Corynebacterium tuberculostearicum LDC-20 is an aerobe, mesophilic, Gram-positive prokaryote that forms circular colonies and was isolated from human bone marrow .
Gram-positive rod-shaped colony-forming aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Corynebacteriaceae |
| Genus Corynebacterium |
| Species Corynebacterium tuberculostearicum |
| Full scientific name Corynebacterium tuberculostearicum Feurer et al. 2004 |
| Synonyms (1) |
| @ref | Colony size | Colony shape | Medium used | |
|---|---|---|---|---|
| 23202 | 1 mm | circular | trypto casein soy agar supplemented with Tween 80 | |
| 123677 |
| @ref: | 12195 |
| multimedia content: | DSM_44922-1.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_44922-1.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 12195 |
| multimedia content: | DSM_44922.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_44922.jpg |
| caption: | Medium 693 37°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 12195 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 23202 | trypto casein soy agar supplemented with Tween 80 | ||||
| 33758 | MEDIUM 355 - for Corynebacterium genitalium | Distilled water make up to (1000.000 ml);Tween 80 (1.000 ml);Trypto casein soy agar (40.000 g) | |||
| 123677 | CIP Medium 355 | Medium recipe at CIP |
| 12195 | Compoundpyrazine carboxylamidase |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 23202 | 16808 ChEBI | 2-dehydro-D-gluconate | + | carbon source | |
| 23202 | 17426 ChEBI | 5-dehydro-D-gluconate | + | builds acid from | |
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | + | hydrolysis | from API rID32STR |
| 68380 | 29016 ChEBI | arginine | + | hydrolysis | from API rID32A |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 23202 | 16947 ChEBI | citrate | - | carbon source | |
| 123677 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | + | builds acid from | from API 50CH acid |
| 23202 | 17634 ChEBI | D-glucose | + | carbon source | |
| 68379 | 17634 ChEBI | D-glucose | - | fermentation | from API Coryne |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 23202 | 16024 ChEBI | D-mannose | + | assimilation | |
| 68380 | 16024 ChEBI | D-mannose | - | fermentation | from API rID32A |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 23202 | 16988 ChEBI | D-ribose | + | carbon source | |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68381 | 16988 ChEBI | D-ribose | - | builds acid from | from API rID32STR |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 23202 | 27689 ChEBI | decanoate | - | carbon source | |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 23202 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68379 | 4853 ChEBI | esculin | - | hydrolysis | from API Coryne |
| 123677 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 23202 | 28757 ChEBI | fructose | + | builds acid from | |
| 23202 | 29806 ChEBI | fumarate | + | carbon source | |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 23202 | 28260 ChEBI | galactose | + | builds acid from | |
| 23202 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 23202 | 24265 ChEBI | gluconate | +/- | builds acid from | |
| 68371 | 24265 ChEBI | gluconate | + | builds acid from | from API 50CH acid |
| 23202 | 17234 ChEBI | glucose | + | builds acid from | |
| 23202 | 33871 ChEBI | glycerate | - | carbon source | |
| 23202 | 17754 ChEBI | glycerol | + | builds acid from | |
| 23202 | 17754 ChEBI | glycerol | + | carbon source | |
| 68371 | 17754 ChEBI | glycerol | + | builds acid from | from API 50CH acid |
| 23202 | 28087 ChEBI | glycogen | - | builds acid from | |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | + | hydrolysis | from API rID32STR |
| 123677 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 23202 | 15443 ChEBI | inulin | - | builds acid from | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 23202 | 29991 ChEBI | L-aspartate | + | carbon source | |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 23202 | 29985 ChEBI | L-glutamate | + | carbon source | |
| 68380 | 29985 ChEBI | L-glutamate | + | degradation | from API rID32A |
| 23202 | 15589 ChEBI | L-malate | + | carbon source | |
| 23202 | 17203 ChEBI | L-proline | + | carbon source | |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 23202 | 17115 ChEBI | L-serine | + | carbon source | |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 23202 | 17716 ChEBI | lactose | - | builds acid from | |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 23202 | 17306 ChEBI | maltose | +/- | builds acid from | |
| 68379 | 17306 ChEBI | maltose | - | fermentation | from API Coryne |
| 68381 | 17306 ChEBI | maltose | - | builds acid from | from API rID32STR |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 23202 | 29864 ChEBI | mannitol | - | builds acid from | |
| 23202 | 37684 ChEBI | mannose | + | builds acid from | |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 23202 | 506227 ChEBI | N-acetylglucosamine | +/- | builds acid from | |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 68380 | 17632 ChEBI | nitrate | - | reduction | from API rID32A |
| 123677 | 17632 ChEBI | nitrate | - | reduction | |
| 123677 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | + | builds acid from | from API 50CH acid | |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68380 | 16634 ChEBI | raffinose | - | fermentation | from API rID32A |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 23202 | 33942 ChEBI | ribose | + | builds acid from | |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 23202 | 30911 ChEBI | sorbitol | - | builds acid from | |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 23202 | 28017 ChEBI | starch | - | builds acid from | |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 23202 | 30031 ChEBI | succinate | + | carbon source | |
| 23202 | 17992 ChEBI | sucrose | + | carbon source | |
| 23202 | 17992 ChEBI | sucrose | +/- | builds acid from | |
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68381 | 17992 ChEBI | sucrose | - | builds acid from | from API rID32STR |
| 23202 | 27082 ChEBI | trehalose | +/- | builds acid from | |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68381 | 27082 ChEBI | trehalose | - | builds acid from | from API rID32STR |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 23202 | 16199 ChEBI | urea | - | hydrolysis | |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68381 | 16199 ChEBI | urea | + | hydrolysis | from API rID32STR |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| 23202 | 18222 ChEBI | xylose | - | builds acid from |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 123677 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 23202 | acid phosphatase | +/- | 3.1.3.2 | |
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68380 | alanine arylamidase | + | 3.4.11.2 | from API rID32A |
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | + | from API rID32STR | |
| 123677 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 23202 | alkaline phosphatase | +/- | 3.1.3.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68379 | alkaline phosphatase | + | 3.1.3.1 | from API Coryne |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68380 | alkaline phosphatase | + | 3.1.3.1 | from API rID32A |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 23202 | alpha-chymotrypsin | - | 3.4.21.1 | |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 23202 | alpha-fucosidase | - | 3.2.1.51 | |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68380 | alpha-fucosidase | - | 3.2.1.51 | from API rID32A |
| 23202 | alpha-galactosidase | - | 3.2.1.22 | |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68380 | alpha-galactosidase | - | 3.2.1.22 | from API rID32A |
| 23202 | alpha-glucosidase | - | 3.2.1.20 | |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68380 | alpha-glucosidase | - | 3.2.1.20 | from API rID32A |
| 68379 | alpha-glucosidase | - | 3.2.1.20 | from API Coryne |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 123677 | amylase | - | ||
| 68381 | arginine dihydrolase | + | 3.5.3.6 | from API rID32STR |
| 68380 | arginine dihydrolase | + | 3.5.3.6 | from API rID32A |
| 23202 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 123677 | beta-galactosidase | - | 3.2.1.23 | |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 68380 | beta-galactosidase | - | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | - | from API rID32A | |
| 23202 | beta-glucosidase | - | 3.2.1.21 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 68380 | beta-glucosidase | - | 3.2.1.21 | from API rID32A |
| 68379 | beta-glucosidase | - | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68380 | beta-glucuronidase | - | 3.2.1.31 | from API rID32A |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 123677 | caseinase | - | 3.4.21.50 | |
| 23202 | catalase | + | 1.11.1.6 | |
| 123677 | catalase | + | 1.11.1.6 | |
| 68379 | catalase | + | 1.11.1.6 | from API Coryne |
| 23202 | cystine arylamidase | +/- | 3.4.11.3 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 23202 | cytochrome oxidase | - | 1.9.3.1 | |
| 23202 | DNase | - | ||
| 123677 | DNase | - | ||
| 23202 | esterase (C 4) | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 23202 | esterase lipase (C 8) | +/- | ||
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 123677 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 123677 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68380 | glutamate decarboxylase | + | 4.1.1.15 | from API rID32A |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68380 | glycin arylamidase | + | from API rID32A | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 68380 | histidine arylamidase | + | from API rID32A | |
| 68380 | L-arginine arylamidase | + | from API rID32A | |
| 123677 | lecithinase | - | ||
| 23202 | leucine arylamidase | +/- | 3.4.11.1 | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68380 | leucine arylamidase | + | 3.4.11.1 | from API rID32A |
| 68380 | leucyl glycin arylamidase | + | 3.4.11.1 | from API rID32A |
| 123677 | lipase | - | ||
| 23202 | lipase (C 14) | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 123677 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68380 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32A |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 23202 | naphthol-AS-BI-phosphohydrolase | + | ||
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 23202 | nitrate reductase | +/- | 1.7.99.4 | |
| 123677 | ornithine decarboxylase | - | 4.1.1.17 | |
| 123677 | oxidase | - | ||
| 123677 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68380 | phenylalanine arylamidase | + | from API rID32A | |
| 68380 | proline-arylamidase | + | 3.4.11.5 | from API rID32A |
| 123677 | protease | - | ||
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68381 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API rID32STR |
| 68380 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API rID32A |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API Coryne |
| 68380 | serine arylamidase | + | from API rID32A | |
| 23202 | trypsin | - | 3.4.21.4 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 123677 | tryptophan deaminase | - | ||
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 123677 | tween esterase | + | ||
| 68380 | tyrosine arylamidase | - | from API rID32A | |
| 123677 | urease | - | 3.5.1.5 | |
| 68381 | urease | + | 3.5.1.5 | from API rID32STR |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| 23202 | valine arylamidase | +/- | ||
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123677 | not determinedn.d. | + | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | + | - | + |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56770 | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | + | - | - | + | - | - | - | - | - | - | - | - | + |
Global distribution of 16S sequence X84247 (>99% sequence identity) for Corynebacterium from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM1672836v1 assembly for Corynebacterium tuberculostearicum FDAARGOS_1117 | complete | 38304 | 97 | ||||
| 67770 | ASM1340844v1 assembly for Corynebacterium tuberculostearicum DSM 44922 | contig | 38304 | 77.02 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Corynebacterium tuberculostearicum 16S rRNA gene, strain ATCC 35692 | X84247 | 1479 | 38304 | ||
| 20218 | Corynebacterium tuberculostearicum strain CIP 107291 16S ribosomal RNA gene, partial sequence | AY965875 | 443 | 38304 | ||
| 12195 | Corynebacterium sp. CIP107291 partial 16S rRNA gene | AJ438050 | 1512 | 38304 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 94.60 | no |
| 125439 | motility | BacteriaNetⓘ | no | 91.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 83.80 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 96.10 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.87 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 94.95 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 81.93 | no |
| 125438 | aerobic | aerobicⓘ | no | 60.48 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.58 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 95.00 | yes |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Genomic characterization of the C. tuberculostearicum species complex, a prominent member of the human skin microbiome. | Ahmed N, Joglekar P, Deming C, NISC Comparative Sequencing Program, Lemon KP, Kong HH, Segre JA, Conlan S. | mSystems | 10.1128/msystems.00632-23 | 2023 | |
| Genetics | Expanding the Bacterial Diversity of the Female Urinary Microbiome: Description of Eight New Corynebacterium Species. | Cappelli EA, Ksiezarek M, Wolf J, Neumann-Schaal M, Ribeiro TG, Peixe L. | Microorganisms | 10.3390/microorganisms11020388 | 2023 | |
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| Commiphora wildii Merxm. Essential Oil: Natural Heptane Source and Co-Product Valorization. | Mansouri D, Landreau A, Michel T, De Saint Jores C, Razafimandimby B, Kempf M, Azoulay S, Papaiconomou N, Fernandez X. | Molecules | 10.3390/molecules28020891 | 2023 | ||
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| Bacterial microbiome and host inflammatory gene expression in foreskin tissue. | Maust BS, Petkov S, Herrera C, Feng C, Brown BP, Lebina L, Opoka D, Ssemata A, Pillay N, Serwanga J, Seatlholo P, Namubiru P, Odoch G, Mugaba S, Seiphetlo T, Gray CM, Kaleebu P, Webb EL, Martinson N, Chiodi F, Fox J, Jaspan HB, CHAPS team. | Heliyon | 10.1016/j.heliyon.2023.e22145 | 2023 | ||
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| Phylogeny | Microbiota in Umbilical Dirt and Its Relationship with Odor. | Yano T, Okajima T, Tsuchiya S, Tsujimura H. | Microbes Environ | 10.1264/jsme2.me23007 | 2023 | |
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| Extranasal extranodal NK/T cell lymphoma: A post-transplantation lymphoproliferative disease. | Acar A, Nurlu E, Sokmen N, Ozsan N, Davulcu EA, Ceylan C. | Int Wound J | 10.1111/iwj.13126 | 2019 | ||
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| Pathogenicity | Macrolide, lincosamide, and streptogramin B resistance in lipophilic Corynebacteria inhabiting healthy human skin. | Szemraj M, Kwaszewska A, Pawlak R, Szewczyk EM. | Microb Drug Resist | 10.1089/mdr.2013.0192 | 2014 | |
| Genetics | Direct metagenomics investigation of non-surgical hard-to-heal wounds: a review. | Morsli M, Salipante F, Magnan C, Dunyach-Remy C, Sotto A, Lavigne JP. | Ann Clin Microbiol Antimicrob | 10.1186/s12941-024-00698-z | 2024 | |
| Impact of tissue processing on microbiological colonization in the context of placentophagy. | Johnson SK, Pastuschek J, Benyshek DC, Heimann Y, Moller A, Rodel J, White J, Zollkau J, Groten T. | Sci Rep | 10.1038/s41598-022-09243-4 | 2022 | ||
| Genetics | Species- and strain-level diversity of Corynebacteria isolated from human facial skin. | Jensen MG, Svraka L, Baez E, Lund M, Poehlein A, Bruggemann H. | BMC Microbiol | 10.1186/s12866-023-03129-9 | 2023 | |
| Anterior Nares Diversity and Pathobionts Represent Sinus Microbiome in Chronic Rhinosinusitis. | De Boeck I, Wittouck S, Martens K, Claes J, Jorissen M, Steelant B, van den Broek MFL, Seys SF, Hellings PW, Vanderveken OM, Lebeer S. | mSphere | 10.1128/msphere.00532-19 | 2019 | ||
| Pathogenicity | Reactive oxygen species and the bacteriostatic and bactericidal effects of isoconazole nitrate. | Czaika VA, Siebenbrock J, Czekalla F, Zuberbier T, Sieber MA. | Mycoses | 10.1111/myc.12055 | 2013 | |
| Genetics | Respiratory Bacterial Microbiota and Individual Bacterial Variability in Lung Cancer and Bronchiectasis Patients. | Ekanayake A, Madegedara D, Chandrasekharan V, Magana-Arachchi D. | Indian J Microbiol | 10.1007/s12088-019-00850-w | 2020 | |
| Evolutionary investigations of the biosynthetic diversity in the skin microbiome using lsaBGC. | Salamzade R, Cheong JZA, Sandstrom S, Swaney MH, Stubbendieck RM, Starr NL, Currie CR, Singh AM, Kalan LR. | Microb Genom | 10.1099/mgen.0.000988 | 2023 | ||
| Simultaneous profiling and cultivation of the skin microbiome of healthy young adult skin for the development of therapeutic agents. | Khayyira AS, Rosdina AE, Irianti MI, Malik A. | Heliyon | 10.1016/j.heliyon.2020.e03700 | 2020 | ||
| Idiopathic Granulomatous Mastitis-A Mystery Yet to be Unraveled: A Case Series and Review of Literature. | Mathew Thomas V, Alexander SA, Bindal P, Vredenburgh J. | Cureus | 10.7759/cureus.6895 | 2020 | ||
| Correlation Analysis of the Microbiome and Immune Function in the Lung-Gut Axis of Critically Ill Patients in the ICU. | Liu B, Yu Y, Zhao M, Xiao K, Yan P, Duan Z, Wang K, Zhao N, Cao J, Wang J, Xie L. | Front Med (Lausanne) | 10.3389/fmed.2022.808302 | 2022 | ||
| Contamination analysis of Arctic ice samples as planetary field analogs and implications for future life-detection missions to Europa and Enceladus. | Coelho LF, Blais MA, Matveev A, Keller-Costa T, Vincent WF, Costa R, Martins Z, Canario J. | Sci Rep | 10.1038/s41598-022-16370-5 | 2022 | ||
| Enzymology | Corynebacterium Species Rarely Cause Orthopedic Infections. | Kalt F, Schulthess B, Sidler F, Herren S, Fucentese SF, Zingg PO, Berli M, Zinkernagel AS, Zbinden R, Achermann Y. | J Clin Microbiol | 10.1128/jcm.01200-18 | 2018 | |
| The Skin Microbiome and Bioactive Compounds: Mechanisms of Modulation, Dysbiosis, and Dermatological Implications. | Wojciechowska K, Dos Santos Szewczyk K. | Molecules | 10.3390/molecules30224363 | 2025 | ||
| Systematic Review of Actinomycetes in the Baijiu Fermentation Microbiome. | Chen C, Yang H, Liu J, Luo H, Zou W. | Foods | 10.3390/foods11223551 | 2022 | ||
| Deep nasal sinus cavity microbiota dysbiosis in Parkinson's disease. | Pal G, Ramirez V, Engen PA, Naqib A, Forsyth CB, Green SJ, Mahdavinia M, Batra PS, Tajudeen BA, Keshavarzian A. | NPJ Parkinsons Dis | 10.1038/s41531-021-00254-y | 2021 | ||
| Pathogenicity | Decrypting Skin Microbiome in Psoriasis: Current Status. | Arya P, Kaur M, Chosyang S, Kushwaha N, Singh B. | J Psoriasis Psoriatic Arthritis | 10.1177/24755303231194293 | 2023 | |
| Meconium microbiome and its relation to neonatal growth and head circumference catch-up in preterm infants. | Terrazzan Nutricionist AC, Procianoy RS, Roesch LFW, Corso AL, Corso AL, Dobbler PT, Silveira RC. | PLoS One | 10.1371/journal.pone.0238632 | 2020 | ||
| Genetics | Targeted next generation sequencing for elbow periprosthetic joint infection diagnosis. | Flurin L, Wolf MJ, Greenwood-Quaintance KE, Sanchez-Sotelo J, Patel R. | Diagn Microbiol Infect Dis | 10.1016/j.diagmicrobio.2021.115448 | 2021 | |
| Determining Informative Microbial Single Nucleotide Polymorphisms for Human Identification. | Sherier AJ, Woerner AE, Budowle B. | Appl Environ Microbiol | 10.1128/aem.00052-22 | 2022 | ||
| Metabarcoding analysis of the microbiota in flocks naturally infected by Coxiella burnetii: First description of the global microbiota in domestic small ruminants. | Toledo-Perona R, Gomez-Martin A, Contreras A, Toquet M, Quereda JJ, Esnal A, Gonzalez-Torres P, Gomis J. | One Health | 10.1016/j.onehlt.2025.100996 | 2025 | ||
| Genetics | Whole genome sequencing and characterization of Corynebacterium isolated from the healthy and dry eye ocular surface. | Naqvi M, Utheim TP, Charnock C. | BMC Microbiol | 10.1186/s12866-024-03517-9 | 2024 | |
| Characterization and Analysis of the Skin Microbiota in Acne: Impact of Systemic Antibiotics. | Park SY, Kim HS, Lee SH, Kim S. | J Clin Med | 10.3390/jcm9010168 | 2020 | ||
| Urinary microbes and postoperative urinary tract infection risk in urogynecologic surgical patients. | Thomas-White KJ, Gao X, Lin H, Fok CS, Ghanayem K, Mueller ER, Dong Q, Brubaker L, Wolfe AJ. | Int Urogynecol J | 10.1007/s00192-018-3767-3 | 2018 | ||
| Pathogenicity | Unraveling the role of the microbiome in chronic rhinosinusitis. | Psaltis AJ, Mackenzie BW, Cope EK, Ramakrishnan VR. | J Allergy Clin Immunol | 10.1016/j.jaci.2022.02.022 | 2022 | |
| Characterization and Analysis of the Skin Microbiota in Rosacea: Impact of Systemic Antibiotics. | Woo YR, Lee SH, Cho SH, Lee JD, Kim HS. | J Clin Med | 10.3390/jcm9010185 | 2020 | ||
| Skin bacterial flora as a potential risk factor predisposing to late bacterial infection after cross-linked hyaluronic acid gel augmentation. | Netsvyetayeva I, Marusza W, Olszanski R, Szyller K, Krolak-Ulinska A, Swoboda-Kopec E, Sierdzinski J, Szymonski Z, Mlynarczyk G. | Infect Drug Resist | 10.2147/idr.s154328 | 2018 | ||
| Phylogeny | Taxonomic profiling of skin microbiome and correlation with clinical skin parameters in healthy Koreans. | Kim JH, Son SM, Park H, Kim BK, Choi IS, Kim H, Huh CS. | Sci Rep | 10.1038/s41598-021-95734-9 | 2021 | |
| Comparison of the ocular surface microbiota between thyroid-associated ophthalmopathy patients and healthy subjects. | Ji X, Dong K, Pu J, Yang J, Zhang Z, Ning X, Ma Q, Kang Z, Xu J, Sun B. | Front Cell Infect Microbiol | 10.3389/fcimb.2022.914749 | 2022 | ||
| Persistent enrichment of multidrug-resistant Klebsiella in oral and nasal communities during long-term starvation. | Liu J, Spencer N, Utter DR, Grossman AS, Lei L, Dos Santos NC, Shi W, Baker JL, Hasturk H, He X, Bor B. | Microbiome | 10.1186/s40168-024-01854-5 | 2024 | ||
| Cefiderocol for Extensively Drug-Resistant Gram-Negative Bacterial Infections: Real-world Experience From a Case Series and Review of the Literature. | Zingg S, Nicoletti GJ, Kuster S, Junker M, Widmer A, Egli A, Hinic V, Sendi P, Battegay M, Battig V, Khanna N, Tschudin-Sutter S. | Open Forum Infect Dis | 10.1093/ofid/ofaa185 | 2020 | ||
| Diagnostic and prognostic potential of the microbiome in ovarian cancer treatment response. | Asangba AE, Chen J, Goergen KM, Larson MC, Oberg AL, Casarin J, Multinu F, Kaufmann SH, Mariani A, Chia N, Walther-Antonio MRS. | Sci Rep | 10.1038/s41598-023-27555-x | 2023 | ||
| Individual Identification with Short Tandem Repeat Analysis and Collection of Secondary Information Using Microbiome Analysis. | Lee S, You H, Lee S, Lee Y, Kang HG, Sung HJ, Choi J, Hyun S. | Genes (Basel) | 10.3390/genes13010085 | 2021 | ||
| Microbiota-Associated HAF-EVs Regulate Monocytes by Triggering or Inhibiting Inflammasome Activation. | Nunzi E, Mezzasoma L, Bellezza I, Zelante T, Orvietani P, Coata G, Giardina I, Sagini K, Manni G, Di Michele A, Gargaro M, Talesa VN, Di Renzo GC, Fallarino F, Romani R. | Int J Mol Sci | 10.3390/ijms24032527 | 2023 | ||
| Patient genetics is linked to chronic wound microbiome composition and healing. | Tipton CD, Wolcott RD, Sanford NE, Miller C, Pathak G, Silzer TK, Sun J, Fleming D, Rumbaugh KP, Little TD, Phillips N, Phillips CD. | PLoS Pathog | 10.1371/journal.ppat.1008511 | 2020 | ||
| Microbiome Profile in Patients with Adult Balanoposthitis: Relationship with Redundant Prepuce, Genital Mucosa Physical Barrier Status and Inflammation. | Li M, Mao JX, Jiang HH, Huang CM, Gao XH, Zhang L. | Acta Derm Venereol | 10.2340/00015555-3833 | 2021 | ||
| Genetic and chemical control of tuberculostearic acid production in Mycobacterium avium subspecies paratuberculosis. | Bannantine JP, Duffy SC, Colombatti Olivieri MA, Behr MA, Biet F, Price NPJ. | Microbiol Spectr | 10.1128/spectrum.00508-24 | 2024 | ||
| Enzymology | Characterising clinical Staphylococcus aureus isolates from the sinuses of patients with chronic rhinosinusitis. | Wagner Mackenzie B, Zoing M, Clow F, Waite DW, Radcliff FJ, Taylor MW, Biswas K, Douglas RG. | Sci Rep | 10.1038/s41598-021-01297-0 | 2021 | |
| Smartphones as an Ecological Niche of Microorganisms: Microbial Activities, Assembly, and Opportunistic Pathogens. | He J, Shen X, Zhang N, Sun C, Shao Y. | Microbiol Spectr | 10.1128/spectrum.01508-22 | 2022 | ||
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| Microbiological Aspects of Acute and Chronic Pediatric Rhinosinusitis. | Drago L, Pignataro L, Torretta S. | J Clin Med | 10.3390/jcm8020149 | 2019 | ||
| Application of metagenomic next-generation sequencing in the diagnosis of urinary tract infection in patients undergoing cutaneous ureterostomy. | Huang R, Yuan Q, Gao J, Liu Y, Jin X, Tang L, Cao Y. | Front Cell Infect Microbiol | 10.3389/fcimb.2023.991011 | 2023 | ||
| Differential Microbial Signature Associated With Benign Prostatic Hyperplasia and Prostate Cancer. | Sarkar P, Malik S, Banerjee A, Datta C, Pal DK, Ghosh A, Saha A. | Front Cell Infect Microbiol | 10.3389/fcimb.2022.894777 | 2022 | ||
| Fomite Transmission Follows Invasion Ecology Principles. | Wang P, Tong X, Zhang N, Miao T, Chan JPT, Huang H, Lee PKH, Li Y. | mSystems | 10.1128/msystems.00211-22 | 2022 | ||
| Strain heterogeneity, cooccurrence network, taxonomic composition and functional profile of the healthy ocular surface microbiome. | Kang Y, Lin S, Ma X, Che Y, Chen Y, Wan T, Zhang D, Shao J, Xu J, Xu Y, Lou Y, Zheng M. | Eye Vis (Lond) | 10.1186/s40662-021-00228-4 | 2021 | ||
| Microbiota in Rosacea. | Kim HS. | Am J Clin Dermatol | 10.1007/s40257-020-00546-8 | 2020 | ||
| Smells Like Teen Spirit-A Model to Generate Laundry-Associated Malodour In Vitro. | Zinn MK, Singer M, Bockmuhl D. | Microorganisms | 10.3390/microorganisms9050974 | 2021 | ||
| Phylogeny | Characterization of the skin microbiota in bullous pemphigoid patients and controls reveals novel microbial indicators of disease. | Belheouane M, Hermes BM, Van Beek N, Benoit S, Bernard P, Drenovska K, Gerdes S, Glaser R, Goebeler M, Gunther C, von Georg A, Hammers CM, Holtsche MM, Homey B, Horvath ON, Hubner F, Linnemann B, Joly P, Marton D, Patsatsi A, Pfohler C, Sardy M, Huilaja L, Vassileva S, Zillikens D, Ibrahim S, Sadik CD, Schmidt E, Baines JF. | J Adv Res | 10.1016/j.jare.2022.03.019 | 2023 | |
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| Circulating Antibodies to Skin Bacteria Detected by Serological Lateral Flow Immunoassays Differentially Correlated With Bacterial Abundance. | Huang RY, Lee CN, Moochhala S. | Front Microbiol | 10.3389/fmicb.2021.709562 | 2021 | ||
| Enzymology | Application of PCR-SSCP for molecular epidemiological studies on the exposure of farm children to bacteria in environmental dust. | Korthals M, Ege MJ, Tebbe CC, von Mutius E, Bauer J. | J Microbiol Methods | 10.1016/j.mimet.2008.01.010 | 2008 | |
| Comprehensive Analysis of the Effect of Probiotic Intake by the Mother on Human Breast Milk and Infant Fecal Microbiota. | Shin DY, Park J, Yi DY. | J Korean Med Sci | 10.3346/jkms.2021.36.e58 | 2021 | ||
| Comparison of the human microbiome in adults and children with chronic rhinosinusitis. | Park IH, Lee JS, Park JH, Kang SH, Hong SM, Park IS, Yoon JH, Hong SJ. | PLoS One | 10.1371/journal.pone.0242770 | 2020 | ||
| Intravenous immunoglobulin in necrotizing fasciitis - A case report and review of recent literature. | Koch C, Hecker A, Grau V, Padberg W, Wolff M, Henrich M. | Ann Med Surg (Lond) | 10.1016/j.amsu.2015.07.017 | 2015 | ||
| Lactobacillus sakei suppresses collagen-induced arthritis and modulates the differentiation of T helper 17 cells and regulatory B cells. | Jhun J, Min HK, Ryu J, Lee SY, Ryu JG, Choi JW, Na HS, Lee SY, Jung Y, Park SJ, Park MS, Kwon B, Ji GE, Cho ML, Park SH. | J Transl Med | 10.1186/s12967-020-02477-8 | 2020 | ||
| Sinus microbiome diversity depletion and Corynebacterium tuberculostearicum enrichment mediates rhinosinusitis. | Abreu NA, Nagalingam NA, Song Y, Roediger FC, Pletcher SD, Goldberg AN, Lynch SV. | Sci Transl Med | 10.1126/scitranslmed.3003783 | 2012 | ||
| Phylogeny | Mapping axillary microbiota responsible for body odours using a culture-independent approach. | Troccaz M, Gaia N, Beccucci S, Schrenzel J, Cayeux I, Starkenmann C, Lazarevic V. | Microbiome | 10.1186/s40168-014-0064-3 | 2015 | |
| Enzymology | Evaluation of three sample preparation methods for the direct identification of bacteria in positive blood cultures by MALDI-TOF. | Tanner H, Evans JT, Gossain S, Hussain A. | BMC Res Notes | 10.1186/s13104-016-2366-y | 2017 | |
| Pathogenicity | Microbes, Histology, Blood Analysis, Enterotoxins, and Cytokines: Findings From the ASERF Systemic Symptoms in Women-Biospecimen Analysis Study: Part 3. | McGuire P, Glicksman C, Wixtrom R, Sung CJ, Hamilton R, Lawrence M, Haws M, Ferenz S, Kadin M. | Aesthet Surg J | 10.1093/asj/sjac225 | 2023 | |
| Phylogeny | Microbiome Compositions From Infertile Couples Seeking In Vitro Fertilization, Using 16S rRNA Gene Sequencing Methods: Any Correlation to Clinical Outcomes? | Okwelogu SI, Ikechebelu JI, Agbakoba NR, Anukam KC. | Front Cell Infect Microbiol | 10.3389/fcimb.2021.709372 | 2021 | |
| Genetics | Improving the sensitivity of long read overlap detection using grouped short k-mer matches. | Du N, Chen J, Sun Y. | BMC Genomics | 10.1186/s12864-019-5475-x | 2019 | |
| Location and condition based reconstruction of colon cancer microbiome from human RNA sequencing data. | Sambruni G, Macandog AD, Wirbel J, Cagnina D, Catozzi C, Dallavilla T, Borgo F, Fazio N, Fumagalli-Romario U, Petz WL, Manzo T, Ravenda SP, Zeller G, Nezi L, Schaefer MH. | Genome Med | 10.1186/s13073-023-01180-9 | 2023 | ||
| Oral Microbiota Profile in Patients with Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis. | Esberg A, Johansson L, Berglin E, Mohammad AJ, Jonsson AP, Dahlqvist J, Stegmayr B, Johansson I, Rantapaa-Dahlqvist S. | Microorganisms | 10.3390/microorganisms10081572 | 2022 | ||
| Genetics | Forensic Human Identification Using Skin Microbiomes. | Schmedes SE, Woerner AE, Budowle B. | Appl Environ Microbiol | 10.1128/aem.01672-17 | 2017 | |
| Phylogeny | SEPATH: benchmarking the search for pathogens in human tissue whole genome sequence data leads to template pipelines. | Gihawi A, Rallapalli G, Hurst R, Cooper CS, Leggett RM, Brewer DS. | Genome Biol | 10.1186/s13059-019-1819-8 | 2019 | |
| The microbiome of the middle meatus in healthy adults. | Ramakrishnan VR, Feazel LM, Gitomer SA, Ir D, Robertson CE, Frank DN. | PLoS One | 10.1371/journal.pone.0085507 | 2013 | ||
| Phylogeny | Distinct Changes Occur in the Human Breast Milk Microbiome Between Early and Established Lactation in Breastfeeding Guatemalan Mothers. | Gonzalez E, Brereton NJB, Li C, Lopez Leyva L, Solomons NW, Agellon LB, Scott ME, Koski KG. | Front Microbiol | 10.3389/fmicb.2021.557180 | 2021 | |
| Pathogenicity | Corynebacterium tuberculostearicum: a potentially misidentified and multiresistant Corynebacterium species isolated from clinical specimens. | Hinic V, Lang C, Weisser M, Straub C, Frei R, Goldenberger D. | J Clin Microbiol | 10.1128/jcm.00386-12 | 2012 | |
| Phylogeny | Analysis of Sinonasal Microbiota in Exacerbations of Chronic Rhinosinusitis Subgroups. | Vandelaar LJ, Hanson B, Marino M, Yao WC, Luong AU, Arias CA, Ramakrishnan V, Citardi MJ. | OTO Open | 10.1177/2473974x19875100 | 2019 | |
| Pathogenicity | In vitro Antimicrobial Activity of Acne Drugs Against Skin-Associated Bacteria. | Blaskovich MAT, Elliott AG, Kavanagh AM, Ramu S, Cooper MA. | Sci Rep | 10.1038/s41598-019-50746-4 | 2019 | |
| Enzymology | 3-Methyl-3-sulfanylhexan-1-ol as a major descriptor for the human axilla-sweat odour profile. | Troccaz M, Starkenmann C, Niclass Y, van de Waal M, Clark AJ. | Chem Biodivers | 10.1002/cbdv.200490077 | 2004 | |
| Identification and Analysis of Human Microbe-Disease Associations by Matrix Decomposition and Label Propagation. | Qu J, Zhao Y, Yin J. | Front Microbiol | 10.3389/fmicb.2019.00291 | 2019 | ||
| Enzymology | Corynebacterium species isolated from patients with mastitis. | Paviour S, Musaad S, Roberts S, Taylor G, Taylor S, Shore K, Lang S, Holland D. | Clin Infect Dis | 10.1086/344463 | 2002 | |
| Enzymology | Characterisation of the nasal microbiota in granulomatosis with polyangiitis. | Rhee RL, Sreih AG, Najem CE, Grayson PC, Zhao C, Bittinger K, Collman RG, Merkel PA. | Ann Rheum Dis | 10.1136/annrheumdis-2018-213645 | 2018 | |
| Lactic acid bacteria as probiotics for the nose? | De Boeck I, Spacova I, Vanderveken OM, Lebeer S. | Microb Biotechnol | 10.1111/1751-7915.13759 | 2021 | ||
| Enzymology | Evidence for contamination as the origin for bacteria found in human placenta rather than a microbiota. | Gschwind R, Fournier T, Kennedy S, Tsatsaris V, Cordier AG, Barbut F, Butel MJ, Wydau-Dematteis S. | PLoS One | 10.1371/journal.pone.0237232 | 2020 | |
| Taxonomy and Molecular Phylogeny of Two New Species of Prostomatean Ciliates With Establishment of Foissnerophrys gen. n. (Alveolata, Ciliophora). | Jiang L, Zhuang W, El-Serehy HA, Al-Farraj SA, Warren A, Hu X. | Front Microbiol | 10.3389/fmicb.2021.686929 | 2021 | ||
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| Broad-Range PCR Coupled with Electrospray Ionization Time of Flight Mass Spectrometry for Detection of Bacteremia and Fungemia in Patients with Neutropenic Fever. | Desmet S, Maertens J, Bueselinck K, Lagrou K. | J Clin Microbiol | 10.1128/jcm.01066-16 | 2016 | ||
| Effect of Sample Collection (Manual Expression vs. Pumping) and Skimming on the Microbial Profile of Human Milk Using Culture Techniques and Metataxonomic Analysis. | Rodriguez-Cruz M, Alba C, Aparicio M, Checa MA, Fernandez L, Rodriguez JM. | Microorganisms | 10.3390/microorganisms8091278 | 2020 | ||
| The microbiome of the upper airways: focus on chronic rhinosinusitis. | Chalermwatanachai T, Velasquez LC, Bachert C. | World Allergy Organ J | 10.1186/s40413-014-0048-6 | 2015 | ||
| Enzymology | Evaluation of the Bruker MALDI Biotyper for identification of Gram-positive rods: development of a diagnostic algorithm for the clinical laboratory. | Schulthess B, Bloemberg GV, Zbinden R, Bottger EC, Hombach M. | J Clin Microbiol | 10.1128/jcm.02399-13 | 2014 | |
| Potential human pathogenic bacteria in five hot springs in Eritrea revealed by next generation sequencing. | Ghilamicael AM, Boga HI, Anami SE, Mehari T, Budambula NLM. | PLoS One | 10.1371/journal.pone.0194554 | 2018 | ||
| Transcriptome | Real-Time Culture-Independent Microbial Profiling Onboard the International Space Station Using Nanopore Sequencing. | Stahl-Rommel S, Jain M, Nguyen HN, Arnold RR, Aunon-Chancellor SM, Sharp GM, Castro CL, John KK, Juul S, Turner DJ, Stoddart D, Paten B, Akeson M, Burton AS, Castro-Wallace SL. | Genes (Basel) | 10.3390/genes12010106 | 2021 | |
| Bone and Joint Infection Involving Corynebacterium spp.: From Clinical Features to Pathophysiological Pathways. | Chauvelot P, Ferry T, Tafani V, Diot A, Tasse J, Conrad A, Chidiac C, Braun E, Lustig S, Laurent F, Valour F. | Front Med (Lausanne) | 10.3389/fmed.2020.539501 | 2020 | ||
| Identification of Emerging Human Mastitis Pathogens by MALDI-TOF and Assessment of Their Antibiotic Resistance Patterns. | Marin M, Arroyo R, Espinosa-Martos I, Fernandez L, Rodriguez JM. | Front Microbiol | 10.3389/fmicb.2017.01258 | 2017 | ||
| The Bigger Picture: Why Oral Mucosa Heals Better Than Skin. | Waasdorp M, Krom BP, Bikker FJ, van Zuijlen PPM, Niessen FB, Gibbs S. | Biomolecules | 10.3390/biom11081165 | 2021 | ||
| Rosacea, microbiome and probiotics: the gut-skin axis. | Sanchez-Pellicer P, Eguren-Michelena C, Garcia-Gavin J, Llamas-Velasco M, Navarro-Moratalla L, Nunez-Delegido E, Aguera-Santos J, Navarro-Lopez V. | Front Microbiol | 10.3389/fmicb.2023.1323644 | 2023 | ||
| Preliminary evaluation of a rapid lateral flow calprotectin test for the diagnosis of prosthetic joint infection. | Trotter AJ, Dean R, Whitehouse CE, Mikalsen J, Hill C, Brunton-Sim R, Kay GL, Shakokani M, Durst AZE, Wain J, McNamara I, O'Grady J. | Bone Joint Res | 10.1302/2046-3758.95.bjr-2019-0213.r1 | 2020 | ||
| Review: The Nose as a Route for Therapy. Part 2 Immunotherapy. | Padayachee Y, Flicker S, Linton S, Cafferkey J, Kon OM, Johnston SL, Ellis AK, Desrosiers M, Turner P, Valenta R, Scadding GK. | Front Allergy | 10.3389/falgy.2021.668781 | 2021 | ||
| Pathogenicity | Impact of saline irrigation and topical corticosteroids on the postsurgical sinonasal microbiota. | Liu CM, Kohanski MA, Mendiola M, Soldanova K, Dwan MG, Lester R, Nordstrom L, Price LB, Lane AP. | Int Forum Allergy Rhinol | 10.1002/alr.21467 | 2015 | |
| Pathogenicity | When Good Bugs Go Bad: Epidemiology and Antimicrobial Resistance Profiles of Corynebacterium striatum, an Emerging Multidrug-Resistant, Opportunistic Pathogen. | McMullen AR, Anderson N, Wallace MA, Shupe A, Burnham CA. | Antimicrob Agents Chemother | 10.1128/aac.01111-17 | 2017 | |
| Enzymology | Identification of opportunistic pathogenic bacteria in drinking water samples of different rural health centers and their clinical impacts on humans. | Pindi PK, Yadav PR, Shanker AS. | Biomed Res Int | 10.1155/2013/348250 | 2013 | |
| Microbial invasion of the amniotic cavity in preeclampsia as assessed by cultivation and sequence-based methods. | DiGiulio DB, Gervasi M, Romero R, Mazaki-Tovi S, Vaisbuch E, Kusanovic JP, Seok KS, Gomez R, Mittal P, Gotsch F, Chaiworapongsa T, Oyarzun E, Kim CJ, Relman DA. | J Perinat Med | 10.1515/jpm.2010.078 | 2010 | ||
| Perturbation of Alphavirus and Flavivirus Infectivity by Components of the Bacterial Cell Wall. | Langendries L, Jacobs S, Abdelnabi R, Verwimp S, Kaptein S, Baatsen P, Van Mellaert L, Delang L. | J Virol | 10.1128/jvi.00060-22 | 2022 | ||
| Enzymology | Mammary candidiasis: A medical condition without scientific evidence? | Jimenez E, Arroyo R, Cardenas N, Marin M, Serrano P, Fernandez L, Rodriguez JM. | PLoS One | 10.1371/journal.pone.0181071 | 2017 | |
| Challenges in exploring and manipulating the human skin microbiome. | Boxberger M, Cenizo V, Cassir N, La Scola B. | Microbiome | 10.1186/s40168-021-01062-5 | 2021 | ||
| Clinical Performance Evaluation of VersaTrek 528 Blood Culture System in a Chinese Tertiary Hospital. | Yue P, Zhou M, Kudinha T, Xie X, Du J, Song H, Zhang L, Ma X, Weng L, Chai W, Zhu H, Yang Q, Xu YC. | Front Microbiol | 10.3389/fmicb.2018.02027 | 2018 | ||
| Co-infection of Malassezia sympodialis With Bacterial Pathobionts Pseudomonas aeruginosa or Staphylococcus aureus Leads to Distinct Sinonasal Inflammatory Responses in a Murine Acute Sinusitis Model. | Lee K, Zhang I, Kyman S, Kask O, Cope EK. | Front Cell Infect Microbiol | 10.3389/fcimb.2020.00472 | 2020 | ||
| Enzymology | Chronic rhinosinusitis with nasal polyps is characterized by dysbacteriosis of the nasal microbiota. | Chalermwatanachai T, Vilchez-Vargas R, Holtappels G, Lacoere T, Jauregui R, Kerckhof FM, Pieper DH, Van de Wiele T, Vaneechoutte M, Van Zele T, Bachert C. | Sci Rep | 10.1038/s41598-018-26327-2 | 2018 | |
| Biomarkers and molecular analysis to improve bloodstream infection diagnostics in an emergency care unit. | Loonen AJ, de Jager CP, Tosserams J, Kusters R, Hilbink M, Wever PC, van den Brule AJ. | PLoS One | 10.1371/journal.pone.0087315 | 2014 | ||
| Distortions in development of intestinal microbiota associated with late onset sepsis in preterm infants. | Mai V, Torrazza RM, Ukhanova M, Wang X, Sun Y, Li N, Shuster J, Sharma R, Hudak ML, Neu J. | PLoS One | 10.1371/journal.pone.0052876 | 2013 | ||
| Integrated genomic, epidemiologic investigation of Candida auris skin colonization in a skilled nursing facility. | Proctor DM, Dangana T, Sexton DJ, Fukuda C, Yelin RD, Stanley M, Bell PB, Baskaran S, Deming C, Chen Q, Conlan S, Park M, NISC Comparative Sequencing Program, Welsh RM, Vallabhaneni S, Chiller T, Forsberg K, Black SR, Pacilli M, Kong HH, Lin MY, Schoeny ME, Litvintseva AP, Segre JA, Hayden MK. | Nat Med | 10.1038/s41591-021-01383-w | 2021 | ||
| Analysis of bacterial DNA in synovial tissue of Tunisian patients with reactive and undifferentiated arthritis by broad-range PCR, cloning and sequencing. | Siala M, Jaulhac B, Gdoura R, Sibilia J, Fourati H, Younes M, Baklouti S, Bargaoui N, Sellami S, Znazen A, Barthel C, Collin E, Hammami A, Sghir A. | Arthritis Res Ther | 10.1186/ar2398 | 2008 | ||
| Enzymology | Impact of the Human Microbiome in Forensic Sciences: a Systematic Review. | Garcia MG, Perez-Carceles MD, Osuna E, Legaz I. | Appl Environ Microbiol | 10.1128/aem.01451-20 | 2020 | |
| Antimicrobial Chemicals Associate with Microbial Function and Antibiotic Resistance Indoors. | Fahimipour AK, Ben Mamaar S, McFarland AG, Blaustein RA, Chen J, Glawe AJ, Kline J, Green JL, Halden RU, Van Den Wymelenberg K, Huttenhower C, Hartmann EM. | mSystems | 10.1128/msystems.00200-18 | 2018 | ||
| DNA methylation in leprosy-associated bacteria: Mycobacterium leprae and Corynebacterium tuberculostearicum. | Hottat F, Coene M, Cocito C. | Med Microbiol Immunol | 10.1007/bf00190309 | 1988 | ||
| Metabolism | Biogeography of Bacterial Communities and Specialized Metabolism in Human Aerodigestive Tract Microbiomes. | Stubbendieck RM, Zelasko SE, Safdar N, Currie CR. | Microbiol Spectr | 10.1128/spectrum.01669-21 | 2021 | |
| Cohabitation--relationships of corynebacteria and staphylococci on human skin. | Kwaszewska A, Sobis-Glinkowska M, Szewczyk EM. | Folia Microbiol (Praha) | 10.1007/s12223-014-0326-2 | 2014 | ||
| Phylogeny | The nasal microbiota in health and disease: variation within and between subjects | Biswas K, Hoggard M, Jain R, Taylor M, Douglas R. | Front Microbiol | 2015 | ||
| Mobile phones carry the personal microbiome of their owners. | Meadow JF, Altrichter AE, Green JL. | PeerJ | 10.7717/peerj.447 | 2014 | ||
| Phylogeny | Nasopharyngeal microbiota composition of children is related to the frequency of upper respiratory infection and acute sinusitis. | Santee CA, Nagalingam NA, Faruqi AA, DeMuri GP, Gern JE, Wald ER, Lynch SV. | Microbiome | 10.1186/s40168-016-0179-9 | 2016 | |
| Phylogeny | Acne is not associated with yet-uncultured bacteria. | Bek-Thomsen M, Lomholt HB, Kilian M. | J Clin Microbiol | 10.1128/jcm.00799-08 | 2008 | |
| Genetics | Prospective assessment of the gastroesophageal microbiome in VLBW neonates. | Milisavljevic V, Garg M, Vuletic I, Miller JF, Kim L, Cunningham TD, Schroder I. | BMC Pediatr | 10.1186/1471-2431-13-49 | 2013 | |
| Phylogeny | Optimization of matrix-assisted laser desorption ionization-time of flight mass spectrometry analysis for bacterial identification. | Khot PD, Couturier MR, Wilson A, Croft A, Fisher MA. | J Clin Microbiol | 10.1128/jcm.00626-12 | 2012 | |
| Propionibacterium, Corynebacterium, Mycobacterium and Lepra bacilli. | Barksdale L, Kim KS. | Acta Leprol | 1984 | |||
| Phylogeny | Encrustations on ureteral stents from patients without urinary tract infection reveal distinct urotypes and a low bacterial load. | Buhmann MT, Abt D, Nolte O, Neu TR, Strempel S, Albrich WC, Betschart P, Zumstein V, Neels A, Maniura-Weber K, Ren Q. | Microbiome | 10.1186/s40168-019-0674-x | 2019 | |
| Composition of symbiotic bacteria predicts survival in Panamanian golden frogs infected with a lethal fungus. | Becker MH, Walke JB, Cikanek S, Savage AE, Mattheus N, Santiago CN, Minbiole KP, Harris RN, Belden LK, Gratwicke B. | Proc Biol Sci | 10.1098/rspb.2014.2881 | 2015 | ||
| Metabolism | Core Fucosylation of Maternal Milk N-Glycan Evokes B Cell Activation by Selectively Promoting the l-Fucose Metabolism of Gut Bifidobacterium spp. and Lactobacillus spp. | Li M, Bai Y, Zhou J, Huang W, Yan J, Tao J, Fan Q, Liu Y, Mei D, Yan Q, Yuan J, Malard P, Wang Z, Gu J, Tanigchi N, Li W. | mBio | 10.1128/mbio.00128-19 | 2019 | |
| Molecular analysis of human forearm superficial skin bacterial biota. | Gao Z, Tseng CH, Pei Z, Blaser MJ. | Proc Natl Acad Sci U S A | 10.1073/pnas.0607077104 | 2007 | ||
| Pathogenicity | Topical Decolonization Does Not Eradicate the Skin Microbiota of Community-Dwelling or Hospitalized Adults. | Burnham CA, Hogan PG, Wallace MA, Deych E, Shannon W, Warren DK, Fritz SA. | Antimicrob Agents Chemother | 10.1128/aac.01289-16 | 2016 | |
| The Landscape Ecology and Microbiota of the Human Nose, Mouth, and Throat. | Proctor DM, Relman DA. | Cell Host Microbe | 10.1016/j.chom.2017.03.011 | 2017 | ||
| ANCHOR: a 16S rRNA gene amplicon pipeline for microbial analysis of multiple environmental samples. | Gonzalez E, Pitre FE, Brereton NJB. | Environ Microbiol | 10.1111/1462-2920.14632 | 2019 | ||
| Phylogeny | Characterization of Corynebacterium species in macaques. | Venezia J, Cassiday PK, Marini RP, Shen Z, Buckley EM, Peters Y, Taylor N, Dewhirst FE, Tondella ML, Fox JG. | J Med Microbiol | 10.1099/jmm.0.045377-0 | 2012 | |
| Phylogeny | Compositionally and functionally distinct sinus microbiota in chronic rhinosinusitis patients have immunological and clinically divergent consequences. | Cope EK, Goldberg AN, Pletcher SD, Lynch SV. | Microbiome | 10.1186/s40168-017-0266-6 | 2017 | |
| Enzymology | Dynamics of the surgical microbiota along the cardiothoracic surgery pathway. | Romano-Bertrand S, Frapier JM, Calvet B, Colson P, Albat B, Parer S, Jumas-Bilak E. | Front Microbiol | 10.3389/fmicb.2014.00787 | 2014 | |
| Phylogeny | Bacterial Communities Vary between Sinuses in Chronic Rhinosinusitis Patients. | Joss TV, Burke CM, Hudson BJ, Darling AE, Forer M, Alber DG, Charles IG, Stow NW. | Front Microbiol | 10.3389/fmicb.2015.01532 | 2015 | |
| Chemistry of Lipoquinones: Properties, Synthesis, and Membrane Location of Ubiquinones, Plastoquinones, and Menaquinones. | Braasch-Turi MM, Koehn JT, Crans DC. | Int J Mol Sci | 10.3390/ijms232112856 | 2022 | ||
| Phylogeny | New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract. | Escapa IF, Chen T, Huang Y, Gajare P, Dewhirst FE, Lemon KP. | mSystems | 10.1128/msystems.00187-18 | 2018 | |
| Pathogenicity | Bacteriology of moderate-to-severe diabetic foot infections and in vitro activity of antimicrobial agents. | Citron DM, Goldstein EJ, Merriam CV, Lipsky BA, Abramson MA. | J Clin Microbiol | 10.1128/jcm.00551-07 | 2007 | |
| Enzymology | Direct 16S rRNA gene sequencing from clinical specimens, with special focus on polybacterial samples and interpretation of mixed DNA chromatograms. | Kommedal O, Kvello K, Skjastad R, Langeland N, Wiker HG. | J Clin Microbiol | 10.1128/jcm.00973-09 | 2009 | |
| The role of the local microbial ecosystem in respiratory health and disease. | de Steenhuijsen Piters WA, Sanders EA, Bogaert D. | Philos Trans R Soc Lond B Biol Sci | 10.1098/rstb.2014.0294 | 2015 | ||
| Phylogeny | Molecular phylogenetic evidence for noninvasive zoonotic transmission of Staphylococcus intermedius from a canine pet to a human. | Tanner MA, Everett CL, Youvan DC. | J Clin Microbiol | 10.1128/jcm.38.4.1628-1631.2000 | 2000 | |
| Phylogeny | Morphological and phylogenetic characterizations of freshwater Thioploca species from Lake Biwa, Japan, and Lake Constance, Germany. | Kojima H, Teske A, Fukui M. | Appl Environ Microbiol | 10.1128/aem.69.1.390-398.2003 | 2003 | |
| Pathogenicity | Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient. | Schroder J, Maus I, Meyer K, Wordemann S, Blom J, Jaenicke S, Schneider J, Trost E, Tauch A. | BMC Genomics | 10.1186/1471-2164-13-141 | 2012 | |
| Phylogeny | Corynebacterium timonense sp. nov. and Corynebacterium massiliense sp. nov., isolated from human blood and human articular hip fluid. | Merhej V, Falsen E, Raoult D, Roux V. | Int J Syst Evol Microbiol | 10.1099/ijs.0.005827-0 | 2009 | |
| Phylogeny | Genomic diversity and phylogenetic relationships among lipid-requiring diphtheroids from humans and characterization of Corynebacterium macginleyi sp. nov. | Riegel P, Ruimy R, de Briel D, Prevost G, Jehl F, Christen R, Monteil H. | Int J Syst Bacteriol | 10.1099/00207713-45-1-128 | 1995 | |
| Enzymology | Description of Corynebacterium tuberculostearicum sp. nov., a leprosy-derived Corynebacterium. | Brown S, Laneelle MA, Asselineau J, Barksdale L. | Ann Microbiol (Paris) | 10.1016/s0769-2609(84)80093-9 | 1984 | |
| Phylogeny | Taxonomic characterization of nine strains isolated from clinical and environmental specimens, and proposal of Corynebacterium tuberculostearicum sp. nov. | Feurer C, Clermont D, Bimet F, Candrea A, Jackson M, Glaser P, Bizet C, Dauga C | Int J Syst Evol Microbiol | 10.1099/ijs.0.02907-0 | 2004 |
| #12195 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44922 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #23202 | Carole Feurer, Dominique Clermont, Francois Bimet, Adina Candréa, Mary Jackson, Philippe Glaser, Chantal Bizet, Catherine Dauga: Taxonomic characterization of nine strains isolated from clinical and environmental specimens, and proposal of Corynebacterium tuberculostearicum sp. nov.. IJSEM 54: 1055 - 1061 2004 ( DOI 10.1099/ijs.0.02907-0 , PubMed 15280269 ) |
| #33758 | ; Curators of the CIP; |
| #56770 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45418 |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68379 | Automatically annotated from API Coryne . |
| #68380 | Automatically annotated from API rID32A . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123677 | Collection of Institut Pasteur ; Curators of the CIP; CIP 107291 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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