Name: Pusillimonas noertemannii BN9
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 362

Type strain:

Species: Pusillimonas noertemannii

Strain Designation: BN9

Culture col. no.: DSM 10065, CCUG 51657, NCIMB 14020, CIP 108767

Strain history: CIP <- 2005, P. Kämpfer, Giessen Univ., Giessen, Germany <- R. Rub <- B. Nörtemann: strain BN9

NCBI tax ID(s): 305977 (species)

SI-ID 48741

DSM 10065, NCIMB 14020, CCUG 51247, CCUG 51657, CIP 108767

Special Collections

Section

Pusillimonas noertemannii BN9 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from water of river Elbe.

colony-forming
Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Alcaligenaceae*
	Genus	*Pusillimonas*
	Species	**Pusillimonas noertemannii**
	Full Scientific Name (LPSN)	Pusillimonas noertemannii Stolz et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #23276]	Gram stain	negative
[Ref.: #121324]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %94.828

[Ref.: #23276]	Cell length	1-1.5 µm

[Ref.: #23276]	Cell width	0.5-0.8 µm

[Ref.: #23276]	Cell shape	rod-shaped
[Ref.: #121324]	Cell shape	rod-shaped

[Ref.: #23276]	Motility	yes
[Ref.: #121324]	Motility	yes

[Ref.: #23276]	Flagellum arrangement	monotrichous, polar

[Ref.: #23276]	Colony color	brownish
[Ref.: #23276]	Colony shape	circular
[Ref.: #23276]	Cultivation medium used	nutrient agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3791]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #3791]

Culture medium growth

[Ref.: #3791]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3791]

Culture medium composition

expand / minimize

[Ref.: #3791]

Culture medium

PLATE COUNT AGAR (DSMZ Medium 464)

[Ref.: #3791]

Culture medium growth

[Ref.: #3791]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3791]

Culture medium composition

expand / minimize

[Ref.: #3791]

Culture medium

MINERAL MEDIUM PH 7.25 (DSMZ Medium 465)

[Ref.: #3791]

Culture medium growth

[Ref.: #3791]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3791]

Culture medium composition

expand / minimize

[Ref.: #23276]

Culture medium

Nutrient agar (NA)

[Ref.: #23276]

Culture medium growth

[Ref.: #37643]

Culture medium

MEDIUM 23 - for Afipia and Legionella

[Ref.: #37643]

Culture medium growth

[Ref.: #37643]

Culture medium composition

expand / minimize

[Ref.: #121324]

Culture medium

CIP Medium 23

[Ref.: #121324]

Culture medium growth

[Ref.: #121324]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #3791]		growth	30 °C
[Ref.: #23276]		growth	30 °C
[Ref.: #23276]		growth	37 °C
[Ref.: #23276]		growth	42 °C
[Ref.: #23276]	no	growth	4 °C
[Ref.: #37643]		growth	37 °C
[Ref.: #59271]		growth	30-37 °C
[Ref.: #121324]		growth	15-41 °C
[Ref.: #121324]	no	growth	5 °C
[Ref.: #121324]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #59271]	Oxygen tolerance	aerobe
[Ref.: #121324]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

	Salt	Tested relation		Salt conc.
[Ref.: #121324]	NaCl		growth	0-4	%
[Ref.: #121324]	NaCl	no	growth	6	%
[Ref.: #121324]	NaCl	no	growth	8	%
[Ref.: #121324]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23276]	4-nitrophenyl alpha-D-glucopyranoside ChEBI	-	hydrolysis
[Ref.: #23276]	4-nitrophenyl beta-D-galactopyranoside ChEBI	-	hydrolysis
[Ref.: #23276]	4-nitrophenyl beta-D-glucopyranoside ChEBI	-	hydrolysis
[Ref.: #23276]	4-nitrophenyl beta-D-glucuronide ChEBI	-	hydrolysis
[Ref.: #23276]	4-nitrophenyl beta-D-xylopyranoside ChEBI	-	hydrolysis
[Ref.: #23276]	bis-4-nitrophenyl phosphate ChEBI	-	hydrolysis
[Ref.: #23276]	bis-4-nitrophenyl-phenyl phosphonate ChEBI	-	hydrolysis
[Ref.: #23276]	bis-4-nitrophenyl-phosphorylcholine ChEBI	-	hydrolysis
[Ref.: #121324]	citrate ChEBI	-	carbon source
[Ref.: #121324]	esculin ChEBI	-	hydrolysis
[Ref.: #23276]	gamma-L-glutamate-4-nitroanilide	-	hydrolysis
[Ref.: #121324]	hippurate ChEBI	+	hydrolysis
[Ref.: #23276]	L-alanine 4-nitroanilide	+	hydrolysis
[Ref.: #23276]	L-aniline-4-nitroanilide	-	hydrolysis
[Ref.: #23276]	L-proline-4-nitroanilide	-	hydrolysis
[Ref.: #23276]	malate ChEBI	-	carbon source
[Ref.: #121324]	malonate ChEBI	-	assimilation
[Ref.: #121324]	nitrate ChEBI	-	builds gas from
[Ref.: #121324]	nitrate ChEBI	-	reduction
[Ref.: #121324]	nitrate ChEBI	-	respiration
[Ref.: #121324]	nitrite ChEBI	-	builds gas from
[Ref.: #121324]	nitrite ChEBI	-	reduction
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #121324]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #121324]		acetoin ChEBI	-
[Ref.: #121324]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #121324]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #121324]	amylase	-
[Ref.: #121324]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #121324]	caseinase	-	3.4.21.50
[Ref.: #121324]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23276]	cytochrome oxidase	+	1.9.3.1
[Ref.: #121324]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #121324]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #121324]	gelatinase	-
[Ref.: #121324]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #121324]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #121324]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121324]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #121324]	oxidase	+
[Ref.: #121324]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #121324]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #121324]	tryptophan deaminase	-
[Ref.: #121324]	tween esterase	-
[Ref.: #121324]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #121324]	2901	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121324]	11441	-	-	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	taurine degradation	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	gallate degradation	100	5 of 5
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	resorcinol degradation	100	2 of 2
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	3-phenylpropionate degradation	93.33	14 of 15
[Ref.: #66794]	4-hydroxyphenylacetate degradation	90	9 of 10
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	4-hydroxymandelate degradation	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	gluconeogenesis	87.5	7 of 8
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	ubiquinone biosynthesis	85.71	6 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	tryptophan metabolism	84.21	32 of 38
[Ref.: #66794]	glutamate and glutamine metabolism	82.14	23 of 28
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	vitamin K metabolism	80	4 of 5
[Ref.: #66794]	phenol degradation	80	16 of 20
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	allantoin degradation	77.78	7 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	NAD metabolism	77.78	14 of 18
[Ref.: #66794]	methionine metabolism	76.92	20 of 26
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	purine metabolism	73.4	69 of 94
[Ref.: #66794]	vitamin B6 metabolism	72.73	8 of 11
[Ref.: #66794]	cysteine metabolism	72.22	13 of 18
[Ref.: #66794]	glutathione metabolism	71.43	10 of 14
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	tyrosine metabolism	71.43	10 of 14
[Ref.: #66794]	alanine metabolism	68.97	20 of 29
[Ref.: #66794]	lipid metabolism	67.74	21 of 31
[Ref.: #66794]	selenocysteine biosynthesis	66.67	4 of 6
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	flavin biosynthesis	66.67	10 of 15
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	CO2 fixation in Crenarchaeota	66.67	6 of 9
[Ref.: #66794]	methane metabolism	66.67	2 of 3
[Ref.: #66794]	non-pathway related	65.79	25 of 38
[Ref.: #66794]	histidine metabolism	65.52	19 of 29
[Ref.: #66794]	tetrahydrofolate metabolism	64.29	9 of 14
[Ref.: #66794]	pentose phosphate pathway	63.64	7 of 11
[Ref.: #66794]	proline metabolism	63.64	7 of 11
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	androgen and estrogen metabolism	62.5	10 of 16
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	sulfate reduction	61.54	8 of 13
[Ref.: #66794]	lipoate biosynthesis	60	3 of 5
[Ref.: #66794]	Entner Doudoroff pathway	60	6 of 10
[Ref.: #66794]	hydrogen production	60	3 of 5
[Ref.: #66794]	propionate fermentation	60	6 of 10
[Ref.: #66794]	pyrimidine metabolism	57.78	26 of 45
[Ref.: #66794]	isoprenoid biosynthesis	57.69	15 of 26
[Ref.: #66794]	oxidative phosphorylation	57.14	52 of 91
[Ref.: #66794]	lysine metabolism	57.14	24 of 42
[Ref.: #66794]	degradation of sugar alcohols	56.25	9 of 16
[Ref.: #66794]	d-mannose degradation	55.56	5 of 9
[Ref.: #66794]	arginine metabolism	54.17	13 of 24
[Ref.: #66794]	glycolysis	52.94	9 of 17
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	52.94	9 of 17
[Ref.: #66794]	carnitine metabolism	50	4 of 8
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	degradation of hexoses	44.44	8 of 18
[Ref.: #66794]	degradation of sugar acids	44	11 of 25
[Ref.: #66794]	polyamine pathway	43.48	10 of 23
[Ref.: #66794]	benzoyl-CoA degradation	42.86	3 of 7
[Ref.: #66794]	degradation of pentoses	42.86	12 of 28
[Ref.: #66794]	carotenoid biosynthesis	40.91	9 of 22
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	factor 420 biosynthesis	40	2 of 5
[Ref.: #66794]	glycogen metabolism	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	cellulose degradation	40	2 of 5
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	urea cycle	38.46	5 of 13
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	d-xylose degradation	36.36	4 of 11
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	33.33	2 of 6
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	myo-inositol biosynthesis	30	3 of 10
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	ascorbate metabolism	27.27	6 of 22
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
[Ref.: #66794]	daunorubicin biosynthesis	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3791]	Sample type/isolated from	water of river Elbe
[Ref.: #3791]	Geographic location (country and/or sea, region)	river Elbe
[Ref.: #3791]	Country	Germany
[Ref.: #3791]	Country ISO 3 Code	DEU
[Ref.: #3791]	Continent	Europe

[Ref.: #23276]	Sample type/isolated from	River Elbe in Germany after enrichment of a mixed bacterial culture with 6-aminonaphthalene-2-sulphonate

[Ref.: #59271]	Sample type/isolated from	Water
[Ref.: #59271]	Geographic location (country and/or sea, region)	River Elbe
[Ref.: #59271]	Country	Germany
[Ref.: #59271]	Country ISO 3 Code	DEU
[Ref.: #59271]	Continent	Europe

[Ref.: #121324]	Sample type/isolated from	Environment, Water, Elbe river
[Ref.: #121324]	Country	Germany
[Ref.: #121324]	Country ISO 3 Code	DEU
[Ref.: #121324]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Laboratory	#Lab enrichment
#Engineered	#Laboratory	#Simulated communities
#Environmental	#Aquatic	#River (Creek)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY695828 (>99% sequence identity) for Pusillimonas from Microbeatlas

Aquatic Samples	172
Soil Samples	207
Animal Samples	135
Plant Samples	16
Total Samples	530

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3791]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #121324]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23276]	Pusillimonas noertemannii 16S ribosomal RNA gene, complete sequence	AY695828	1525	GenBank ENA	305977 tax ID
[Ref.: #20218]	Proteobacteria 16S rRNA (BN9)	X59160	158	GenBank ENA	2722 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pusillimonas noertemannii DSM 10065	GCA_003545825	contig	GenBank ENA	305977 tax ID	*
[Ref.: #66792]	Pusillimonas noertemannii DSM 10065	GCA_013416295	contig	GenBank ENA	305977 tax ID	*
[Ref.: #66792]	Pusillimonas noertemannii DSM 10065	GCA_003096595	scaffold	GenBank ENA	305977 tax ID	*
[Ref.: #66792]	Pusillimonas noertemannii strain DSM 10065	305977.4	wgs	PATRIC	305977 tax ID	*
[Ref.: #66792]	Pusillimonas noertemannii strain DSM 10065	305977.8	wgs	PATRIC	305977 tax ID	*
[Ref.: #66792]	Pusillimonas noertemannii strain DSM 10065	305977.3	wgs	PATRIC	305977 tax ID	*

[Ref.: #23276]

GC-content

61.8 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pusillimonas noertemannii strain DSM 10065 PATRIC: 305977.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pusillimonas noertemannii DSM 10065 NCBI: GCA_003096595.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	94.828	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.221	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	84.066	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	78.451	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.181	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	86.26	yes

Availability in culture collections External links

[Ref.: #3791]

Culture collection no.

DSM 10065, CCUG 51657, NCIMB 14020, CIP 108767

[Ref.: #70042]

SI-ID 48741

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pusillimonas noertemannii gen. nov., sp. nov., a new member of the family Alcaligenaceae that degrades substituted salicylates.	Stolz A, Burger S, Kuhm A, Kampfer P, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.63466-0	2005	*

References

#3791

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10065

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23276

Andreas Stolz, Sibylle Bürger, Andrea Kuhm, Peter Kämpfer, Hans-Jürgen Busse: Pusillimonas noertemannii gen. nov., sp. nov., a new member of the family Alcaligenaceae that degrades substituted salicylates. IJSEM 55: 1077 - 1081 2005 ( DOI 10.1099/ijs.0.63466-0 , PubMed 15879236 )

#37643 ; Curators of the CIP;
#59271 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 51657

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70042

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48741.1 )

#121324 Collection of Institut Pasteur ; Curators of the CIP; CIP 108767
* These data were automatically processed and therefore are not curated

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Pusillimonas noertemannii strain DSM 10065

Pusillimonas noertemannii DSM 10065

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