Name: Corynebacterium marinum 7015
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 3223

Type strain:

Species: Corynebacterium marinum

Strain Designation: 7015, D7015

Culture col. no.: DSM 44953, CGMCC 1.6998, NRRL B-24779, JCM 17491, CIP 110199

Strain history: CIP <- 2010, NRRL

NCBI tax ID(s): 1224162 (strain), 349751 (species)

SI-ID 370387

CGMCC 1.6998, NRRL B-24779, DSM 44953, JCM 17491, CIP 110199

Section

Corynebacterium marinum 7015 is a facultative anaerobe, mesophilic, Gram-positive bacterium that was isolated from coastal sediment close to a coal-fired power station.

Gram-positive
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Corynebacteriaceae*
	Genus	*Corynebacterium*
	Species	**Corynebacterium marinum**
	Full Scientific Name (LPSN)	Corynebacterium marinum Du et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #23203]	Gram stain	positive
[Ref.: #120810]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #23203]	Cell shape	rod-shaped
[Ref.: #120810]	Cell shape	oval-shaped

[Ref.: #23203]	Motility	no
[Ref.: #120810]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %96.856

[Ref.: #23203]	Colony size	0.5-1.5 mm
[Ref.: #23203]	Colony color	yellow
[Ref.: #23203]	Colony shape	circular
[Ref.: #23203]	Incubation period	2 days
[Ref.: #23203]	Cultivation medium used	MA medium

[Ref.: #69368]	Colony color	Golden yellow (1004)
[Ref.: #69368]	Cultivation medium used	ISP 2

[Ref.: #69368]	Colony color	Golden yellow (1004)
[Ref.: #69368]	Cultivation medium used	ISP 6

[Ref.: #69368]	Colony color	Light ivory (1015)
[Ref.: #69368]	Cultivation medium used	ISP 7

[Ref.: #69368]	Colony color	Light ivory (1015), golden yellow (1004)
[Ref.: #69368]	Cultivation medium used	suter with tyrosine

[Ref.: #69368]	Colony color	Light ivory (1015), golden yellow (1004)
[Ref.: #69368]	Cultivation medium used	suter without tyrosine

[Ref.: #69368]	Colony color	Oyster white (1013)
[Ref.: #69368]	Cultivation medium used	ISP 3

[Ref.: #69368]	Colony color	Oyster white (1013)
[Ref.: #69368]	Cultivation medium used	ISP 4

[Ref.: #69368]	Colony color	Oyster white (1013)
[Ref.: #69368]	Cultivation medium used	ISP 5

[Ref.: #69368]	Pigment production	no
[Ref.: #69368]	Pigment name	Melanin
[Ref.: #69368]	Pigment production	no
[Ref.: #69368]	Pigment name	soluble pigment

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	ISP 2

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	ISP 3

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	ISP 4

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	ISP 5

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	ISP 6

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	ISP 7

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69368]	Multicellular complex forming ability	no
[Ref.: #69368]	Multicellular complex name	Aerial mycelium
[Ref.: #69368]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #69368]

Caption:

Plates (535, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69368]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

[Ref.: #69368]

Caption:

Plates (535, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69368]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12206]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #12206]

Culture medium growth

[Ref.: #12206]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12206]

Culture medium composition

expand / minimize

[Ref.: #12206]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #12206]

Culture medium growth

[Ref.: #12206]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12206]

Culture medium composition

expand / minimize

[Ref.: #23203]

Culture medium

MA medium

[Ref.: #23203]

Culture medium growth

[Ref.: #34716]

Culture medium

Marine agar (MA)

[Ref.: #34716]

Culture medium growth

[Ref.: #34716]

Culture medium composition

expand / minimize

[Ref.: #120810]

Culture medium

CIP Medium 13

[Ref.: #120810]

Culture medium growth

[Ref.: #120810]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #12206]	growth	28 °C
[Ref.: #23203]	growth	4-37 °C
[Ref.: #23203]	optimum	30-32 °C
[Ref.: #34716]	growth	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #12206]	Temperature range	mesophilic
[Ref.: #23203]	Temperature range	mesophilic
[Ref.: #34716]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23203]	Oxygen tolerance	facultative anaerobe
[Ref.: #120810]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.997

	Salt		Salt conc.
[Ref.: #23203]	NaCl	growth	0-8	%(w/v)
[Ref.: #23203]	NaCl	optimum	1	%(w/v)
[Ref.: #69368]	NaCl	growth	0-5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69368]	arabinose ChEBI	-	growth
[Ref.: #23203]	casein	+	other
[Ref.: #69368]	cellulose ChEBI	-	growth
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #23203]	esculin ChEBI	-	hydrolysis
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69368]	fructose ChEBI	+	growth
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #23203]	glucose ChEBI	-	fermentation
[Ref.: #23203]	glucose ChEBI	+	builds acid from
[Ref.: #69368]	glucose ChEBI	+	growth
[Ref.: #23203]	glycogen ChEBI	+	builds acid from
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69368]	inositol ChEBI	-	growth
[Ref.: #23203]	lactose ChEBI	-	builds acid from
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #23203]	maltose ChEBI	+	builds acid from
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #23203]	mannitol ChEBI	-	builds acid from
[Ref.: #69368]	mannose ChEBI	-	growth
[Ref.: #120810]	nitrate ChEBI	+	reduction
[Ref.: #68379]	nitrate ChEBI	+	reduction	* from API Coryne
[Ref.: #23203]	nitrite ChEBI	+	reduction
[Ref.: #120810]	nitrite ChEBI	-	reduction
[Ref.: #23203]	pullulan ChEBI	+	hydrolysis
[Ref.: #69368]	raffinose ChEBI	-	growth
[Ref.: #69368]	rhamnose ChEBI	-	growth
[Ref.: #23203]	ribose ChEBI	-	builds acid from
[Ref.: #23203]	starch ChEBI	+	hydrolysis
[Ref.: #23203]	sucrose ChEBI	+	builds acid from
[Ref.: #69368]	sucrose ChEBI	-	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #23203]	tween 20 ChEBI	+	hydrolysis
[Ref.: #23203]	tween 40 ChEBI	+	hydrolysis
[Ref.: #23203]	tween 60 ChEBI	+	hydrolysis
[Ref.: #23203]	tween 80 ChEBI	+	hydrolysis
[Ref.: #23203]	urea ChEBI	-	hydrolysis
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #23203]	xylose ChEBI	-	builds acid from
[Ref.: #69368]	xylose ChEBI	-	growth
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #23203]	ampicillin ChEBI	yes	25	µg (disc)
[Ref.: #23203]	carbenicillin ChEBI	yes	100	µg (disc)
[Ref.: #23203]	chloramphenicol ChEBI	yes	50	µg (disc)
[Ref.: #23203]	co-trimoxazole ChEBI				yes	25	µg (disc)
[Ref.: #23203]	gentamicin ChEBI	yes	10	µg (disc)
[Ref.: #23203]	kanamycin ChEBI	yes	30	µg (disc)
[Ref.: #23203]	nalidixic acid ChEBI				yes	30	µg (disc)
[Ref.: #23203]	nitrofurantoin ChEBI				yes	50	µg (disc)
[Ref.: #23203]	streptomycin ChEBI	yes	25	µg (disc)
[Ref.: #23203]	sulfamethizole ChEBI				yes	200	µg (disc)
[Ref.: #23203]	tetracycline ChEBI				yes	100	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #23203]		acetoin ChEBI	yes
[Ref.: #120810]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #23203]		acetoin ChEBI	+
[Ref.: #23203]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #23203]	acid phosphatase	-	3.1.3.2
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #23203]	alkaline phosphatase	-	3.1.3.1
[Ref.: #68379]	alkaline phosphatase	-	3.1.3.1	* from API Coryne
[Ref.: #23203]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #23203]	alpha-fucosidase	-	3.2.1.51
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #23203]	alpha-galactosidase	-	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #23203]	alpha-glucosidase	-	3.2.1.20
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym, API Coryne
[Ref.: #23203]	alpha-mannosidase	-	3.2.1.24
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #23203]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym, API Coryne
[Ref.: #23203]	beta-glucosidase	-	3.2.1.21
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68379]	beta-glucosidase	-	3.2.1.21	* from API Coryne
[Ref.: #23203]	beta-glucuronidase	+	3.2.1.31
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym, API Coryne
[Ref.: #23203]	catalase	+	1.11.1.6
[Ref.: #120810]	catalase	+	1.11.1.6
[Ref.: #23203]	cystine arylamidase	-	3.4.11.3
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23203]	cytochrome oxidase	-	1.9.3.1
[Ref.: #23203]	esterase lipase (C 8)	+
[Ref.: #23203]	esterase lipase (C 8)	-
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #23203]	leucine arylamidase	+	3.4.11.1
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #23203]	lipase (C 14)	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #23203]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #23203]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #120810]	oxidase	-
[Ref.: #23203]	pyrazinamidase	+	3.5.1.B15
[Ref.: #68379]	pyrazinamidase	+	3.5.1.B15	* from API Coryne
[Ref.: #23203]	pyrrolidonyl arylamidase	-	3.4.19.3
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #23203]	trypsin	-	3.4.21.4
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120810]	urease	-	3.5.1.5
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #23203]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69368]	3861	+	+	-	-	+	-	-	-	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69368]	6045	not determinedn.d.	-	+/-	+/-	-	+	+/-	-	-	-	-	+/-	-	-	+	-	+	-	-	-
[Ref.: #120810]	12433	-	+	+	+	-	+	-	-	-	-	-	+	-	-	+	-	+	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	glycogen biosynthesis	100	4 of 4
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	glycolate and glyoxylate degradation	100	6 of 6
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	citric acid cycle	85.71	12 of 14
[Ref.: #66794]	propanol degradation	85.71	6 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	metabolism of disaccharids	81.82	9 of 11
[Ref.: #66794]	pentose phosphate pathway	81.82	9 of 11
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	lipoate biosynthesis	80	4 of 5
[Ref.: #66794]	vitamin K metabolism	80	4 of 5
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	purine metabolism	79.79	75 of 94
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	glutamate and glutamine metabolism	78.57	22 of 28
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	palmitate biosynthesis	77.27	17 of 22
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	gluconeogenesis	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	pyrimidine metabolism	73.33	33 of 45
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	NAD metabolism	72.22	13 of 18
[Ref.: #66794]	tetrahydrofolate metabolism	71.43	10 of 14
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	leucine metabolism	69.23	9 of 13
[Ref.: #66794]	isoprenoid biosynthesis	69.23	18 of 26
[Ref.: #66794]	oxidative phosphorylation	67.03	61 of 91
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	d-mannose degradation	66.67	6 of 9
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	4-hydroxymandelate degradation	66.67	6 of 9
[Ref.: #66794]	degradation of sugar alcohols	62.5	10 of 16
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	alanine metabolism	62.07	18 of 29
[Ref.: #66794]	lipid metabolism	61.29	19 of 31
[Ref.: #66794]	3-chlorocatechol degradation	60	3 of 5
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	tryptophan metabolism	57.89	22 of 38
[Ref.: #66794]	non-pathway related	57.89	22 of 38
[Ref.: #66794]	methionine metabolism	57.69	15 of 26
[Ref.: #66794]	lysine metabolism	57.14	24 of 42
[Ref.: #66794]	cysteine metabolism	55.56	10 of 18
[Ref.: #66794]	d-xylose degradation	54.55	6 of 11
[Ref.: #66794]	arginine metabolism	54.17	13 of 24
[Ref.: #66794]	sulfate reduction	53.85	7 of 13
[Ref.: #66794]	urea cycle	53.85	7 of 13
[Ref.: #66794]	3-phenylpropionate degradation	53.33	8 of 15
[Ref.: #66794]	histidine metabolism	51.72	15 of 29
[Ref.: #66794]	CMP-KDO biosynthesis	50	2 of 4
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	Entner Doudoroff pathway	50	5 of 10
[Ref.: #66794]	vitamin E metabolism	50	2 of 4
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glutathione metabolism	50	7 of 14
[Ref.: #66794]	cis-vaccenate biosynthesis	50	1 of 2
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	vitamin B6 metabolism	45.45	5 of 11
[Ref.: #66794]	phenol degradation	45	9 of 20
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	lipid A biosynthesis	44.44	4 of 9
[Ref.: #66794]	degradation of sugar acids	44	11 of 25
[Ref.: #66794]	tyrosine metabolism	42.86	6 of 14
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	40	2 of 5
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	36.36	4 of 11
[Ref.: #66794]	carotenoid biosynthesis	36.36	8 of 22
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	degradation of pentoses	32.14	9 of 28
[Ref.: #66794]	ascorbate metabolism	31.82	7 of 22
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	degradation of hexoses	27.78	5 of 18
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	methanogenesis from CO2	25	3 of 12
[Ref.: #66794]	biotin biosynthesis	25	1 of 4
[Ref.: #66794]	arachidonic acid metabolism	22.22	4 of 18
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12206]	Sample type/isolated from	coastal sediment close to a coal-fired power station
[Ref.: #12206]	Geographic location (country and/or sea, region)	Qingdao
[Ref.: #12206]	Country	China
[Ref.: #12206]	Country ISO 3 Code	CHN
[Ref.: #12206]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Coastal sediment close to a coal-fired power station
[Ref.: #67770]	Geographic location (country and/or sea, region)	Qingdao
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #120810]	Sample type/isolated from	Environment, Coastal sediment
[Ref.: #120810]	Geographic location (country and/or sea, region)	Quingdao
[Ref.: #120810]	Country	China
[Ref.: #120810]	Country ISO 3 Code	CHN
[Ref.: #120810]	Continent	Asia
[Ref.: #120810]	Isolation date	2000
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ219354 (>99% sequence identity) for Corynebacterium marinum subclade from Microbeatlas

Aquatic Samples	2122
Soil Samples	2357
Animal Samples	8968
Plant Samples	676
Total Samples	14123

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12206]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120810]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #12206]	Corynebacterium marinum DSM 44953 16S ribosomal RNA gene, partial sequence	DQ219354	1444	ENA	1224162 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Corynebacterium marinum DSM 44953	GCA_000835165	complete	GenBank	1224162 tax ID	*
[Ref.: #66792]	Corynebacterium marinum CGMCC 1.6998	GCA_014645275	contig	GenBank	349751 tax ID	*
[Ref.: #66792]	Corynebacterium marinum DSM 44953	1224162.11	plasmid	PATRIC	1224162 tax ID	*
[Ref.: #66792]	Corynebacterium marinum DSM 44953	1224162.3	complete	PATRIC	1224162 tax ID	*
[Ref.: #66792]	Corynebacterium marinum DSM 44953	1224162.12	plasmid	PATRIC	1224162 tax ID	*
[Ref.: #66792]	Corynebacterium marinum strain CGMCC 1.6998	349751.5	wgs	PATRIC	349751 tax ID	*

[Ref.: #12206]	GC-content	65.0 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	65 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	67.8 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Corynebacterium marinum DSM 44953 DSM 44953 NCBI: GCA_000835165.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Corynebacterium marinum DSM 44953 DSM 44953 NCBI: GCA_000835165.1
[Ref.: #69480]	motile	no	94.062	yes
[Ref.: #69480]	flagellated	no	98.009	no
[Ref.: #69480]	gram-positive	yes	94.083	yes
[Ref.: #69480]	anaerobic	no	99.328	yes
[Ref.: #69480]	aerobic	yes	71.975	yes
[Ref.: #69480]	halophile	yes	86.197	no
[Ref.: #69480]	spore-forming	no	91.097	no
[Ref.: #69480]	glucose-util	yes	88.223	yes
[Ref.: #69480]	thermophile	no	98.987	no
[Ref.: #69480]	glucose-ferment	no	53.366	yes

Availability in culture collections External links

[Ref.: #12206]

Culture collection no.

DSM 44953, CGMCC 1.6998, NRRL B-24779, JCM 17491, CIP 110199

[Ref.: #72737]

SI-ID 370387

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Corynebacterium alimapuense sp. nov., an obligate marine actinomycete isolated from sediment of Valparaiso bay, Chile.	Claverias F, Gonzales-Siles L, Salva-Serra F, Inganas E, Molin K, Cumsille A, Undabarrena A, Couve E, Moore ERB, Tindall BJ, Gomila M, Camara B	Int J Syst Evol Microbiol	10.1099/ijsem.0.003237	2019	*
Phylogeny	Corynebacterium marinum sp. nov. isolated from coastal sediment.	Du ZJ, Jordan EM, Rooney AP, Chen GJ, Austin B	Int J Syst Evol Microbiol	10.1099/ijs.0.018523-0	2009	*

References

#12206

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44953

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23203

Zong-Jun Du, Elizabeth M. Jordan, Alejandro P. Rooney, Guan-Jun Chen, Brian Austin: Corynebacterium marinum sp. nov. isolated from coastal sediment. IJSEM 60: 1944 - 1947 2010 ( DOI 10.1099/ijs.0.018523-0 , PubMed 19783605 )

#34716 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69368

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#72737

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID370387.1 )

#120810 Collection of Institut Pasteur ; Curators of the CIP; CIP 110199
* These data were automatically processed and therefore are not curated

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Corynebacterium marinum DSM 44953 DSM 44953

Corynebacterium marinum DSM 44953 DSM 44953

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