Corynebacterium kutscheri DSM 20755 is a microaerophile, mesophilic, Gram-positive prokaryote that was isolated from lung abscess of mouse.
Gram-positive rod-shaped microaerophile mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Corynebacteriaceae |
| Genus Corynebacterium |
| Species Corynebacterium kutscheri |
| Full scientific name Corynebacterium kutscheri (Migula 1900) Bergey et al. 1925 (Approved Lists 1980) |
| Synonyms (1) |
| @ref: | 9062 |
| multimedia content: | DSM_20755.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_20755.jpg |
| caption: | Medium 535a 37°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Composition | |
|---|---|---|---|---|
| 18459 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | ||
| 18459 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | ||
| 9062 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 9062 | BHI MEDIUM WITH ADDITIONAL GLUCOSE (DSMZ Medium 215b) | Name: BHI MEDIUM WITH ADDITIONAL GLUCOSE (DSMZ Medium 215b) Composition: Brain heart infusion 37.0 g/l Glucose 5.0 g/l Distilled water | ||
| 40636 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | ||
| 120517 | CIP Medium 3 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 99.5 |
| 18459 | CompoundL-Aspartyl-L-N2-hydroxyaspartyl-D-cycloserine |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 9062 | A31 | A1gamma m-Dpm-direct |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 18459 | 22599 ChEBI | arabinose | - | ||
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 18459 | 62968 ChEBI | cellulose | - | ||
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68379 | 17634 ChEBI | D-glucose | + | fermentation | from API Coryne |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68368 | 17634 ChEBI | D-glucose | - | fermentation | from API 20E |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68368 | 16899 ChEBI | D-mannitol | - | fermentation | from API 20E |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68379 | 4853 ChEBI | esculin | + | hydrolysis | from API Coryne |
| 120517 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 18459 | 28757 ChEBI | fructose | - | ||
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 18459 | 17234 ChEBI | glucose | - | ||
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 120517 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68368 | 30849 ChEBI | L-arabinose | - | fermentation | from API 20E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68368 | 62345 ChEBI | L-rhamnose | + | fermentation | from API 20E |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 68379 | 17306 ChEBI | maltose | + | fermentation | from API Coryne |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 18459 | 29864 ChEBI | mannitol | - | ||
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 18459 | 17268 ChEBI | myo-inositol | - | ||
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | + | reduction | from API Coryne |
| 120517 | 17632 ChEBI | nitrate | + | reduction | |
| 120517 | 17632 ChEBI | nitrate | + | respiration | |
| 120517 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 18459 | 16634 ChEBI | raffinose | - | ||
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 18459 | 26546 ChEBI | rhamnose | - | ||
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 18459 | 17992 ChEBI | sucrose | - | ||
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68368 | 17992 ChEBI | sucrose | + | fermentation | from API 20E |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | + | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | + | hydrolysis | from API Coryne |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| 18459 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 120517 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68379 | alkaline phosphatase | - | 3.1.3.1 | from API Coryne |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 120517 | amylase | - | ||
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 120517 | beta-galactosidase | - | 3.2.1.23 | |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68379 | beta-glucosidase | + | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 120517 | caseinase | - | 3.4.21.50 | |
| 120517 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 120517 | DNase | - | ||
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 120517 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 120517 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68368 | gelatinase | - | from API 20E | |
| 120517 | lecithinase | - | ||
| 120517 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 120517 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 120517 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 120517 | oxidase | - | ||
| 120517 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API Coryne |
| 120517 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | + | 4.1.99.1 | from API 20E |
| 120517 | tween esterase | - | ||
| 120517 | urease | + | 3.5.1.5 | |
| 68379 | urease | + | 3.5.1.5 | from API Coryne |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | threonine metabolism | 90 | 9 of 10 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | ketogluconate metabolism | 87.5 | 7 of 8 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | palmitate biosynthesis | 86.36 | 19 of 22 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | propanol degradation | 85.71 | 6 of 7 | ||
| 66794 | phenylalanine metabolism | 84.62 | 11 of 13 | ||
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | ||
| 66794 | vitamin B12 metabolism | 82.35 | 28 of 34 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | lipoate biosynthesis | 80 | 4 of 5 | ||
| 66794 | starch degradation | 80 | 8 of 10 | ||
| 66794 | citric acid cycle | 78.57 | 11 of 14 | ||
| 66794 | heme metabolism | 78.57 | 11 of 14 | ||
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | biotin biosynthesis | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | isoleucine metabolism | 75 | 6 of 8 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 75 | 6 of 8 | ||
| 66794 | purine metabolism | 74.47 | 70 of 94 | ||
| 66794 | pyrimidine metabolism | 73.33 | 33 of 45 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | propionate fermentation | 70 | 7 of 10 | ||
| 66794 | oxidative phosphorylation | 67.03 | 61 of 91 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | serine metabolism | 66.67 | 6 of 9 | ||
| 66794 | NAD metabolism | 66.67 | 12 of 18 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | glutamate and glutamine metabolism | 64.29 | 18 of 28 | ||
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | ||
| 66794 | isoprenoid biosynthesis | 61.54 | 16 of 26 | ||
| 66794 | lipid metabolism | 61.29 | 19 of 31 | ||
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | ||
| 66794 | alanine metabolism | 58.62 | 17 of 29 | ||
| 66794 | degradation of sugar alcohols | 56.25 | 9 of 16 | ||
| 66794 | d-mannose degradation | 55.56 | 5 of 9 | ||
| 66794 | leucine metabolism | 53.85 | 7 of 13 | ||
| 66794 | urea cycle | 53.85 | 7 of 13 | ||
| 66794 | tryptophan metabolism | 52.63 | 20 of 38 | ||
| 66794 | non-pathway related | 52.63 | 20 of 38 | ||
| 66794 | histidine metabolism | 51.72 | 15 of 29 | ||
| 66794 | adipate degradation | 50 | 1 of 2 | ||
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | tetrahydrofolate metabolism | 50 | 7 of 14 | ||
| 66794 | cis-vaccenate biosynthesis | 50 | 1 of 2 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | glutathione metabolism | 50 | 7 of 14 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | proline metabolism | 45.45 | 5 of 11 | ||
| 66794 | lysine metabolism | 45.24 | 19 of 42 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | carotenoid biosynthesis | 40.91 | 9 of 22 | ||
| 66794 | methylglyoxal degradation | 40 | 2 of 5 | ||
| 66794 | Entner Doudoroff pathway | 40 | 4 of 10 | ||
| 66794 | cysteine metabolism | 38.89 | 7 of 18 | ||
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | ||
| 66794 | methionine metabolism | 38.46 | 10 of 26 | ||
| 66794 | vitamin B1 metabolism | 38.46 | 5 of 13 | ||
| 66794 | arginine metabolism | 37.5 | 9 of 24 | ||
| 66794 | tyrosine metabolism | 35.71 | 5 of 14 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 33.33 | 4 of 12 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | degradation of hexoses | 33.33 | 6 of 18 | ||
| 66794 | sulfate reduction | 30.77 | 4 of 13 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | degradation of pentoses | 28.57 | 8 of 28 | ||
| 66794 | reductive acetyl coenzyme A pathway | 28.57 | 2 of 7 | ||
| 66794 | ubiquinone biosynthesis | 28.57 | 2 of 7 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | ascorbate metabolism | 27.27 | 6 of 22 | ||
| 66794 | cholesterol biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | allantoin degradation | 22.22 | 2 of 9 |
| Metadata FA analysis | |||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||
| @ref | 48820 | ||||||||||||||||||||||||
|
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| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120517 | not determinedn.d. | - | - | - | - | + | - | - | - | - | +/- | + | + | + | - | - | - | - | - | - | - | +/- | - | - | + | + | + | - | + | - | - | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 52121_H02 assembly for Corynebacterium kutscheri NCTC11138 | complete | 35755 | 99.12 | ||||
| 66792 | ASM98083v1 assembly for Corynebacterium kutscheri DSM 20755 | complete | 35755 | 98.99 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Corynebacterium kutscheri gene for 16S rRNA | D37802 | 1338 | 35755 | ||
| 20218 | Corynebacterium kutscheri 16S ribosomal RNA gene, partial sequence | AY438060 | 419 | 35755 | ||
| 20218 | Corynebacterium kutscheri 16S rRNA, strain CIP 103423 | X81871 | 1413 | 35755 | ||
| 20218 | C.kutscheri 16S ribosomal DNA | X82063 | 1331 | 35755 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.50 | no |
| 125439 | motility | BacteriaNetⓘ | no | 86.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 69.70 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.10 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 90.95 | yes |
| 125438 | aerobic | aerobicⓘ | no | 62.34 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 78.05 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.13 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 92.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | A Metabolome- and Metagenome-Wide Association Network Reveals Microbial Natural Products and Microbial Biotransformation Products from the Human Microbiota. | Cao L, Shcherbin E, Mohimani H. | mSystems | 10.1128/msystems.00387-19 | 2019 | |
| Rational Use of Danofloxacin for Treatment of Mycoplasma gallisepticum in Chickens Based on the Clinical Breakpoint and Lung Microbiota Shift. | Wang S, Huang A, Gu Y, Li J, Huang L, Wang X, Tao Y, Liu Z, Wu C, Yuan Z, Hao H. | Antibiotics (Basel) | 10.3390/antibiotics11030403 | 2022 | ||
| A bacterial genotoxin causes virus reactivation and genomic instability in Epstein-Barr virus infected epithelial cells pointing to a role of co-infection in viral oncogenesis. | Frisan T, Nagy N, Chioureas D, Terol M, Grasso F, Masucci MG. | Int J Cancer | 10.1002/ijc.31652 | 2019 | ||
| Phylogeny | Detection of Corynebacterium kutscheri in animal tissues by DNA-DNA hybridization. | Saltzgaber-Muller J, Stone BA. | J Clin Microbiol | 10.1128/jcm.24.5.759-763.1986 | 1986 | |
| Phylogeny | Rapid identification of Rhodococcus equi by a PCR assay targeting the choE gene. | Ladron N, Fernandez M, Aguero J, Gonzalez Zorn B, Vazquez-Boland JA, Navas J. | J Clin Microbiol | 10.1128/jcm.41.7.3241-3245.2003 | 2003 | |
| Phylogeny | Evaluation of API Coryne system for identifying coryneform bacteria. | Soto A, Zapardiel J, Soriano F. | J Clin Pathol | 10.1136/jcp.47.8.756 | 1994 | |
| Enzymology | PCR detection and quantitation of predominant anaerobic bacteria in human and animal fecal samples. | Wang RF, Cao WW, Cerniglia CE. | Appl Environ Microbiol | 10.1128/aem.62.4.1242-1247.1996 | 1996 | |
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| Improved Detection of Murine Pathogens Using Sentinel-Free Media Compared to Live Animal Sampling. | Woolsey JM, Bonica J, Godbey S, Washington IM. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-25-070 | 2025 | ||
| Molecular characterization of antibiotic resistance in bacteria from daycare centres in Ile-Ife, Nigeria. | Wilkie ED, Alao JO, Thonda OA, Oluduro AO. | JAC Antimicrob Resist | 10.1093/jacamr/dlae213 | 2025 | ||
| Microbiota does not influence tumor development in two models of heritable cancer. | Spring J, Gurbuxani S, Golovkina T. | mBio | 10.1128/mbio.03866-24 | 2025 | ||
| Evaluation of Direct Colony Sampling Compared with Sentinel-Free Soiled Bedding Testing for Murine Quarantine Programs. | Luchins KR, Holliday B, Rehman F, Bowers CJ, Ostdiek AM, Langan GP, Felgenhauer JL. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-25-099 | 2025 | ||
| The mysterious case of missing lymphocytes: a cautionary tale of interinstitutional variability in outcomes of lung dissociation protocols. | Harlow OS, Ravi VR, Ke F, Sanders NL, Armstrong E, Mizgerd JP, Shenoy AT. | Am J Physiol Lung Cell Mol Physiol | 10.1152/ajplung.00323.2024 | 2025 | ||
| Bacterial isolates from drinking water river sources exhibit multi-drug resistant trait. | Popoola BM, Ogwerel JP, Oladipo OG. | Environ Monit Assess | 10.1007/s10661-024-13117-9 | 2024 | ||
| Transcriptome | Performance of three multiplex real-time PCR assays for simultaneous detection of 12 infectious pathogens in mice affected with respiratory and digestive diseases. | Wang HY, Ahn J, Lee J, Kang SC, Kim H. | Front Vet Sci | 10.3389/fvets.2024.1421427 | 2024 | |
| Studies of C57BL/6J Mice Deficient in Receptors for IFNalpha/beta and IFNgamma as a Model for EV-D68 Acute Flaccid Myelitis | Watarastaporn T, Song W, Glenn J, Ooi Y, Carette J, Nagamine C. | Comp Med | 2024 | |||
| Pathologic copulatory lock in a genetically engineered laboratory mouse breeding pair. | Leung G, Ricart-Arbona R, Monette S, Lipman NS. | Lab Anim | 10.1177/00236772231168185 | 2023 | ||
| Evaluation of Serum L-FABP as a Biomarker and Hepatoprotective Effect of L-FABP Using Wild-Type and Human L-FABP Chromosome Transgenic Mice. | Ohata K, Ryu K, Uno K, Teoh SH, Sugaya T, Kamijo-Ikemori A, Suzuki-Kemuriyama N, Miyajima K. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-25-003 | 2025 | ||
| Gavage-Needle Voluntary Consumption Administration of a Dose-Specific Measure to Mice (Mus musculus) | Punger E, Norris S, Stevens S, Santos K, Christy A. | J Am Assoc Lab Anim Sci | 2025 | |||
| Effect of Cage Change Frequency on Perinatal Mortality in C57BL/6J Mice. | Wharton KN, Walsh C, Bauer-Pisani TJ, Smith PC, Wilson SR. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-23-000055 | 2024 | ||
| Significance of Hemorheological Tests During Mycoplasma Pulmonis Infection in Laboratory Rats. | Deak A, Bedocs-Barath B, Varga A, Matrai AA, Bacskai T, Deak-Pocsai K, Nemeth N. | Animals (Basel) | 10.3390/ani15040563 | 2025 | ||
| Analysis of Individually Ventilated Cage (IVC) Microenvironments During 21-d Cage Change Frequency for Mice Using Two Different Bedding Types. | Felgenhauer JL, Copio JN, Suri AM, Turcios R, Ostdiek AM, Langan GP, Luchins KR. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-101 | 2025 | ||
| A Prospective Assessment of the Etiology of Murine Dystocia. | Cheleuitte-Nieves C, Ritter A, Palillo MB, Miranda IC, Carrasco SE, Monette S, Atmane MI, Lipman NS. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-090 | 2025 | ||
| Multiple Antimicrobial Resistance and Heavy Metal Tolerance of Biofilm-Producing Bacteria Isolated from Dairy and Non-Dairy Food Products. | Ejaz H, Junaid K, Yasmeen H, Naseer A, Alam H, Younas S, Qamar MU, Abdalla AE, Abosalif KOA, Ahmad N, Bukhari SNA. | Foods | 10.3390/foods11182728 | 2022 | ||
| Bacterial species to be considered in quality assurance of mice and rats. | Hansen AK, Nielsen DS, Krych L, Hansen CHF. | Lab Anim | 10.1177/0023677219834324 | 2019 | ||
| Administration of a bacterial lysate to the airway compartment is sufficient to inhibit allergen-induced lung eosinophilia in germ-free mice. | Michael AN, Pivniouk O, Ezeh PC, Banskar S, Hahn S, DeVries A, O'Connell K, Pivniouk V, Vercelli D. | J Leukoc Biol | 10.1093/jleuko/qiae047 | 2024 | ||
| Identification and Treatment of Fur Mites (Radfordia lemnina) in California Deer Mice (Peromyscus californicus) Using Selamectin. | Capria VM, Freed CL. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-055 | 2024 | ||
| Strain-resolved metagenomic analysis and qPCR validation suggest Clostridium cuniculi is the etiologic agent for infectious diarrhea in severely immunodeficient mice. | Barouch-Bentov R, Merrill BD, Reineking W, Moorhead R, Herberg de Alonso F, Fazel M, Uzal FA, Felt SA, Sonnenburg JL, Casey KM, Nagamine CM. | J Vet Diagn Invest | 10.1177/10406387251378688 | 2025 | ||
| Characterization of Effect of Enterovirus D68 in 129/Sv Mice Deficient in IFN-alpha/beta and/or IFN-gamma Receptors. | Song W, Watarastaporn T, Ooi YS, Nguyen K, Glenn JS, Carette JE, Casey KM, Nagamine CM. | Comp Med | 10.30802/aalas-cm-24-044 | 2024 | ||
| Evaluation of a Novel Battery-Operated Tumbler Device for Use in the Detection of Mouse Pathogens for Rodent Health Monitoring. | Sidhu HK, Perkins CL, Henderson KS, Hibl BM, Nouer SS, Tolley EA, Hamilton DJ. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-23-000053 | 2024 | ||
| Effects of Intermittent Harem Mating on Parturition-induced Stress and Success Rate of Weaning in C57BL/6JNarl Mice. | Chang TK, Wang CH, Lin TY, Su YC. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-000003 | 2024 | ||
| Identification of Mycoplasma Species in Cattle Associated with Bovine Respiratory Disease Mortality. | Carella E, Messana E, Mugetti D, Biasibetti E, Pezzolato M, Peletto S, Begovoeva M, Rossi F. | Microorganisms | 10.3390/microorganisms12112340 | 2024 | ||
| The Impact of Athymic Nude Mouse Stock and Colony Source on the Severity of Corynebacterium-Associated Hyperkeratosis. | Michelson A, Cheleuitte-Nieves C, Miranda IC, Ricart Arbona R, Dobtsis I, Wipf J, Lipman NS. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-100 | 2025 | ||
| Cecal microbiome transplantation without antibiotic preconditioning standardizes murine microbiomes. | Howard-Stone R, Gerwin P, Capunitan D, Driscoll M, Jackson E, Tran TDB, Mandoiu I, Oziolor E. | Front Microbiol | 10.3389/fmicb.2025.1632210 | 2025 | ||
| Intranasal Administration of a Polymeric Biodegradable Film to C57BL/6 Mice. | Balafas EG, Papakyriakopoulou PI, Kostomitsopoulos NG, Valsami GN. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000091 | 2023 | ||
| Armenian Hamsters (Nothocricetulus migratorius): A New Host Susceptible to Corynebacterium bovis Infection and Disease. | Cheleuitte-Nieves C, Miranda IC, Michelson A, Walton K, Geist GE, Nickerson K, Wipf JR, Carrasco SE, Monette S, Mammone R, Lipman NS. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-25-054 | 2025 | ||
| Enzymology | Epidemiological study of common diseases and their risk factors in camels in South Punjab, Pakistan. | Durrani AZ, Bashir Z, Rasheed I, Sarwar NU. | Microb Pathog | 10.1016/j.micpath.2017.04.011 | 2017 | |
| Investigating the Effect of Enterally Administered Capromorelin on Body Weight in Mice (Mus musculus). | Punger EM, Norris SLW, Stevens SC, Santos KH, Christy AC. | Comp Med | 10.30802/aalas-cm-24-031 | 2024 | ||
| Failure of colonization following gut microbiota transfer exacerbates DSS-induced colitis. | Gustafson KL, Rodriguez TR, McAdams ZL, Coghill LM, Ericsson AC, Franklin CL. | Gut Microbes | 10.1080/19490976.2024.2447815 | 2025 | ||
| Assessing Reuse of Hypodermic Needles in Mice by means of Digital Imaging, Photomicrography, Bacterial Culture, Analysis of Nest Building, and Animal Vocalization. | Bennett TE, Rizzo J, Yang S, Rosfjord E. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000094 | 2023 | ||
| Hypochlorous acid as an antiseptic in the care of patients with suspected COVID-19 infection. | Gessa Sorroche M, Relimpio Lopez I, Garcia-Delpech S, Benitez Del Castillo JM. | Arch Soc Esp Oftalmol (Engl Ed) | 10.1016/j.oftale.2021.01.010 | 2022 | ||
| Immunological biomarkers associated with survival in a cohort of Argentinian patients with common variable immunodeficiency. | Kahn A, Luque G, Cuestas E, Basquiera A, Ricchi B, Schmitz-Abe K, Charbonnier LM, Benamar M, Motrich RD, Chatila TA, Rivero VE. | J Allergy Clin Immunol Glob | 10.1016/j.jacig.2024.100311 | 2024 | ||
| Evaluation of Sentinel-Free Soiled Bedding as a Replacement for Direct Sampling in PCR Detection of Rodent Pathogens during Quarantine. | Feinberg A, Nickerson KP, Woods CL, Reimer D, Henderson KS, Andersen RP, Singh B. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-25-028 | 2025 | ||
| Infrared Thermography for Temperature Measurement in Adult Female C57BL/6NCrl Mice: A Comparison with Rectal Probe and Subcutaneous Transponder. | Fiebig K, Jourdan T, Kock M, Krehl K, Merle R, Thone-Reineke C. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-23-000114 | 2025 | ||
| Comparative Pharmacokinetics and Injection Site Histopathology in Nude Mice Treated with Long-acting Buprenorphine Formulations. | Illario JA, Osborn KG, Garcia AV, Sepulveda YJ, Momper JD, Kiel JW, Kirihennedige AS, Sun SA, Richter PJ. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000102 | 2023 | ||
| Assessment of Antimicrobial Therapy in Eradicating Chlamydia muridarum in Research Mice: Immune Status and Its Impact on Outcomes. | Palillo MB, Carrasco SE, Mishkin N, Palillo JA, Lynch DB, Lawton S, Aydin M, Mourino A, Lipman NS, Ricart Arbona RJ. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-069 | 2025 | ||
| Examining Intercage Transmission of Chlamydia muridarum: Impact of Barrier Husbandry and Cage Sanitization. | Palillo MB, Mishkin N, Aydin M, Mourino A, Ricart Arbona RJ, Lipman NS. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-043 | 2024 | ||
| Induction of Endometriosis in a Menstruating Mouse Model (Mus musculus): A Translational Animal Disease Model. | Howe CA, Cote JJ, Stoos CT, Hallgren JJ, Bredehoeft MR, Gelineau-van Waes JB. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-160 | 2025 | ||
| Effects of Supplemental Diet during Breeding on Fertility, Litter Size, Survival Rate, and Weaning Weight in Mice (Mus musculus). | Wong RK, Carriero SJ, Wadsworth BC, Raiciulescu S, Field AE, Cadieux CL. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-23-000128 | 2024 | ||
| Use of a Low-calorie Flavored Gel to Facilitate Oral Self-administration of Analgesics in Mice. | Riddell DL, Hyndman TH, Bowden RS, Musk GC. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000039 | 2023 | ||
| Phylogenomic Reappraisal of Fatty Acid Biosynthesis, Mycolic Acid Biosynthesis and Clinical Relevance Among Members of the Genus Corynebacterium. | Dover LG, Thompson AR, Sutcliffe IC, Sangal V. | Front Microbiol | 10.3389/fmicb.2021.802532 | 2021 | ||
| Genetics | Whole genome sequence of petroleum hydrocarbon degrading novel strain Microbacter sp. EMBS2025 isolated from Chilika Lake, Odisha, India. | Nayarisseri A, Sharma K, Khan A, Swami R, Chaudhary R, Sharma J, Kaur N, Kharate J, Rathore V, Prajapati L, Bandaru S, Junior FJBM, Scotti MT, Scotti L. | Sci Rep | 10.1038/s41598-025-13545-8 | 2025 | |
| Phylogeny | Light Cycle Phase Effects on Behavioral Responses to Stress Exposure in Rats. | Brown CE, Borrell AC, DeMar JC, Almarode CJ, Naderi AO, Han AJ, Taylor RM, Lowery-Gionta EG. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-24-103 | 2025 | |
| Chlamydia muridarum Associated Pulmonary and Urogenital Disease and Pathology in a Colony of Enzootically Infected Il12rb2 Deficient and Stat1 Knockout Mice. | Mishkin N, Miranda IC, Carrasco SE, Cheleuitte-Nieves C, Arbona RRJ, Wingert C, Sun JC, Lipman NS. | Comp Med | 10.30802/aalas-cm-24-000002 | 2024 | ||
| Microbial inoculants - fostering sustainability in groundnut production. | Krishnan KS, Rangasamy A, Arunan YE, Dananjeyan B, Subramanium T, Saminathan V. | Sci Prog | 10.1177/00368504251338943 | 2025 | ||
| Enzymology | Assessing the Biosecurity Risk of Footwear as a Fomite for Transmission of Adventitious Infectious Agents to Mice | Palillo M, Mishkin N, Atmane M, Palillo J, Carrasco S, Woods C, Henderson K, Lipman N, Ricart Arbona R. | J Am Assoc Lab Anim Sci | 2025 | ||
| Enzymology | Rapid identification of Klebsiella pneumoniae, Corynebacterium kutscheri, and Streptococcus pneumoniae using triplex polymerase chain reaction in rodents. | Jeong ES, Lee KS, Heo SH, Seo JH, Choi YK. | Exp Anim | 10.1538/expanim.62.35 | 2013 | |
| Electropenetrography with Alternating Current Reveals In Situ Changes of Aedes aegypti Probing Behaviors Associated with Dengue Virus Infection. | Jameson SB, Vaughan LD, de Verges JE, Carter BH, Dobek GL, Londono-Renteria B, Wesson DM. | Comp Med | 10.30802/aalas-cm-24-030 | 2024 | ||
| Aortic and mitral valve surgery for infective endocarditis with reconstruction of the intervalvular fibrous body: an analysis of clinical outcomes. | Jiang X, Liu J, Khan F, Tang R, Zhang Y, Gu T. | J Thorac Dis | 10.21037/jtd.2020.03.04 | 2020 | ||
| Carbon Dioxide, Oxygen, and Ammonia Levels in Mouse and Rat Disposable IVC Removed from Mechanical Ventilation. | Keenan RA, Rogers RN, Winn CB. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000028 | 2022 | ||
| Modulation of immune response by interleukin-10 in systemic Corynebacterium kutscheri infection in mice. | Jeong ES, Lee KS, Heo SH, Seo JH, Choi YK. | J Microbiol | 10.1007/s12275-012-1298-z | 2012 | ||
| Effect size of delayed freezing, diurnal variation, and hindgut location on the mouse fecal microbiome. | Gustafson KL, McAdams ZL, Russell AL, Dorfmeyer RA, Turner GM, Ericsson AC. | iScience | 10.1016/j.isci.2024.109090 | 2024 | ||
| Isolation and Characterization of a Novel Alpha-Hemolytic Streptococcus spp. from the Oral Cavity and Blood of Septicemic Periparturient Immunodeficient Mice. | Funk A, Jia Q, Janke L, Crawford A, Iverson A, Rosch J, Emmons J, Savage C, Glasgow H, Hayden R, Margolis E, Pisharath H. | Comp Med | 10.30802/aalas-cm-23-000020 | 2023 | ||
| [Hypochlorous acid as an antiseptic in the care of patients with suspected COVID-19 infection]. | Gessa-Sorroche M, Relimpio-Lopez I, Garcia-Delpech S, Benitez-Del-Castillo JM. | Arch Soc Esp Oftalmol | 10.1016/j.oftal.2021.01.012 | 2022 | ||
| Effects of Housing Density on Reproductive Performance, Intracage Ammonia, and Welfare of Mice Continuously Housed as Breeders in Standard Mouse and Rat Caging. | Cho E, Walsh CA, D'Angelo-Gavrish NM, Wilson SR, Cirillo PA, Smith PC. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000069 | 2023 | ||
| Preventing the Transmission of Murine Norovirus to Mice (Mus musculus) by Using Dry-heat Sterilization. | Lee JC, Bidot WA, Nunamaker EA. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-21-000138 | 2022 | ||
| Enzymology | Effect of biosurfactant and fertilizer on biodegradation of crude oil by marine isolates of Bacillus megaterium, Corynebacterium kutscheri and Pseudomonas aeruginosa. | Thavasi R, Jayalakshmi S, Banat IM. | Bioresour Technol | 10.1016/j.biortech.2010.08.099 | 2011 | |
| Effects of Extended Cage Component Sanitation Interval on the Microenvironment, Health, and Gastrointestinal Microbiome of Rats (Rattus norvegicus). | Taylor JZ, Fong DL, Habenicht LM, Fink MK, Leszczynski JK, Frank DN, Kofonow JM, Robertson CE, Nicklawsky AG, Schurr MJ, Manuel CA. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000113 | 2023 | ||
| The Use of Hypochlorous Acid, Test-and-removal, and Cross-fostering to Eradicate Mouse Pathogens in an Animal Facility. | Shih HY, Chen YC, Liao CF. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000115 | 2023 | ||
| Characterization of the Thermostable Biosurfactant Produced by Burkholderia thailandensis DSM 13276. | Gil CV, Rebocho AT, Esmail A, Sevrin C, Grandfils C, Torres CAV, Reis MAM, Freitas F. | Polymers (Basel) | 10.3390/polym14102088 | 2022 | ||
| Pharmacokinetics of Sustained-release and Extended-release Buprenorphine in Mice after Surgical Catheterization. | Saenz M, Bloom-Saldana EA, Synold T, Ermel RW, Fueger PT, Finlay JB. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000025 | 2022 | ||
| Standardized Complex Gut Microbiomes Influence Fetal Growth, Food Intake, and Adult Body Weight in Outbred Mice. | Cheatham CN, Gustafson KL, McAdams ZL, Turner GM, Dorfmeyer RA, Ericsson AC. | Microorganisms | 10.3390/microorganisms11020484 | 2023 | ||
| Chlamydia muridarum infection causes bronchointerstitial pneumonia in NOD.Cg-PrkdcscidIl2rgtm1Wjl/SzJ (NSG) mice. | St Jean SC, Ricart Arbona RJ, Mishkin N, Monette S, Wipf JRK, Henderson KS, Cheleuitte-Nieves C, Lipman NS, Carrasco SE. | Vet Pathol | 10.1177/03009858231183907 | 2024 | ||
| Cost Comparison of Rodent Soiled Bedding Sentinel and Exhaust Air Dust Health-Monitoring Programs. | Luchins KR, Bowers CJ, Mailhiot D, Theriault BR, Langan GP. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-20-000003 | 2020 | ||
| Role of IL-10 deficiency in pneumonia induced by Corynebacterium kutscheri in mice. | Jeong ES, Won YS, Kim HC, Cho MH, Choi YK. | J Microbiol Biotechnol | 10.4014/jmb.0807.436 | 2009 | ||
| Enzymology | Detection of Corynebacterium kutscheri in the faeces of subclinically infected mice. | Amao H, Moriguchi N, Komukai Y, Kawasumi H, Takahashi K, Sawada T. | Lab Anim | 10.1258/la.2007.06008e | 2008 | |
| Enzymology | Simultaneous serodetection of major rat infectious pathogens by a multiplex immunochromatographic assay. | Tosa N, Ishida T, Yoshimatsu K, Hayashimoto N, Shiokawa K, Takakura A, Arikawa J. | Exp Anim | 10.1538/expanim.20-0099 | 2021 | |
| Characterization of trehalolipid biosurfactant produced by the novel marine strain Rhodococcus sp. SP1d and its potential for environmental applications. | Andreolli M, Villanova V, Zanzoni S, D'Onofrio M, Vallini G, Secchi N, Lampis S. | Microb Cell Fact | 10.1186/s12934-023-02128-9 | 2023 | ||
| Multiplex Immunochromatographic Assay for Serologic Diagnosis of Major Infectious Diseases in Laboratory Mice. | Tosa N, Ishida T, Yoshimatsu K, Hayashimoto N, Shiokawa K, Takakura A, Arikawa J. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-19-000008 | 2019 | ||
| Preference of Escaped Mice for Live Capture or Glue Traps and Relevance to Pest Control Programs. | Schoenberger JM, Prendergast BJ, Luchins KR, Theriault BR, Langan GP. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000073 | 2023 | ||
| Using Filter Media and Soiled Bedding in Disposable Individually Ventilated Cages as a Refinement to Specific Pathogen-free Mouse Health Monitoring Programs. | Winn CB, Rogers RN, Keenan RA, Gerwin PM, Matthews KA, Ramirez JA, Bennett TE, Perkins CL, Henderson KS. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000013 | 2022 | ||
| Metabolism | Biosurfactant production by Corynebacterium kutscheri from waste motor lubricant oil and peanut oil cake. | Thavasi R, Jayalakshmi S, Balasubramanian T, Banat IM. | Lett Appl Microbiol | 10.1111/j.1472-765x.2007.02256.x | 2007 | |
| Pinna Edge Biopsy of 7 and 21 Day Old C57BL/6 Mice as a Method for Identification and Genotyping. | Chen DD, Molk DM, Palley LS, Jarrell DM. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-23-000022 | 2023 | ||
| Corneal Changes and Strategies to Improve Survival of Hypomorphic Collagen VII-Deficient Mice for the Study of Ocular Dystrophic Epidermolysis Bullosa. | Chen VM, Southwell K, Huynh E, Gavett S, Richey L, Esmail M. | Comp Med | 10.30802/aalas-cm-21-000063 | 2022 | ||
| Aversion to Desflurane and Isoflurane in Sprague-Dawley Rats (Rattus Norvegicus). | Frost K, Shah M, Leung VSY, Pang DSJ. | Animals (Basel) | 10.3390/ani10060950 | 2020 | ||
| Pathogenicity | Effect of weak acid hypochlorous solution on selected viruses and bacteria of laboratory rodents. | Taharaguchi M, Takimoto K, Zamoto-Niikura A, Yamada YK. | Exp Anim | 10.1538/expanim.63.141 | 2014 | |
| Microbiological assessment of maize ogi cofermented with pigeon pea. | Omemu AM, Okafor UI, Obadina AO, Bankole MO, Adeyeye SAO. | Food Sci Nutr | 10.1002/fsn3.651 | 2018 | ||
| An Incidence of Pseudopregnancy Associated with the Social Enrichment of Rabbits (Oryctolagus cuniculi). | Carter CL, Adams JK, Czarra JA, Coan PN. | J Am Assoc Lab Anim Sci | 2016 | |||
| Enzymology | Spontaneous Infection Caused by Streptococcus agalactiae in KK-Ay Mice. | Koga T, Aoki W, Fujii M, Satou K, Ikeda Y. | Comp Med | 2017 | ||
| Response to mechanical loading in rat Achilles tendon healing is influenced by the microbiome. | Dietrich-Zagonel F, Hammerman M, Eliasson P, Aspenberg P. | PLoS One | 10.1371/journal.pone.0229908 | 2020 | ||
| Effect of Housing Condition and Diet on the Gut Microbiota of Weanling Immunocompromised Mice. | Thurman CE, Klores MM, Wolfe AE, Poueymirou WT, Levee EM, Ericsson AC, Franklin CL, Reddyjarugu B. | Comp Med | 10.30802/aalas-cm-21-000015 | 2021 | ||
| Mouse resources at the RIKEN BioResource Research Center and the National BioResource Project core facility in Japan. | Mizuno-Iijima S, Nakashiba T, Ayabe S, Nakata H, Ike F, Hiraiwa N, Mochida K, Ogura A, Masuya H, Kawamoto S, Tamura M, Obata Y, Shiroishi T, Yoshiki A. | Mamm Genome | 10.1007/s00335-021-09916-x | 2022 | ||
| Pathogenicity | Chlamydia muridarum Causes Persistent Subclinical Infection and Elicits Innate and Adaptive Immune Responses in C57BL/6J, BALB/cJ, and J:ARC(S) Mice Following Exposure to Shedding Mice. | Mishkin N, Carrasco SE, Palillo M, Momtsios P, Woods C, Henderson KS, Longhini ALF, Otis C, Gardner R, Joseph AM, Sonnenberg GF, Palillo J, Arbona RJR, Lipman NS. | Comp Med | 10.30802/aalas-cm-24-057 | 2024 | |
| Enzymology | Corynebacterium kutscheri infection of skin and soft tissue following rat bite. | Holmes NE, Korman TM. | J Clin Microbiol | 10.1128/jcm.00607-07 | 2007 | |
| A refined method to monitor arousal from hibernation in the European hamster. | Markussen FAF, Melum VJ, Bothorel B, Hazlerigg DG, Simonneaux V, Wood SH. | BMC Vet Res | 10.1186/s12917-020-02723-7 | 2021 | ||
| Cutaneous and Pulmonary Mucormycosis in Rag1- and Il2rg-deficient Rats. | Sarfaty AE, Compton SR, Smith PC, Zeiss CJ. | Comp Med | 10.30802/aalas-cm-20-000015 | 2020 | ||
| The Effect of Noise, Vibration, and Light Disturbances from Daily Health Checks on Breeding Performance, Nest Building, and Corticosterone in Mice. | Clancy BM, Theriault BR, Turcios R, Langan GP, Luchins KR. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-23-000002 | 2023 | ||
| Intrahepatic Injection of Sodium Pentobarbital as an Alternative to Intraperitoneal Injection for the Euthanasia of Rats (Rattus norvegicus). | Laferriere CA, Leung VS, Rousseau-Blass F, Lalonde-Robert V, Pang DS. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-21-000094 | 2022 | ||
| Physiologic and Behavioral Effects in Mice Anesthetized with Isoflurane in a Red-tinted or a Traditional Translucent Chamber. | McKinney MM, Dupont WD, Corson KJ, Wallace JM, Jones CP. | J Am Assoc Lab Anim Sci | 10.30802/aalas-jaalas-22-000011 | 2022 | ||
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| Association of complement C3 and interleukin-1 with foot infections in diabetic patients. | Kheiralla ZM, Maklad SS, Ashour SM, El-Sayed Moustafa E. | Eur J Microbiol Immunol (Bp) | 10.1556/eujmi.2.2012.3.8 | 2012 | ||
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| Enzymology | Characterization of the bacterial gut microbiota of piglets suffering from new neonatal porcine diarrhoea. | Hermann-Bank ML, Skovgaard K, Stockmarr A, Strube ML, Larsen N, Kongsted H, Ingerslev HC, Molbak L, Boye M. | BMC Vet Res | 10.1186/s12917-015-0419-4 | 2015 | |
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| Postsurgical food and water consumption, fecal corticosterone metabolites, and behavior assessment as noninvasive measures of pain in vasectomized BALB/c mice. | Jacobsen KR, Kalliokoski O, Teilmann AC, Hau J, Abelson KS. | J Am Assoc Lab Anim Sci | 2012 | |||
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| Long-Term Provision of Environmental Resources Alters Behavior but not Physiology or Neuroanatomy of Male and Female BALB/c and C57BL/6 Mice. | Clipperton-Allen AE, Ingrao JC, Ruggiero L, Batista L, Ovari J, Hammermueller J, Armstrong JN, Bienzle D, Choleris E, Turner PV. | J Am Assoc Lab Anim Sci | 2015 | |||
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| Metabolism | Galectin-3 Inhibits Galectin-8/Parkin-Mediated Ubiquitination of Group A Streptococcus. | Cheng YL, Wu YW, Kuo CF, Lu SL, Liu FT, Anderson R, Lin CF, Liu YL, Wang WY, Chen YD, Zheng PX, Wu JJ, Lin YS. | mBio | 10.1128/mbio.00899-17 | 2017 | |
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| Creation and preliminary characterization of a Tp53 knockout rat. | McCoy A, Besch-Williford CL, Franklin CL, Weinstein EJ, Cui X. | Dis Model Mech | 10.1242/dmm.009704 | 2013 | ||
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| Effects of breeding environments on generation and activation of autoreactive B-1 cells in anti-red blood cell autoantibody transgenic mice. | Murakami M, Nakajima K, Yamazaki K, Muraguchi T, Serikawa T, Honjo T. | J Exp Med | 10.1084/jem.185.4.791 | 1997 | ||
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| Utility of recycled bedding for laboratory rodents. | Miyamoto T, Li Z, Kibushi T, Okano S, Yamasaki N, Kasai N. | J Am Assoc Lab Anim Sci | 2009 | |||
| Metabolism | Flaky tail mouse denotes human atopic dermatitis in the steady state and by topical application with Dermatophagoides pteronyssinus extract. | Moniaga CS, Egawa G, Kawasaki H, Hara-Chikuma M, Honda T, Tanizaki H, Nakajima S, Otsuka A, Matsuoka H, Kubo A, Sakabe J, Tokura Y, Miyachi Y, Amagai M, Kabashima K. | Am J Pathol | 10.2353/ajpath.2010.090957 | 2010 | |
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| Treatment and eradication of murine fur mites: I. Toxicologic evaluation of ivermectin-compounded feed. | Ricart Arbona RJ, Lipman NS, Riedel ER, Wolf FR. | J Am Assoc Lab Anim Sci | 2010 | |||
| Primary follicular dystrophy with scarring dermatitis in C57BL/6 mouse substrains resembles central centrifugal cicatricial alopecia in humans. | Sundberg JP, Taylor D, Lorch G, Miller J, Silva KA, Sundberg BA, Roopenian D, Sperling L, Ong D, King LE, Everts H. | Vet Pathol | 10.1177/0300985810379431 | 2011 | ||
| Metabolism | Lymphocyte phenotypes in wild-caught rats suggest potential mechanisms underlying increased immune sensitivity in post-industrial environments. | Trama AM, Holzknecht ZE, Thomas AD, Su KY, Lee SM, Foltz EE, Perkins SE, Lin SS, Parker W. | Cell Mol Immunol | 10.1038/cmi.2011.61 | 2012 | |
| Enzymology | Suboptimal ability of dirty-bedding sentinels to detect Spironucleus muris in a colony of mice with genetic manipulations of the adaptive immune system. | Perdue KA, Copeland MK, Karjala Z, Cheng LI, Ward JM, Elkins WR. | J Am Assoc Lab Anim Sci | 2008 | ||
| Pulmonary inflammation and airway hyperresponsiveness in a mouse model of asthma complicated by acid aspiration. | Nemzek JA, Kim J. | Comp Med | 2009 | |||
| Pathogenicity | Dietary soy may not confound acute experimental stroke infarct volume outcomes in ovariectomized female rats. | Prongay KD, Lewis AD, Hurn PD, Murphy SJ. | Lab Anim | 10.1258/la.2009.009031 | 2010 | |
| TNFR2 Deficiency Acts in Concert with Gut Microbiota To Precipitate Spontaneous Sex-Biased Central Nervous System Demyelinating Autoimmune Disease. | Miller PG, Bonn MB, Franklin CL, Ericsson AC, McKarns SC. | J Immunol | 10.4049/jimmunol.1501664 | 2015 | ||
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| Phylogeny | Evaluation of the RapID CB plus system for identification of coryneform bacteria and Listeria spp. | Funke G, Peters K, Aravena-Roman M. | J Clin Microbiol | 10.1128/jcm.36.9.2439-2442.1998 | 1998 | |
| Metabolism | Gastrin is an essential cofactor for helicobacter-associated gastric corpus carcinogenesis in C57BL/6 mice. | Takaishi S, Tu S, Dubeykovskaya ZA, Whary MT, Muthupalani S, Rickman BH, Rogers AB, Lertkowit N, Varro A, Fox JG, Wang TC. | Am J Pathol | 10.2353/ajpath.2009.081165 | 2009 | |
| Helicobacter pylori infection induces duodenitis and superficial duodenal ulcer in Mongolian gerbils. | Ohkusa T, Okayasu I, Miwa H, Ohtaka K, Endo S, Sato N. | Gut | 10.1136/gut.52.6.797 | 2003 | ||
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| Phylogeny | Characterization of United Kingdom isolates of Corynebacterium pseudotuberculosis using pulsed-field gel electrophoresis. | Connor KM, Quirie MM, Baird G, Donachie W. | J Clin Microbiol | 10.1128/jcm.38.7.2633-2637.2000 | 2000 | |
| Biotechnology | Effects of domestication on the gut microbiota parallel those of human industrialization. | Reese AT, Chadaideh KS, Diggins CE, Schell LD, Beckel M, Callahan P, Ryan R, Emery Thompson M, Carmody RN. | Elife | 10.7554/elife.60197 | 2021 | |
| Metabolism | Reversible control by vitamin D of granulocytes and bacteria in the lungs of mice: an ovalbumin-induced model of allergic airway disease. | Gorman S, Weeden CE, Tan DH, Scott NM, Hart J, Foong RE, Mok D, Stephens N, Zosky G, Hart PH. | PLoS One | 10.1371/journal.pone.0067823 | 2013 | |
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| Genetics | Genome-Based Taxonomic Classification of the Phylum Actinobacteria. | Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M. | Front Microbiol | 10.3389/fmicb.2018.02007 | 2018 | |
| Genetics | Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low G+C Content of Chromosomal DNA. | Ruckert C, Albersmeier A, Winkler A, Tauch A | Genome Announc | 10.1128/genomeA.00571-15 | 2015 | |
| Phylogeny | Corynebacterium alimapuense sp. nov., an obligate marine actinomycete isolated from sediment of Valparaiso bay, Chile. | Claverias F, Gonzales-Siles L, Salva-Serra F, Inganas E, Molin K, Cumsille A, Undabarrena A, Couve E, Moore ERB, Tindall BJ, Gomila M, Camara B | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003237 | 2019 |
| #9062 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20755 |
| #18459 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #40636 | ; Curators of the CIP; |
| #48820 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 27535 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68379 | Automatically annotated from API Coryne . |
| #68382 | Automatically annotated from API zym . |
| #120517 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103423 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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