Corynebacterium tuberculostearicum (DSM 44923, CCUG 47258, 911929/02)*

Name: Corynebacterium tuberculostearicum (DSM 44923, CCUG 47258, 911*929/02)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3222

Type strain

Strain Designation 911*929/02

Culture col. no. DSM 44923 CCUG 47258 911*929/02

NCBI tax ID(s) 38304

Special Collections DSMZ CCUG

History DSMZ <- E. Falsen, CCUG <- Blood Dept., PHL Göteborg

Links

Corynebacterium tuberculostearicum 911Corynebacterium tuberculostearicum929/02 is a microaerophile bacterium that was isolated from human mitralis valve of a 54-year-old man.

microaerophile genome sequence Bacteria

Name and taxonomic classification

SI-ID 110973

CCUG 47258,DSM 44923

@ref 20215

Last LPSN update 2026-05-29 08:25:39

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium tuberculostearicum

Full scientific name Corynebacterium tuberculostearicum Feurer et al. 2004

Synonyms (1)

"Corynebacterium tuberculostearicum"

BacDive ID	Other strains from **Corynebacterium tuberculostearicum** (42)	Type strain
3221	C. tuberculostearicum LDC-20, DSM 44922, ATCC 35529, ATCC 35692, ... (type strain)
3217	C. tuberculostearicum 5621/02/B, DSM 44694
3218	C. tuberculostearicum 5621/02/A, DSM 44695
3219	C. tuberculostearicum 5615/02/B, DSM 44696
3220	C. tuberculostearicum 8241rör1, 96100004/99, 96200016/99, DSM ...
135850	C. tuberculostearicum CIP 102076
135856	C. tuberculostearicum 154-86, CIP 102211
137634	C. tuberculostearicum 576.86, CIP 102590
137725	C. tuberculostearicum 148A, CIP 106714, ATCC 33035, CCUG 28787, ...
137773	C. tuberculostearicum 619.85, CIP 101775
137892	C. tuberculostearicum 45-86, CIP 102124
137974	C. tuberculostearicum 313-86, CIP 102346
138055	C. tuberculostearicum 610-86, CIP 102622
138066	C. tuberculostearicum 627-86, CIP 102645
138756	C. tuberculostearicum 118.87, CIP 102857
143330	C. tuberculostearicum CCUG 18436
143331	C. tuberculostearicum CCUG 18437
146516	C. tuberculostearicum CCUG 31362
148069	C. tuberculostearicum CCUG 34765
149050	C. tuberculostearicum CCUG 36785
149072	C. tuberculostearicum CCUG 36821
149237	C. tuberculostearicum CCUG 37318
149295	C. tuberculostearicum CCUG 37434
149557	C. tuberculostearicum CCUG 37954
150966	C. tuberculostearicum CCUG 42891
151155	C. tuberculostearicum CCUG 43381
151198	C. tuberculostearicum CCUG 43451
153174	C. tuberculostearicum CCUG 48645
153364	C. tuberculostearicum CCUG 49343
153821	C. tuberculostearicum CCUG 51274
153834	C. tuberculostearicum CCUG 51314
155012	C. tuberculostearicum CCUG 56083
155126	C. tuberculostearicum CCUG 56539
155184	C. tuberculostearicum CCUG 56839
155288	C. tuberculostearicum CCUG 57214
155341	C. tuberculostearicum CCUG 57383
155584	C. tuberculostearicum CCUG 58242
156198	C. tuberculostearicum CCUG 60692
156251	C. tuberculostearicum CCUG 60869
156296	C. tuberculostearicum CCUG 61088 B
158059	C. tuberculostearicum Turin130318_T2, DSM 107261
174269	C. tuberculostearicum CIMB 05-1840, CRBIP17.57

Morphology

Cell morphology

@ref	Confidence	Gram stain
125438	95
125438	90.48	positive
125439	91.164

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
12196	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
12196	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
12196	positive	growth	37
57608	positive	growth	37

Physiology and metabolism

Oxygen tolerance

57608

Oxygen tolerancemicroaerophile

Spore formation

@ref	Spore formation	Confidence
125439		94.626

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68381	17306 ChEBI	maltose	-	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	-	builds acid from	from API rID32STR
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68381	15688 ChEBI	acetoin	-		from API rID32STR
68380	35581 ChEBI	indole		-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68381	alpha-galactosidase	-	3.2.1.22	from API rID32STR
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68382	beta-galactosidase	-	3.2.1.23	from API zym
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68381	beta-glucosidase	-	3.2.1.21	from API rID32STR
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
68379	catalase	+	1.11.1.6	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	-		from API Coryne
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	+		from API rID32A
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68382	leucine arylamidase	-	3.4.11.1	from API zym
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68380	phenylalanine arylamidase	+		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68381	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32STR
68380	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32A
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68380	serine arylamidase	-		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A
68379	urease	-	3.5.1.5	from API Coryne
68381	urease	-	3.5.1.5	from API rID32STR
68382	valine arylamidase	-		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
57608	-	-	+	+	-	-	-	-	-	-	-	-	+	+	-	-	+	-	+	-	+

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
57608	-	+	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
57608	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	+	+	-	+	-	+	-	+	+	-	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
57608	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Male
#Host Body-Site	#Organ	#Heart

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
12196	human mitralis valve of a 54-year-old man	Homo sapiens		GÖTEBORG	Sweden	SWE	Europe
57608	Human mitralis valve,54-yr-old man	Homo sapiens	2002-12-01	Göteborg	Sweden	SWE	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12196	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM1689426v1 assembly for Corynebacterium tuberculostearicum FDAARGOS_1198	chromosome	GCA_016894265	38304.10	38304	84.32

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1689426v1 assembly for Corynebacterium tuberculostearicum FDAARGOS_1198
NCBI: GCA_016894265

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	70.81	no
125439	gram_stain	BacteriaNetⓘ	positive	64.03	no
125439	motility	BacteriaNetⓘ	no	91.16	no
125439	spore_formation	BacteriaNetⓘ	no	94.63	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium tuberculostearicum strain FDAARGOS_1198 strain Not applicable
PATRIC: 38304.10

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.48	no
125438	anaerobic	anaerobicⓘ	no	94.92	yes
125438	spore-forming	spore-formingⓘ	no	83.93	no
125438	aerobic	aerobicⓘ	no	59.17	yes
125438	thermophilic	thermophileⓘ	no	94.58	yes
125438	flagellated	motile2+ⓘ	no	95.00	no

Literature

References

#12196	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44923
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#57608	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 47258
#68379	Automatically annotated from API Coryne .
#68380	Automatically annotated from API rID32A .
#68381	Automatically annotated from API rID32STR .
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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