Thioalkalivibrio nitratireducens (DSM 14787, UNIQEM 213, ALEN 2)

Name: Thioalkalivibrio nitratireducens (DSM 14787, UNIQEM 213, ALEN 2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 4296

Type strain

Culture col. no. DSM 14787 UNIQEM 213 ALEN 2

NCBI tax ID(s) 1255043 186931

Special Collections DSMZ

Links

Thioalkalivibrio nitratireducens DSM 14787 is a mesophilic prokaryote that was isolated from soda lake Fazdah.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 401264

DSM 14787

@ref 20215

Last LPSN update 2025-12-16 09:47:46

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Chromatiales

Family Ectothiorhodospiraceae

Genus Thioalkalivibrio

Species Thioalkalivibrio nitratireducens

Full scientific name Thioalkalivibrio nitratireducens corrig. Sorokin et al. 2003

Synonyms (1)

Thialkalivibrio nitratireducens

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	97.5

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
5541	ALKALIPHILIC SULPHUR RESPIRING STRAINS MEDIUM (DSMZ Medium 925)		Medium recipe at MediaDive	Name: ALKALIPHILIC SULPHUR RESPIRING STRAINS MEDIUM (DSMZ Medium 925) Composition: Na2CO3 20.0 g/l NaHCO3 10.0 g/l NaCl 5.0 g/l K2HPO4 1.0 g/l MgCl2 x 6 H2O 0.2 g/l H3BO3 0.0006 g/l CoCl2 x 6 H2O 0.0004 g/l ZnSO4 x 7 H2O 0.0002 g/l Na2MoO4 x 2 H2O 6e-05 g/l MnCl2 x 4 H2O 6e-05 g/l NiCl2 x 6 H2O 4e-05 g/l CuCl2 x 2 H2O 2e-05 g/l EDTA 1e-05 g/l FeSO4 x 7 H2O 4e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5541	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	aerobe	93.7

Spore formation

@ref	Spore formation	Confidence
125438		93.333

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	ubiquinone biosynthesis	100	7 of 7
66794	vitamin K metabolism	100	5 of 5
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	hydrogen production	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	glycogen metabolism	100	5 of 5
66794	photosynthesis	100	14 of 14
66794	biotin biosynthesis	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	folate polyglutamylation	100	1 of 1
66794	cardiolipin biosynthesis	100	7 of 7
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	lipoate biosynthesis	100	5 of 5
66794	denitrification	100	2 of 2
66794	NAD metabolism	94.44	17 of 18
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	starch degradation	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	d-mannose degradation	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	heme metabolism	85.71	12 of 14
66794	pentose phosphate pathway	81.82	9 of 11
66794	metabolism of disaccharids	81.82	9 of 11
66794	flavin biosynthesis	80	12 of 15
66794	glycine betaine biosynthesis	80	4 of 5
66794	methylglyoxal degradation	80	4 of 5
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	phenylalanine metabolism	76.92	10 of 13
66794	vitamin B1 metabolism	76.92	10 of 13
66794	alanine metabolism	75.86	22 of 29
66794	gluconeogenesis	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	glutamate and glutamine metabolism	75	21 of 28
66794	purine metabolism	73.4	69 of 94
66794	peptidoglycan biosynthesis	73.33	11 of 15
66794	proline metabolism	72.73	8 of 11
66794	vitamin B6 metabolism	72.73	8 of 11
66794	glutathione metabolism	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	isoprenoid biosynthesis	69.23	18 of 26
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	cyanate degradation	66.67	2 of 3
66794	enterobactin biosynthesis	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	pyrimidine metabolism	66.67	30 of 45
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	non-pathway related	65.79	25 of 38
66794	methionine metabolism	65.38	17 of 26
66794	citric acid cycle	64.29	9 of 14
66794	ketogluconate metabolism	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	sulfate reduction	61.54	8 of 13
66794	leucine metabolism	61.54	8 of 13
66794	lipid metabolism	61.29	19 of 31
66794	threonine metabolism	60	6 of 10
66794	propionate fermentation	60	6 of 10
66794	benzoyl-CoA degradation	57.14	4 of 7
66794	cysteine metabolism	55.56	10 of 18
66794	nitrate assimilation	55.56	5 of 9
66794	histidine metabolism	55.17	16 of 29
66794	oxidative phosphorylation	54.95	50 of 91
66794	arginine metabolism	54.17	13 of 24
66794	polyamine pathway	52.17	12 of 23
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	lysine metabolism	50	21 of 42
66794	ethanol fermentation	50	1 of 2
66794	resorcinol degradation	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	glycine metabolism	50	5 of 10
66794	phenylmercury acetate degradation	50	1 of 2
66794	tyrosine metabolism	50	7 of 14
66794	tryptophan metabolism	47.37	18 of 38
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	degradation of hexoses	44.44	8 of 18
66794	vitamin B12 metabolism	44.12	15 of 34
66794	propanol degradation	42.86	3 of 7
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	Entner Doudoroff pathway	40	4 of 10
66794	arachidonate biosynthesis	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	degradation of pentoses	39.29	11 of 28
66794	phosphatidylethanolamine bioynthesis	38.46	5 of 13
66794	androgen and estrogen metabolism	37.5	6 of 16
66794	cholesterol biosynthesis	36.36	4 of 11
66794	phenol degradation	35	7 of 20
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	3-phenylpropionate degradation	33.33	5 of 15
66794	methane metabolism	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	4-hydroxymandelate degradation	33.33	3 of 9
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	urea cycle	30.77	4 of 13
66794	myo-inositol biosynthesis	30	3 of 10
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	chlorophyll metabolism	27.78	5 of 18
66794	arachidonic acid metabolism	27.78	5 of 18
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	carotenoid biosynthesis	27.27	6 of 22
66794	carnitine metabolism	25	2 of 8
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	methanogenesis from CO2	25	3 of 12
66794	allantoin degradation	22.22	2 of 9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Lake (large)
#Condition	#Alkaline	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
5541	soda lake Fazdah	Egypt	EGY	Africa

Taxonmaps

69479

Global distribution of 16S sequence AY079010 (>99% sequence identity) for Thioalkalivibrio from Microbeatlas

Aquatic Samples	2
Soil Samples
Animal Samples
Plant Samples
Total Samples	2

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5541	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	BV-BRC accession	NCBI tax ID	Score
66792	Thioalkalivibrio nitratireducens DSM 14787	complete	1255043.3	1255043	98.8
66792	ASM32141v2 assembly for Thioalkalivibrio nitratireducens DSM 14787	complete	1255043.27	1255043	94.1

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
5541	Thialkalivibrio nitratreducens 16S ribosomal RNA gene, partial sequence	AY079010	1420		1255043

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Thioalkalivibrio nitratireducens DSM 14787
NCBI: GCA_000321415

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	93.70	no
125439	gram_stain	BacteriaNetⓘ	negative	89.90	no
125439	motility	BacteriaNetⓘ	yes	70.70	no
125439	spore_formation	BacteriaNetⓘ	no	86.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thioalkalivibrio nitratireducens DSM 14787 DSM 14787
NCBI: GCA_000321415.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.50	no
125438	anaerobic	anaerobicⓘ	no	70.94	no
125438	aerobic	aerobicⓘ	no	54.57	no
125438	spore-forming	spore-formingⓘ	no	93.33	no
125438	thermophilic	thermophileⓘ	no	92.90	yes
125438	flagellated	motile2+ⓘ	no	66.13	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Arsenite Oxidation by a Newly Isolated Betaproteobacterium Possessing arx Genes and Diversity of the arx Gene Cluster in Bacterial Genomes.	Ospino MC, Kojima H, Fukui M.	Front Microbiol	10.3389/fmicb.2019.01210	2019
Genetics	Effect of polybrominated diphenyl ether (PBDE) treatment on the composition and function of the bacterial community in the sponge Haliclona cymaeformis.	Tian RM, Lee OO, Wang Y, Cai L, Bougouffa S, Chiu JM, Wu RS, Qian PY.	Front Microbiol	10.3389/fmicb.2014.00799	2014
Proteome	Ecophysiology of Thioploca ingrica as revealed by the complete genome sequence supplemented with proteomic evidence.	Kojima H, Ogura Y, Yamamoto N, Togashi T, Mori H, Watanabe T, Nemoto F, Kurokawa K, Hayashi T, Fukui M.	ISME J	10.1038/ismej.2014.209	2015
	Mutation study of DsrM from Allochromatium vinosum using the amino acid sequences.	Ghosh S, Bagchi A.	Meta Gene	10.1016/j.mgene.2013.10.006	2013
Metabolism	Discovery of PPi-type Phosphoenolpyruvate Carboxykinase Genes in Eukaryotes and Bacteria.	Chiba Y, Kamikawa R, Nakada-Tsukui K, Saito-Nakano Y, Nozaki T.	J Biol Chem	10.1074/jbc.m115.672907	2015
	Advances in Understanding Carboxysome Assembly in Prochlorococcus and Synechococcus Implicate CsoS2 as a Critical Component.	Cai F, Dou Z, Bernstein SL, Leverenz R, Williams EB, Heinhorst S, Shively J, Cannon GC, Kerfeld CA.	Life (Basel)	10.3390/life5021141	2015
	First Record of Microbiomes of Sponges Collected From the Persian Gulf, Using Tag Pyrosequencing.	Najafi A, Moradinasab M, Nabipour I.	Front Microbiol	10.3389/fmicb.2018.01500	2018
	An ancient autoproteolytic domain found in GAIN, ZU5 and Nucleoporin98.	Liao Y, Pei J, Cheng H, Grishin NV.	J Mol Biol	10.1016/j.jmb.2014.10.011	2014
Metabolism	Electroautotrophy of Thioalkalivibrio nitratireducens.	Rimboud M, Achouak W.	Bioelectrochemistry	10.1016/j.bioelechem.2018.11.001	2019
Metabolism	Structural study of the X-ray-induced enzymatic reaction of octahaem cytochrome C nitrite reductase.	Trofimov AA, Polyakov KM, Lazarenko VA, Popov AN, Tikhonova TV, Tikhonov AV, Popov VO.	Acta Crystallogr D Biol Crystallogr	10.1107/s1399004715003053	2015
Enzymology	Characterization of DsrD and its interaction with the DsrAB dissimilatory sulfite reductase.	Barbosa ACC, Venceslau SS, Ferreira D, Neukirchen S, Sousa FL, Melo MN, Pereira IAC.	Protein Sci	10.1002/pro.5222	2024
Proteome	A novel mechanism for dissimilatory nitrate reduction to ammonium in Acididesulfobacillus acetoxydans.	Egas RA, Kurth JM, Boeren S, Sousa DZ, Welte CU, Sanchez-Andrea I.	mSystems	10.1128/msystems.00967-23	2024
Metabolism	Isolation and preliminary characterization of new cytochrome c from autotrophic haloalkaliphilic sulfur-oxidizing bacterium Thioalkalivibrio nitratireducens.	Antipov AN, Tishkov VI.	Biochimie	10.1016/j.biochi.2012.07.004	2012
Enzymology	Three-Dimensional Structure of Cytochrome c Nitrite Reductase As Determined by Cryo-Electron Microscopy.	Baymukhametov TN, Chesnokov YM, Pichkur EB, Boyko KM, Tikhonova TV, Myasnikov AG, Vasiliev AL, Lipkin AV, Popov VO, Kovalchuk MV.	Acta Naturae	10.32607/20758251-2018-10-3-48-56	2018
Metabolism	Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide.	Trofimov AA, Polyakov KM, Boyko KM, Tikhonova TV, Safonova TN, Tikhonov AV, Popov AN, Popov VO.	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444910031665	2010
Metabolism	Contrasting catalytic profiles of multiheme nitrite reductases containing CxxCK heme-binding motifs.	Doyle RM, Marritt SJ, Gwyer JD, Lowe TG, Tikhonova TV, Popov VO, Cheesman MR, Butt JN.	J Biol Inorg Chem	10.1007/s00775-013-1011-7	2013
Enzymology	Isolation and oligomeric composition of cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens.	Tikhonova TV, Slutskaya ES, Filimonenkov AA, Boyko KM, Kleimenov SY, Konarev PV, Polyakov KM, Svergun DI, Trofimov AA, Khomenkov VG, Zvyagilskaya RA, Popov VO.	Biochemistry (Mosc)	10.1134/s0006297908020077	2008
Enzymology	High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens.	Polyakov KM, Boyko KM, Tikhonova TV, Slutsky A, Antipov AN, Zvyagilskaya RA, Popov AN, Bourenkov GP, Lamzin VS, Popov VO.	J Mol Biol	10.1016/j.jmb.2009.04.037	2009
	Characterization of RNA-based and protein-only RNases P from bacteria encoding both enzyme types.	Gossringer M, Waber NB, Wiegard JC, Hartmann RK.	RNA	10.1261/rna.079459.122	2023
Metabolism	Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity.	Trofimov AA, Polyakov KM, Tikhonova TV, Tikhonov AV, Safonova TN, Boyko KM, Dorovatovskii PV, Popov VO.	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444911052632	2012
Metabolism	Metatranscriptomic analysis of prokaryotic communities active in sulfur and arsenic cycling in Mono Lake, California, USA.	Edwardson CF, Edwardson CF, Hollibaugh JT.	ISME J	10.1038/ismej.2017.80	2017
Metabolism	Characterization of the active site and calcium binding in cytochrome c nitrite reductases.	Lockwood CW, Clarke TA, Butt JN, Hemmings AM, Richardson DJ.	Biochem Soc Trans	10.1042/bst20110731	2011
	Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia.	Sorokin DY, Tikhonova TV, Koch H, van den Berg EM, Hinderks RS, Pabst M, Dergousova NI, Soloveva AY, Kuenen GJ, Popov VO, van Loosdrecht MCM, Lucker S.	ISME J	10.1038/s41396-023-01473-2	2023
Metabolism	Is vanadium a more versatile target in the activity of primordial life forms than hitherto anticipated?	Rehder D.	Org Biomol Chem	10.1039/b717565p	2008
Phylogeny	Phylogeny and evolution of the family Ectothiorhodospiraceae based on comparison of 16S rRNA, cbbL and nifH gene sequences.	Tourova TP, Spiridonova EM, Berg IA, Slobodova NV, Boulygina ES, Sorokin DY.	Int J Syst Evol Microbiol	10.1099/ijs.0.65041-0	2007
Enzymology	Crystallization and preliminary X-ray analysis of cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens.	Boyko KM, Polyakov KM, Tikhonova TV, Slutsky A, Antipov AN, Zvyagilskaya RA, Bourenkov GP, Popov AN, Lamzin VS, Popov VO.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s174430910600296x	2006
	Accurate Representation of Protein-Ligand Structural Diversity in the Protein Data Bank (PDB).	Shinada NK, Schmidtke P, de Brevern AG.	Int J Mol Sci	10.3390/ijms21062243	2020
Enzymology	Structural adaptations of octaheme nitrite reductases from haloalkaliphilic Thioalkalivibrio bacteria to alkaline pH and high salinity.	Popinako A, Antonov M, Tikhonov A, Tikhonova T, Popov V.	PLoS One	10.1371/journal.pone.0177392	2017
Enzymology	Identification, Expression and Activity of Candidate Nitrite Reductases From Orange Beggiatoaceae, Guaymas Basin.	Buckley A, MacGregor B, Teske A.	Front Microbiol	10.3389/fmicb.2019.00644	2019
Phylogeny	Refined NrfA phylogeny improves PCR-based nrfA gene detection.	Welsh A, Chee-Sanford JC, Connor LM, Loffler FE, Sanford RA.	Appl Environ Microbiol	10.1128/aem.03443-13	2014
Enzymology	Involvement of beta-Carbonic Anhydrase Genes in Bacterial Genomic Islands and Their Horizontal Transfer to Protists.	Zolfaghari Emameh R, Barker HR, Hytonen VP, Parkkila S.	Appl Environ Microbiol	10.1128/aem.00771-18	2018
Pathogenicity	Cross-Kingdom Analysis of Diversity, Evolutionary History, and Site Selection within the Eukaryotic Macrophage Migration Inhibitory Factor Superfamily.	Michelet C, Danchin EGJ, Jaouannet M, Bernhagen J, Panstruga R, Kogel KH, Keller H, Coustau C.	Genes (Basel)	10.3390/genes10100740	2019
Metabolism	A novel bacterial sulfur oxidation pathway provides a new link between the cycles of organic and inorganic sulfur compounds.	Koch T, Dahl C.	ISME J	10.1038/s41396-018-0209-7	2018
Genetics	Osmotic Adaptation and Compatible Solute Biosynthesis of Phototrophic Bacteria as Revealed from Genome Analyses.	Imhoff JF, Rahn T, Kunzel S, Keller A, Neulinger SC.	Microorganisms	10.3390/microorganisms9010046	2020
Enzymology	Nature's nitrite-to-ammonia expressway, with no stop at dinitrogen.	Kroneck PMH.	J Biol Inorg Chem	10.1007/s00775-021-01921-4	2022
Metabolism	Metatranscriptomic evidence of pervasive and diverse chemolithoautotrophy relevant to C, S, N and Fe cycling in a shallow alluvial aquifer.	Jewell TN, Karaoz U, Brodie EL, Williams KH, Beller HR.	ISME J	10.1038/ismej.2016.25	2016
Metabolism	Mechanisms of Mineral Substrate Acquisition in a Thermoacidophile.	Amenabar MJ, Boyd ES.	Appl Environ Microbiol	10.1128/aem.00334-18	2018
	Linking DNRA community structure and activity in a shallow lagoonal estuarine system.	Song B, Lisa JA, Tobias CR.	Front Microbiol	10.3389/fmicb.2014.00460	2014
Enzymology	Bacterial CS2 hydrolases from Acidithiobacillus thiooxidans strains are homologous to the archaeal catenane CS2 hydrolase.	Smeulders MJ, Pol A, Venselaar H, Barends TR, Hermans J, Jetten MS, Op den Camp HJ.	J Bacteriol	10.1128/jb.00627-13	2013
Enzymology	Phylogenetic and environmental diversity of DsrAB-type dissimilatory (bi)sulfite reductases.	Muller AL, Kjeldsen KU, Rattei T, Pester M, Loy A.	ISME J	10.1038/ismej.2014.208	2015
	Noncanonical Amino Acids in Biocatalysis.	Birch-Price Z, Hardy FJ, Lister TM, Kohn AR, Green AP.	Chem Rev	10.1021/acs.chemrev.4c00120	2024
	Cytochromes c in Archaea: distribution, maturation, cell architecture, and the special case of Ignicoccus hospitalis.	Kletzin A, Heimerl T, Flechsler J, van Niftrik L, Rachel R, Klingl A.	Front Microbiol	10.3389/fmicb.2015.00439	2015
Genetics	Comparison of environmental and isolate Sulfobacillus genomes reveals diverse carbon, sulfur, nitrogen, and hydrogen metabolisms.	Justice NB, Norman A, Brown CT, Singh A, Thomas BC, Banfield JF.	BMC Genomics	10.1186/1471-2164-15-1107	2014
Enzymology	Microbial diversity in ultra-high-pressure rocks and fluids from the Chinese Continental Scientific Drilling Project in China.	Zhang G, Dong H, Xu Z, Zhao D, Zhang C.	Appl Environ Microbiol	10.1128/aem.71.6.3213-3227.2005	2005
Enzymology	Isolation and characterization of nitrate reductase from the halophilic sulfur-oxidizing bacterium Thioalkalivibrio nitratireducens.	Filimonenkov AA, Zvyagilskaya RA, Tikhonova TV, Popov VO	Biochemistry (Mosc)	10.1134/s000629791006009x	2010
Enzymology	Molecular and catalytic properties of a novel cytochrome c nitrite reductase from nitrate-reducing haloalkaliphilic sulfur-oxidizing bacterium Thioalkalivibrio nitratireducens.	Tikhonova TV, Slutsky A, Antipov AN, Boyko KM, Polyakov KM, Sorokin DY, Zvyagilskaya RA, Popov VO	Biochim Biophys Acta	10.1016/j.bbapap.2005.12.021	2006
Enzymology	New enzyme belonging to the family of molybdenum-free nitrate reductases.	Antipov AN, Sorokin DY, L'Vov NP, Kuenen JG	Biochem J	10.1042/BJ20021193	2003
Phylogeny	Thialkalivibrio nitratireducens sp. nov., a nitrate-reducing member of an autotrophic denitrifying consortium from a soda lake.	Sorokin DY, Tourova TP, Sjollema KA, Kuenen JG	Int J Syst Evol Microbiol	10.1099/ijs.0.02615-0	2003

References

#5541	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14787
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thioalkalivibrio nitratireducens (DSM 14787, UNIQEM 213, ALEN 2)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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