/8812043	2021
Pathogenicity	In vitro assessment of Pediococcus acidilactici Kp10 for its potential use in the food industry.	Abbasiliasi S, Tan JS, Bashokouh F, Ibrahim TAT, Mustafa S, Vakhshiteh F, Sivasamboo S, Ariff AB	BMC Microbiol	10.1186/s12866-017-1000-z	2017
Metabolism	Production of Biohydrogen from Wastewater by Klebsiella oxytoca ATCC 13182.	Thakur V, Tiwari KL, Jadhav SK	Water Environ Res	10.2175/106143015X14338845156740	2015
Enzymology	Identification of the 4-hydroxycinnamate decarboxylase (PAD) gene of Klebsiella oxytoca.	Uchiyama H, Hashidoko Y, Kuriyama Y, Tahara S	Biosci Biotechnol Biochem	10.1271/bbb.70496	2008
Metabolism	Identification of the essential histidine residue for high-affinity binding of AlbA protein to albicidin antibiotics.	Weng LX, Xu JL, Li Q, Birch RG, Zhang LH	Microbiology (Reading)	10.1099/mic.0.25942-0	2003
Pathogenicity	Enterotoxic activity of Klebsiella oxytoca cytotoxin in rabbit intestinal loops.	Minami J, Katayama S, Matsushita O, Sakamoto H, Okabe A	Infect Immun	10.1128/iai.62.1.172-177.1994	1994
Phylogeny	Production of a unique cytotoxin by Klebsiella oxytoca.	Minami J, Okabe A, Shiode J, Hayashi H	Microb Pathog	10.1016/0882-4010(89)90056-9	1989
Genetics	Bdellovibrio reynosensis sp. nov., from a Mexico soil sample.	Ajao YO, Rodriguez-Luna IC, Elufisan TO, Sanchez-Varela A, Cortes-Espinosa DV, Camilli A, Guo X.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005608	2022
Phylogeny	Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.	Merla C, Rodrigues C, Passet V, Corbella M, Thorpe HA, Kallonen TVS, Zong Z, Marone P, Bandi C, Sassera D, Corander J, Feil EJ, Brisse S.	Front Microbiol	10.3389/fmicb.2019.02360	2019
Phylogeny	Enterobacter asburiae sp. nov., a new species found in clinical specimens, and reassignment of Erwinia dissolvens and Erwinia nimipressuralis to the genus Enterobacter as Enterobacter dissolvens comb. nov. and Enterobacter nimipressuralis comb. nov.	Brenner DJ, McWhorter AC, Kai A, Steigerwalt AG, Farmer JJ.	J Clin Microbiol	10.1128/jcm.23.6.1114-1120.1986	1986

References

#1950	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5175
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#34208	; Curators of the CIP;
#46330	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 15717
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68382	Automatically annotated from API zym .
#121493	Collection of Institut Pasteur ; Curators of the CIP; CIP 103434
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Klebsiella oxytoca (DSM 5175, ATCC 13182, IAM 14201)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

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Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Antibiotic resistance

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Metabolite tests

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API 20E

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API biotype100

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Genome browser: GCA_001598695

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