Thioalkalivibrio thiocyanodenitrificans DSM 16954 is a bacterium that was isolated from mixed sediment samples from 8 hypersaline, alkaline lakes.
genome sequence 16S sequence Bacteria| @ref 20215 |
Last LPSN update
2026-02-09 11:18:41 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Chromatiales |
| Family Ectothiorhodospiraceae |
| Genus Thioalkalivibrio |
| Species Thioalkalivibrio thiocyanodenitrificans |
| Full scientific name Thioalkalivibrio thiocyanodenitrificans corrig. Sorokin et al. 2005 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 6666 | THIOALKALIVIBRIO THIOCYANODENITRIFICANS MEDIUM (DSMZ Medium 1228) | Medium recipe at MediaDive  | Name: THIOALKALIVIBRIO THIOCYANODENITRIFICANS MEDIUM (DSMZ Medium 1228) Composition: Na2CO3 22.0 g/l Sodium thiosulfate pentahydrate 9.92744 g/l NaHCO3 8.0 g/l NaCl 5.0 g/l K2HPO4 1.0 g/l KSCN 0.9718 g/l H3BO3 0.0006 g/l CoCl2 x 6 H2O 0.0004 g/l ZnSO4 x 7 H2O 0.0002 g/l MnCl2 x 4 H2O 6e-05 g/l Na2MoO4 x 2 H2O 6e-05 g/l NiCl2 x 6 H2O 4e-05 g/l CuCl2 x 2 H2O 2e-05 g/l EDTA 1e-05 g/l FeSO4 x 7 H2O 4e-06 g/l MgCl2 x 6 H2O Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 6666 | positive | growth | 28 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Environmental | #Aquatic | #Lake (large) | |
| #Environmental | #Aquatic | #Sediment | |
| #Condition | #Alkaline | - | |
| #Condition | #Saline | - |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 6666 | mixed sediment samples from 8 hypersaline, alkaline lakes | Wadi Natrun | Egypt | EGY | Africa |
Global distribution of 16S sequence AY360060 (>99% sequence identity) for Thioalkalivibrio from Microbeatlas 
 Aquatic Samples |
194 |
 Soil Samples |
63 |
 Animal Samples |
1040 |
 Plant Samples |
6 |
| Total Samples | 1303 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM37896v1 assembly for Thioalkalivibrio thiocyanodenitrificans ARhD 1 | scaffold | GCA_000378965   | 713586.3  | 2516143028  | 713586 | 70.89 |  |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 6666 | Thialkalivibrio thiocyanodenitrificans strain ARhD 16S ribosomal RNA gene, partial sequence | AY360060 | 1442 |  | 713586 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Partial genome sequence of Thioalkalivibrio thiocyanodenitrificans ARhD 1(T), a chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium capable of complete denitrification. | Berben T, Sorokin DY, Ivanova N, Pati A, Kyrpides N, Goodwin LA, Woyke T, Muyzer G. | Stand Genomic Sci | 10.1186/s40793-015-0080-3 | 2015 | | |
| Metabolism | Exploring anaerobic environments for cyanide and cyano-derivatives microbial degradation. | Luque-Almagro VM, Cabello P, Saez LP, Olaya-Abril A, Moreno-Vivian C, Roldan MD. | Appl Microbiol Biotechnol | 10.1007/s00253-017-8678-6 | 2018 | |
| Enzymology | Comparative Genome Analysis of Three Thiocyanate Oxidizing Thioalkalivibrio Species Isolated from Soda Lakes. | Berben T, Overmars L, Sorokin DY, Muyzer G. | Front Microbiol | 10.3389/fmicb.2017.00254 | 2017 | |
| Enzymology | Comparative Genomics of Thiohalobacter thiocyanaticus HRh1T and Guyparkeria sp. SCN-R1, Halophilic Chemolithoautotrophic Sulfur-Oxidizing Gammaproteobacteria Capable of Using Thiocyanate as Energy Source. | Tsallagov SI, Sorokin DY, Tikhonova TV, Popov VO, Muyzer G. | Front Microbiol | 10.3389/fmicb.2019.00898 | 2019 | |
| Metabolism | Coregulated genes link sulfide:quinone oxidoreductase and arsenic metabolism in Synechocystis sp. strain PCC6803. | Nagy CI, Vass I, Rakhely G, Vass IZ, Toth A, Duzs A, Peca L, Kruk J, Kos PB. | J Bacteriol | 10.1128/jb.01864-14 | 2014 | |
| Microbiome Dynamics of a Polychlorobiphenyl (PCB) Historically Contaminated Marine Sediment under Conditions Promoting Reductive Dechlorination. | Matturro B, Ubaldi C, Rossetti S. | Front Microbiol | 10.3389/fmicb.2016.01502 | 2016 | | |
| Phylogeny | Broad Phylogenetic Diversity Associated with Nitrogen Loss through Sulfur Oxidation in a Large Public Marine Aquarium. | Burns AS, Padilla CC, Pratte ZA, Gilde K, Regensburger M, Hall E, Dove ADM, Stewart FJ. | Appl Environ Microbiol | 10.1128/aem.01250-18 | 2018 | |
| Pyrosequencing of bacterial symbionts within Axinella corrugata sponges: diversity and seasonal variability. | White JR, Patel J, Ottesen A, Arce G, Blackwelder P, Lopez JV. | PLoS One | 10.1371/journal.pone.0038204 | 2012 | | |
| Dissociation of the NIC plasmid aggregate in Pseudomonas putida. | Thacker R, Gunsalus IC. | J Bacteriol | 10.1128/jb.137.1.697-699.1979 | 1979 | | |
| BimD/SPO76 is at the interface of cell cycle progression, chromosome morphogenesis, and recombination. | van Heemst D, Kafer E, John T, Heyting C, van Aalderen M, Zickler D. | Proc Natl Acad Sci U S A | 10.1073/pnas.081088498 | 2001 | | |
| Phylogeny | Woeseia oceani gen. nov., sp. nov., a chemoheterotrophic member of the order Chromatiales, and proposal of Woeseiaceae fam. nov. | Du ZJ, Wang ZJ, Zhao JX, Chen GJ. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000683 | 2016 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive4297.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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