Adlercreutzia equolifaciens subsp. celata (DSM 18785, JCM 14811, AHU 1763)

Name: Adlercreutzia equolifaciens subsp. celata (DSM 18785, JCM 14811, AHU 1763)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3072

Type strain

Strain Designation do03

Culture col. no. DSM 18785 JCM 14811 AHU 1763 do03 KCTC 15587

NCBI tax ID(s) 1121021 394340

Special Collections DSMZ JCM KCTC Literature strains

History DSMZ <- K. Asano <-K. Minamida, strain do03 JCM <-- K. Asano do03 <-- K. Minamida do03.

Links

Adlercreutzia equolifaciens subsp. celata do03 is an anaerobe, Gram-positive, rod-shaped bacterium that was isolated from rat caecum.

Gram-positive rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 402468

JCM 14811,DSM 18785

@ref 20215

Last LPSN update 2026-05-29 08:25:37

Domain Bacteria

Phylum Actinomycetota

Class Coriobacteriia

Order Eggerthellales

Family Eggerthellaceae

Genus Adlercreutzia

Species Adlercreutzia equolifaciens subsp. celata

Full scientific name Adlercreutzia equolifaciens subsp. celata corrig. (Minamida et al. 2008) Nouioui et al. 2018

Synonyms (2)

Adlercreutzia equolifaciens subsp. celatus
Asaccharobacter celatus

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
32059	positive	2.5 µm	0.45 µm	rod-shaped
125439	negative				93.137

Pigmentation

32059

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7696	CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)		Medium recipe at MediaDive	Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7696	positive	growth	37
32059	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
7696	anaerobe
32059	anaerobe
125439	obligate anaerobe	95.975

Spore formation

@ref	Spore formation	Confidence
32059
125439		99.778

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	+	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
32059	acid phosphatase	+	3.1.3.2
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
32059	alkaline phosphatase	+	3.1.3.1
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68380	arginine dihydrolase	+	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
7696	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Muridae (Mouse/Rat)
#Host Body-Site	#Gastrointestinal tract	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
7696	rat caecum	Japan	JPN	Asia
67770	Rat cecum

Taxonmaps

69479

Global distribution of 16S sequence AB849124 (>99% sequence identity) for Adlercreutzia equolifaciens subclade from Microbeatlas

Aquatic Samples	2542
Soil Samples	562
Animal Samples	99975
Plant Samples	215
Total Samples	103294

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7696	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1686538v1 assembly for Adlercreutzia equolifaciens subsp. celatus JCM 14811	complete	GCA_016865385	1121021.16	8002119576	394340	96.96
66792	ASM2417168v1 assembly for Adlercreutzia equolifaciens subsp. celatus DSM 18785	contig	GCA_024171685	1121021.17	2574179708	1121021	69.74
66792	ASM372601v1 assembly for Adlercreutzia equolifaciens subsp. celatus DSM 18785	contig	GCA_003726015	1121021.3	8118929284	1121021	64.55
67770	ASM342848v1 assembly for Adlercreutzia equolifaciens subsp. celatus JCM 14811	contig	GCA_003428485	394340.5	8117389852	394340	55.69

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Asaccharobacter celatus gene for 16S ribosomal RNA, partial sequence, strain: JCM 14811	AB849124	1469		394340
7696	Asaccharobacter celatus gene for 16S rRNA, partial sequence	AB266102	1428		1121021

GC content

@ref	GC-content (mol%)	Method
7696	63
67770	63	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1686538v1 assembly for Adlercreutzia equolifaciens subsp. celatus JCM 14811
BV-BRC: 1121021.16

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	95.98	no
125439	gram_stain	BacteriaNetⓘ	negative	93.14	no
125439	motility	BacteriaNetⓘ	yes	71.66	no
125439	spore_formation	BacteriaNetⓘ	no	99.78	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Asaccharobacter celatus DSM 18785
PATRIC: 1121021.16

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	79.95	yes
125438	anaerobic	anaerobicⓘ	yes	89.91	yes
125438	spore-forming	spore-formingⓘ	no	81.05	yes
125438	aerobic	aerobicⓘ	no	95.61	yes
125438	thermophilic	thermophileⓘ	no	88.90	yes
125438	flagellated	motile2+ⓘ	no	85.54	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Metatranscriptomics-guided discovery and characterization of a polyphenol-metabolizing gut microbial enzyme.	Bae M, Le C, Mehta RS, Dong X, Pieper LM, Ramirez L, Alexander M, Kiamehr S, Turnbaugh PJ, Huttenhower C, Chan AT, Balskus EP.	Cell Host Microbe	10.1016/j.chom.2024.10.002	2024
	Correction for Takahashi et al., "Complete Genome Sequence of Adlercreutzia equolifaciens subsp. celatus JCM 14811^T".	Takahashi H, Yang J, Yamamoto H, Fukuda S, Arakawa K.	Microbiol Resour Announc	10.1128/mra.00507-21	2021
Pathogenicity	Adlercreutzia equolifaciens Is an Anti-Inflammatory Commensal Bacterium with Decreased Abundance in Gut Microbiota of Patients with Metabolic Liver Disease.	Onate FP, Chamignon C, Burz SD, Lapaque N, Monnoye M, Philippe C, Bredel M, Chene L, Farin W, Paillarse JM, Boursier J, Ratziu V, Mousset PY, Dore J, Gerard P, Blottiere HM.	Int J Mol Sci	10.3390/ijms241512232	2023
Genetics	A Genomic Toolkit for the Mechanistic Dissection of Intractable Human Gut Bacteria.	Bisanz JE, Soto-Perez P, Noecker C, Aksenov AA, Lam KN, Kenney GE, Bess EN, Haiser HJ, Kyaw TS, Yu FB, Rekdal VM, Ha CWY, Devkota S, Balskus EP, Dorrestein PC, Allen-Vercoe E, Turnbaugh PJ.	Cell Host Microbe	10.1016/j.chom.2020.04.006	2020
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
	Lactiplantibacillus plantarum Interstrain Variability in the Production of Bioactive Phenolic Metabolites from Flavan-3-ols.	Pulido-Mateos EC, Lessard-Lord J, Desjardins Y, Roy D.	J Agric Food Chem	10.1021/acs.jafc.4c07890	2024
Genetics	Complete Genome Sequence of Adlercreutzia equolifaciens subsp. celatus DSM 18785.	Takahashi H, Yang J, Yamamoto H, Fukuda S, Arakawa K	Microbiol Resour Announc	10.1128/MRA.00354-21	2021
Metabolism	Biotransformation of (-)-epigallocatechin and (-)-gallocatechin by intestinal bacteria involved in isoflavone metabolism.	Takagaki A, Nanjo F	Biol Pharm Bull	10.1248/bpb.b14-00646	2015
Enzymology	Biotransformation of daidzein to equol by crude enzyme from Asaccharobacter celatus AHU1763 required an anaerobic environment.	Thawornkuno C, Tanaka M, Sone T, Asano K	Biosci Biotechnol Biochem	10.1271/bbb.80908	2009
Phylogeny	Ellagibacter isourolithinifaciens gen. nov., sp. nov., a new member of the family Eggerthellaceae, isolated from human gut.	Beltran D, Romo-Vaquero M, Espin JC, Tomas-Barberan FA, Selma MV	Int J Syst Evol Microbiol	10.1099/ijsem.0.002735	2018
Phylogeny	Isolation of bacteria from the ileal mucosa of TNFdeltaARE mice and description of Enterorhabdus mucosicola gen. nov., sp. nov.	Clavel T, Charrier C, Braune A, Wenning M, Blaut M, Haller D	Int J Syst Evol Microbiol	10.1099/ijs.0.003087-0	2009
Phylogeny	Asaccharobacter celatus gen. nov., sp. nov., isolated from rat caecum.	Minamida K, Ota K, Nishimukai M, Tanaka M, Abe A, Sone T, Tomita F, Hara H, Asano K	Int J Syst Evol Microbiol	10.1099/ijs.0.64894-0	2008

References

#7696	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18785
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#28308	IJSEM 1238 2008 ( DOI 10.1099/ijs.0.64894-0 , PubMed 18450720 )
#32059	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28308
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68380	Automatically annotated from API rID32A .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Adlercreutzia equolifaciens subsp. celata (DSM 18785, JCM 14811, AHU 1763)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API rID32A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016865385

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media