Name: Adlercreutzia equolifaciens FJC-B9
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 3073

Type strain:

Species: Adlercreutzia equolifaciens

Strain Designation: FJC-B9

Culture col. no.: DSM 19450, CCUG 54925, JCM 14793, KCTC 15235

Strain history: <- CCUG <- Toshinari Maruo, FJC-B9

NCBI tax ID(s): 446660 (species)

SI-ID 406541

DSM 19450, CCUG 54925

Section

Adlercreutzia equolifaciens FJC-B9 is an anaerobe, mesophilic, Gram-positive bacterium that was isolated from human faeces.

Gram-positive
ovoid-shaped
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Coriobacteriia*
	Order	*Eggerthellales*
	Family	*Eggerthellaceae*
	Genus	*Adlercreutzia*
	Species	**Adlercreutzia equolifaciens**
	Full Scientific Name (LPSN)	Adlercreutzia equolifaciens Maruo et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #32379]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #32379]	Cell length	2.1 µm

[Ref.: #32379]	Cell width	0.65 µm

[Ref.: #32379]	Cell shape	ovoid-shaped

[Ref.: #32379]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #60388]

Incubation period

2-3 days

[Ref.: #32379]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8024]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #8024]

Culture medium growth

[Ref.: #8024]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8024]

Culture medium composition

expand / minimize

[Ref.: #8024]

Culture medium

WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)

[Ref.: #8024]

Culture medium growth

[Ref.: #8024]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8024]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #8024]	growth	37 °C
[Ref.: #60388]	growth	37 °C
[Ref.: #67770]	growth	37 °C
[Ref.: #67771]	growth	37 °C

[Ref.: #8024]	Temperature range	mesophilic
[Ref.: #60388]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8024]	Oxygen tolerance	anaerobe
[Ref.: #32379]	Oxygen tolerance	anaerobe
[Ref.: #60388]	Oxygen tolerance	anaerobe
[Ref.: #67771]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.078

[Ref.: #32379]	Ability of spore formation	no
[Ref.: #67771]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.987

[Ref.: #67770]	Observation	quinones: DMMK-6
[Ref.: #67771]	Observation	quinones: DMMK-6(70-96%), MMK-6(1-29%)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32379]	arginine ChEBI	+	carbon source
[Ref.: #68380]	arginine ChEBI	+	hydrolysis	* from API rID32A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A
[Ref.: #68380]	alpha-glucosidase	-	3.2.1.20	* from API rID32A
[Ref.: #68380]	arginine dihydrolase	+	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #8024]	12680	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #8024]	12679	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8024]	Sample type/isolated from	human faeces
[Ref.: #8024]	Country	Japan
[Ref.: #8024]	Country ISO 3 Code	JPN
[Ref.: #8024]	Continent	Asia

[Ref.: #60388]	Sample type/isolated from	Human feces,25-yr-old healthy woman
[Ref.: #60388]	Sampling date	2006-06-01
[Ref.: #60388]	Country	Japan
[Ref.: #60388]	Country ISO 3 Code	JPN
[Ref.: #60388]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Human feces

[Ref.: #67771]	Sample type/isolated from	From human feces
[Ref.: #67771]	Country	Japan
[Ref.: #67771]	Country ISO 3 Code	JPN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB649147 (>99% sequence identity) for Adlercreutzia equolifaciens subclade from Microbeatlas

Aquatic Samples	2542
Soil Samples	562
Animal Samples	99975
Plant Samples	215
Total Samples	103294

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8024]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8024]	Adlercreutzia equolifaciens gene for 16S ribosomal RNA, partial sequence, strain: FJC-B9	AB306661	1469	ENA	446660 tax ID
[Ref.: #20218]	Adlercreutzia equolifaciens gene for 16S ribosomal RNA, partial sequence	AB649147	1469	ENA	446660 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Adlercreutzia equolifaciens DSM 19450	GCA_000478885	complete	GenBank	1384484 tax ID	*
[Ref.: #66792]	Adlercreutzia equolifaciens KCTC 15235	GCA_003428235	contig	GenBank	446660 tax ID	*
[Ref.: #66792]	Adlercreutzia equolifaciens DSM 19450	1384484.3	complete	PATRIC	1384484 tax ID	*
[Ref.: #66792]	Adlercreutzia equolifaciens strain KCTC 15235	446660.3	wgs	PATRIC	446660 tax ID	*
[Ref.: #66792]	Adlercreutzia equolifaciens DSM 19450	2597489914	complete	JGI IMG/M	1384484 tax ID	*

[Ref.: #8024]	GC-content	64.1 mol%
[Ref.: #32379]	GC-content	64 mol%
[Ref.: #67770]	GC-content	64 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	64.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Adlercreutzia equolifaciens DSM 19450 DSM 19450 NCBI: GCA_000478885.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Adlercreutzia equolifaciens DSM 19450 DSM 19450 NCBI: GCA_000478885.1
[Ref.: #69480]	motile	no	93.829	yes
[Ref.: #69480]	flagellated	no	98.49	yes
[Ref.: #69480]	gram-positive	yes	91.296	yes
[Ref.: #69480]	anaerobic	yes	98.94	yes
[Ref.: #69480]	aerobic	no	96.037	no
[Ref.: #69480]	halophile	no	86.986	no
[Ref.: #69480]	spore-forming	no	93.116	no
[Ref.: #69480]	glucose-util	yes	65.38	no
[Ref.: #69480]	thermophile	no	99.191	no
[Ref.: #69480]	glucose-ferment	no	59.512	no

Availability in culture collections External links

[Ref.: #8024]

Culture collection no.

DSM 19450, CCUG 54925, JCM 14793, KCTC 15235

[Ref.: #72592]

SI-ID 406541

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Adlercreutzia hattorii sp. nov., an equol non-producing bacterium isolated from human faeces.	Sakamoto M, Ikeyama N, Yuki M, Murakami T, Mori H, Iino T, Ohkuma M	Int J Syst Evol Microbiol	10.1099/ijsem.0.005121	2021	*
Metabolism	Heterologous expression of equol biosynthesis genes from Adlercreutzia equolifaciens.	Vazquez L, Florez AB, Rodriguez J, Mayo B	FEMS Microbiol Lett	10.1093/femsle/fnab082	2021	*
Metabolism	Metabolism of Soy Isoflavones by Intestinal Bacteria: Genome Analysis of an Adlercreutzia Equolifaciens Strain That Does Not Produce Equol.	Vazquez L, Florez AB, Redruello B, Mayo B	Biomolecules	10.3390/biom10060950	2020	*
Metabolism	Transcriptional Regulation of the Equol Biosynthesis Gene Cluster in Adlercreutzia equolifaciens DSM19450(T).	Florez AB, Vazquez L, Rodriguez J, Redruello B, Mayo B	Nutrients	10.3390/nu11050993	2019	*
Phylogeny	Ellagibacter isourolithinifaciens gen. nov., sp. nov., a new member of the family Eggerthellaceae, isolated from human gut.	Beltran D, Romo-Vaquero M, Espin JC, Tomas-Barberan FA, Selma MV	Int J Syst Evol Microbiol	10.1099/ijsem.0.002735	2018	*
Metabolism	Biotransformation of (-)-epigallocatechin and (-)-gallocatechin by intestinal bacteria involved in isoflavone metabolism.	Takagaki A, Nanjo F	Biol Pharm Bull	10.1248/bpb.b14-00646	2015	*
Genetics	Complete Genome Sequence of the Equol-Producing Bacterium Adlercreutzia equolifaciens DSM 19450T.	Toh H, Oshima K, Suzuki T, Hattori M, Morita H	Genome Announc	10.1128/genomeA.00742-13	2013	*
Phylogeny	Adlercreutzia equolifaciens gen. nov., sp. nov., an equol-producing bacterium isolated from human faeces, and emended description of the genus Eggerthella.	Maruo T, Sakamoto M, Ito C, Toda T, Benno Y	Int J Syst Evol Microbiol	10.1099/ijs.0.65404-0	2008	*

References

#8024

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19450

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#32379

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28606 (see below)

#60388 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54925

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68380

Automatically annotated from API rID32A .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#72592

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406541.1 )

#28606

IJSEM 1221 2008 ( DOI 10.1099/ijs.0.65404-0 , PubMed 18450717 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Adlercreutzia equolifaciens subsp. equolifaciens in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Adlercreutzia equolifaciens DSM 19450 DSM 19450

Adlercreutzia equolifaciens DSM 19450 DSM 19450

Change proposal

Change proposal