Corynebacterium callunae B-2244 | Type strain | CCUG 28793, CIP 104277, DSM 20147, ATCC 15991, CCM 7707, NCIB 10338, NRRL B-2244, JCM 9489, BCRC 12128, CECT 4015, HAMBI 2053, IFO 15359, IMSNU 21209, KCTC 1444, NBRC 15359, NCIMB 10338 | BacDiveID:3083

Strain identifier

BacDive ID: 3083

Type strain:

Species: Corynebacterium callunae

Strain Designation: B-2244

Culture col. no.: CCUG 28793, CIP 104277, DSM 20147, ATCC 15991, CCM 7707, NCIB 10338, NRRL B-2244, JCM 9489, BCRC 12128, CECT 4015, HAMBI 2053, IFO 15359, IMSNU 21209, KCTC 1444, NBRC 15359, NCIMB 10338

Strain history: CIP <- 1994, R. Ruimy, CNRS, Villefranche/Mer, France <- ATCC <- NRRL: strain B-2244 <- Int. Mineral and Chemical Corp.

NCBI tax ID(s): 1121353 (strain), 1721 (species)

SI-ID 36612

ATCC 15991, NRRL B-2244, IFO 15359, JCM 9489, CCUG 28793, CIP 104277, DSM 20147, NCIB 10338, CCRC 12128, NCIMB 10338, IMET11079, NCFB 10338, CECT 4015, KCTC 1444, NBRC 15359, HAMBI 2053, BCRC 12128

Special Collections

Section

Corynebacterium callunae B-2244 is an obligate aerobe, Gram-positive bacterium that produces amino acids.

amino acid production
Gram-positive
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Corynebacteriaceae*
	Genus	*Corynebacterium*
	Species	**Corynebacterium callunae**
	Full Scientific Name (LPSN)	Corynebacterium callunae (Lee and Good 1963) Yamada and Komagata 1972 (Approved Lists 1980)

Synonym

"Corynebacterium callunae"

Information on morphological and physiological properties Morphology

[Ref.: #117107]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %91.144

[Ref.: #117107]	Cell shape	rod-shaped

[Ref.: #18425]	Colony color	Ivory (1014)
[Ref.: #18425]	Incubation period	10-14 days
[Ref.: #18425]	Cultivation medium used	ISP 2

[Ref.: #18425]	Colony color	Light ivory (1015)
[Ref.: #18425]	Incubation period	10-14 days
[Ref.: #18425]	Cultivation medium used	ISP 3

[Ref.: #18425]	Multicellular complex forming ability	no
[Ref.: #18425]	Medium Name (multicellularity)	ISP 2

[Ref.: #18425]	Multicellular complex forming ability	no
[Ref.: #18425]	Medium Name (multicellularity)	ISP 3

Multimedia content

Caption:

Medium 693 28°C

Intellectual property rights:

© Leibniz-Institut DSMZ

Information on culture and growth conditions Culture and growth conditions

Culture medium

ISP 2

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

ISP 3

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

MEDIUM 3 - Columbia agar

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

[Ref.: #117107]

Culture medium

CIP Medium 3

[Ref.: #117107]

Culture medium growth

[Ref.: #117107]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #8571]			growth	28 °C
[Ref.: #18425]			optimum	28 °C
[Ref.: #34925]			growth	30 °C
[Ref.: #67770]			growth	30 °C
[Ref.: #117107]			growth	30-41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #117107]

Oxygen tolerance

obligate aerobe

Ability of spore formation

no Confidence in %100

[Ref.: #8571]	Name of produced compound	L glutamic acid
[Ref.: #20216]	Name of produced compound	L-glutamic acid

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #18425]		NaCl		maximum	2.5	%

[Ref.: #8571]	Murein short key	A31
[Ref.: #8571]	Murein types	A1gamma m-Dpm-direct

Observation

quinones: MK-9(H₂)

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]		adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		arbutin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68369]		arginine ChEBI	-	hydrolysis	* from API 20NE, API 20E
[Ref.: #68371]		cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #18425]		cellulose ChEBI	-
[Ref.: #68368]		citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #68371]		D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-arabitol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68369]		D-glucose ChEBI	-	fermentation	* from API 20NE, API Coryne
[Ref.: #68371]		D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]		D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]		D-mannose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]		D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]		D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]		D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]		decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68369]		esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68379]		esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #18425]		fructose ChEBI	-
[Ref.: #68371]		galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]		gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #68369]		gelatin ChEBI	-	hydrolysis	* from API 20NE, API 20E
[Ref.: #68371]		gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #18425]		glucose ChEBI	+
[Ref.: #68371]		glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]		glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]		inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]		lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68368]		lysine ChEBI	-	degradation	* from API 20E
[Ref.: #68369]		maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]		maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #18425]		mannitol ChEBI	-
[Ref.: #68371]		melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		nitrate ChEBI	-	reduction	* from API 20NE, API Coryne
[Ref.: #68368]		ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #68371]		Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #18425]		raffinose ChEBI	-
[Ref.: #68371]		raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #18425]		rhamnose ChEBI	-
[Ref.: #68371]		ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		salicin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]		starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #18425]		sucrose ChEBI	+
[Ref.: #68371]		sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]		sucrose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68369]		tryptophan ChEBI	-	energy source	* from API 20NE, API 20E
[Ref.: #68371]		turanose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68368]		urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68369]		urea ChEBI	-	hydrolysis	* from API 20NE, API Coryne
[Ref.: #68371]		xylitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #18425]		xylose ChEBI	-
		Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #117107]		indole ChEBI	no
[Ref.: #67770]		L-glutamate ChEBI	yes
[Ref.: #68368]		acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]		hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68369]		indole ChEBI	no	* from API 20NE, API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68369]		indole ChEBI		-	* from API 20NE, API 20E

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #68379]		alkaline phosphatase	+	3.1.3.1	* from API Coryne
[Ref.: #68382]		alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]		alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]		alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]		alpha-glucosidase	-	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]		alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #117107]		amylase	+
[Ref.: #68369]		arginine dihydrolase	-	3.5.3.6	* from API 20NE, API 20E
[Ref.: #117107]		beta-galactosidase	-	3.2.1.23
[Ref.: #68379]		beta-galactosidase	+	3.2.1.23	* from API Coryne
[Ref.: #68382]		beta-galactosidase	-	3.2.1.23	* from API zym, API 20E
[Ref.: #68369]		beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #68379]		beta-glucosidase	-	3.2.1.21	* from API Coryne
[Ref.: #68379]		beta-glucuronidase	+	3.2.1.31	* from API Coryne
[Ref.: #68382]		beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #117107]		catalase	+	1.11.1.6
[Ref.: #68382]		cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #117107]		DNase	-
[Ref.: #117107]		gelatinase	-
[Ref.: #68379]		gelatinase	+		* from API Coryne
[Ref.: #68369]		gelatinase	-		* from API 20NE, API 20E
[Ref.: #117107]		lecithinase	-
[Ref.: #68382]		leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68368]		lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]		N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API Coryne
[Ref.: #68368]		ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #117107]		oxidase	-
[Ref.: #68379]		pyrazinamidase	+	3.5.1.B15	* from API Coryne
[Ref.: #68379]		pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]		trypsin	-	3.4.21.4	* from API zym
[Ref.: #68368]		tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #117107]		urease	-	3.5.1.5
[Ref.: #68368]		urease	+	3.5.1.5	* from API 20E
[Ref.: #68379]		urease	-	3.5.1.5	* from API Coryne, API 20NE
		Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

Fatty acid	Percentage	ECL
C18:1 ω9c	30.2	17.769
C16:0	26.6	16
C17:1 ω9c	17.6	16.773
Unidentified	14.5
C17:0	5	17
C14:0	2.7	14
C18:2 ω6,9c/C18:0 ANTE	1.9	17.724
C18:0	1.3	18

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18425]	20	-	-	-	-	-	-	+	-	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #8571]	25118	-	-	-	-	-	+	-	-	+	-	+	+/-	-	+	+	-	-	+/-	+	+/-	not determinedn.d.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #117107]	9556	not determinedn.d.	-	-	-	-	+	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	+	+	+	-	+	-	-	+	+/-	-	-	-	-	-	-	-	+	-	-	-	-	+	-	+/-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #117107]	621	not determinedn.d.	+	+	-	-	+	-	-	+	-	+	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	+	+	-	-	+	+	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #18425]	106	-	+	+	+	+	+	-	-	-	-	+	not determinedn.d.	-	-	-	-	-	-	+	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18425]	135	not determinedn.d.	+	+	+	+	+	+	-	-	-	-	+	-	-	-	-	+	-	-	-
[Ref.: #8571]	14249	-	-	+/-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #117107]	7872	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	+	-	-	-

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18425]	Biosafety level	1	German classification
[Ref.: #8571]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #117107]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Corynebacterium callunae 16S rRNA gene, strain NCFB 10338	X84251	1494	GenBank ENA	1721 tax ID
[Ref.: #8571]	C.callunae 16S ribosomal DNA	X82053	1322	GenBank ENA	1721 tax ID
[Ref.: #124043]	Corynebacterium callunae strain CCUG 28793 16S ribosomal RNA gene, partial sequence.	MN526954	470	GenBank ENA	1721 tax ID	*
[Ref.: #124043]	Corynebacterium callunae strain CCUG 28793 16S ribosomal RNA gene, partial sequence.	MN527272	470	GenBank ENA	1721 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Corynebacterium callunae DSM 20147	GCA_000420585	contig	GenBank ENA	1121353 tax ID
[Ref.: #66792]	Corynebacterium callunae DSM 20147	1121353.12	plasmid	PATRIC	1121353 tax ID	*
[Ref.: #66792]	Corynebacterium callunae DSM 20147	1121353.11	plasmid	PATRIC	1121353 tax ID	*
[Ref.: #66792]	Corynebacterium callunae DSM 20147	1121353.3	complete	PATRIC	1121353 tax ID	*
[Ref.: #66792]	Corynebacterium callunae DSM 20147	1121353.8	wgs	PATRIC	1121353 tax ID	*
[Ref.: #66792]	Corynebacterium callunae DSM 20147	2561511200	complete	JGI IMG/M	1121353 tax ID	*

[Ref.: #8571]	GC-content	54.0 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #8571]	GC-content	51.2 mol%
[Ref.: #67770]	GC-content	51.2 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	52.4 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Corynebacterium callunae DSM 20147 DSM 20147 NCBI: GCA_000344785.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Corynebacterium callunae DSM 20147 DSM 20147 NCBI: GCA_000344785.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	91.144	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	94.954	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	80.257	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	78.425	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	89	no

Availability in culture collections External links

Culture collection no.

CCUG 28793, CIP 104277, DSM 20147, ATCC 15991, CCM 7707, NCIB 10338, NRRL B-2244, JCM 9489, BCRC 12128, CECT 4015, HAMBI 2053, IFO 15359, IMSNU 21209, KCTC 1444, NBRC 15359, NCIMB 10338

SI-ID 36612

*

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Corynebacterium alimapuense sp. nov., an obligate marine actinomycete isolated from sediment of Valparaiso bay, Chile.	Claverias F, Gonzales-Siles L, Salva-Serra F, Inganas E, Molin K, Cumsille A, Undabarrena A, Couve E, Moore ERB, Tindall BJ, Gomila M, Camara B	Int J Syst Evol Microbiol	10.1099/ijsem.0.003237	2019	*
Phylogeny	Corynebacterium defluvii sp. nov., isolated from Sewage.	Yu QL, Yan ZF, He X, Tian FH, Jia CW, Li CT	J Microbiol	10.1007/s12275-017-6592-3	2017	*
Genetics	Complete genome sequencing of newly isolated thermotolerant Corynebacterium glutamicum N24 provides a new insights into its thermotolerant phenotype.	Matsutani M, Nantapong N, Murata R, Paisrisan P, Hirakawa H, Kataoka N, Yakushi T, Matsushita K	J Biotechnol	10.1016/j.jbiotec.2017.02.025	2017	*
Phylogeny	Corynebacterium crudilactis sp. nov., isolated from raw cow's milk.	Zimmermann J, Ruckert C, Kalinowski J, Lipski A	Int J Syst Evol Microbiol	10.1099/ijsem.0.001509	2016	*
Genetics	Genome sequence of the soil bacterium Corynebacterium callunae type strain DSM 20147(T).	Persicke M, Albersmeier A, Bednarz H, Niehaus K, Kalinowski J, Ruckert C	Stand Genomic Sci	10.1186/1944-3277-10-5	2015	*
Enzymology	The effect of various culture conditions on the levels of ammonia assimilatory enzymes of Corynebacterium callunae.	Ertan H	Arch Microbiol	10.1007/BF00249064	1992	*
Enzymology	Some properties of glutamate dehydrogenase, glutamine synthetase and glutamate synthase from Corynebacterium callunae.	Ertan H	Arch Microbiol	10.1007/BF00249063	1992	*
Phylogeny	Transfer of Brevibacterium divaricatum DSM 20297T, "Brevibacterium flavum" DSM 20411, "Brevibacterium lactofermentum" DSM 20412 and DSM 1412, and Corynebacterium glutamicum and their distinction by rRNA gene restriction patterns.	Liebl W, Ehrmann M, Ludwig W, Schleifer KH	Int J Syst Bacteriol	10.1099/00207713-41-2-255	1991	*

References

#8571

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20147

#18425

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#34925 ; Curators of the CIP;
#49383 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28793

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68369

Automatically annotated from API 20NE .

#68371

Automatically annotated from API 50CH acid .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#72601

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID36612.1 )

#117107 Collection of Institut Pasteur ; Curators of the CIP; CIP 104277

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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