Olsenella profusa D315A-29 | Type strain | CIP 106885, JCM 14553, DSM 13989, CCUG 45371

Strain identifier

BacDive ID: 3060

Type strain:

Species: Olsenella profusa

Strain Designation: D315A-29

Culture col. no.: CIP 106885, JCM 14553, DSM 13989, CCUG 45371

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #5207]	Domain	Bacteria
[Ref.: #5207]	Phylum	Actinobacteria
[Ref.: #5207]	Class	Coriobacteriia
[Ref.: #5207]	Order	Coriobacteriales
[Ref.: #5207]	Family	Atopobiaceae
[Ref.: #5207]	Genus	Olsenella
[Ref.: #5207]	Species	Olsenella profusa
[Ref.: #5207]	Full Scientific Name	Olsenella profusa Dewhirst et al. 2001 emend. Kraatz et al. 2011
[Ref.: #5207]	Strain Designation	D315A-29
[Ref.: #5207]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	25-03-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Coriobacteriia		Int. J. Syst. Evol. Microbiol. 63:1577
[Ref.: #20215]	Family	Atopobiaceae		Int. J. Syst. Evol. Microbiol. 63:3395*
[Ref.: #20215]	Genus	Olsenella	gen. nov. (VP)	Int. J. Syst. Evol. Microbiol. 51:1797*
[Ref.: #20215]	Species	Olsenella profusa	sp. nov. (VP)	Int. J. Syst. Evol. Microbiol. 51:1797*
[Ref.: #20215]	Full Scientific Name	Olsenella profusa Dewhirst et al. 2001 emend. Kraatz et al. 2011

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #5207]	Murein short key	A11.31
[Ref.: #5207]	Murein types	A4alpha L-Lys-D-Asp

[Ref.: #56749]

Oxygen tolerance

obligate anaerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #5207]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104), 37°C

[Ref.: #5207]

Culture medium growth

[Ref.: #5207]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #38652]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #38652]

Culture medium growth

[Ref.: #38652]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #5207]	growth	37 ̊C
[Ref.: #38652]	growth	37 ̊C
[Ref.: #56749]	growth	37 ̊C

[Ref.: #5207]	Temperature range	mesophilic
[Ref.: #38652]	Temperature range	mesophilic
[Ref.: #56749]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #5207]

Sample type/isolated from

subgingival plaque

[Ref.: #5207]

Country

USA

[Ref.: #5207]

Continent

North America

[Ref.: #56749]

Sample type/isolated from

Subgingival plaque in adult with periodontitis

Isolation sources categories

#Host Body-Site

#Oral cavity and airways

#Subgingival plaque

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #5207]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #5207]

GC-content

64 mol%

high performance liquid chromatography (HPLC)

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Olsenella profusa partial 16S rRNA gene, type strain DSM 13989T	FN178465	16S	1428	997349	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Olsenella profusa partial 16S rRNA gene, type strain CCUG 45371T	FN178466	16S	1428	997349	*
[Ref.: #5207]	GenBank Direct submission		AF292374

Availability in culture collectionsStrain availability

[Ref.: #5207]

Culture collection no.

CIP 106885, JCM 14553, DSM 13989, CCUG 45371

[Ref.: #5207]

Strain history

<- J. Downes; D315A-29 <- Forsyth Dental Institute, Boston <- VPI (Eubacterium D52)

[Ref.: #20218]

Associated Passport(s) in StrainInfo

163894, 330348

References

#5207

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13989

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#38652 ; Curators of the CIP;
#56749 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45371
* These References are textmined

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