Name: Acidiphilium acidophilum DSM 700
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 30

Type strain:

Species: Acidiphilium acidophilum

Culture col. no.: DSM 700, ATCC 27807, CIP 104483

Strain history: CIP <- 1995, DSM <- R. Guay <- (D.G. Lundgren)

NCBI tax ID(s): 1307921 (strain), 76588 (species)

SI-ID 39187

ATCC 27807, DSM 700, CIP 104483, NCIMB 12628, NCIM 5131

Section

Acidiphilium acidophilum DSM 700 is a mesophilic bacterium that was isolated from culture of Thiobacillus ferrooxidans, strain TM .

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Acidiphilium*
	Species	**Acidiphilium acidophilum**
	Full Scientific Name (LPSN)	Acidiphilium acidophilum (Harrison 1983 ex Guay and Silver 1975) Hiraishi et al. 1998

Synonym

"Thiobacillus acidophilus"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #363]

Culture medium

ACIDIPHILIUM ACIDOPHILUM MEDIUM (DSMZ Medium 108)

[Ref.: #363]

Culture medium growth

[Ref.: #363]

Culture medium link

Medium recipe at MediaDive

[Ref.: #363]

Culture medium composition

expand / minimize

[Ref.: #41191]

Culture medium

MEDIUM 125 - for Thiobacillus acidophilus

[Ref.: #41191]

Culture medium growth

[Ref.: #41191]

Culture medium composition

expand / minimize

[Ref.: #116017]

Culture medium

CIP Medium 125

[Ref.: #116017]

Culture medium growth

[Ref.: #116017]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #363]			growth	30 °C
[Ref.: #41191]			growth	26 °C

[Ref.: #363]	Temperature range	mesophilic
[Ref.: #41191]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #363]

Name of produced compound

threonine deaminase

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #363]	Sample type/isolated from	derived from culture of Thiobacillus ferrooxidans, strain TM (D.G. Lundgren, Syracuse University, NY, USA)
[Ref.: #363]	Host species	Thiobacillus ferrooxidans

[Ref.: #116017]	Isolation date	1975
* marker position based on {}

Isolation sources categories

#Host

#Microbial

#Bacteria

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence D86511 (>99% sequence identity) for Acidiphilium acidophilum from Microbeatlas

Aquatic Samples	221
Soil Samples	110
Animal Samples	37
Plant Samples	8
Total Samples	376

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #363]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116017]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #363]	Acidiphilium acidophilum gene for 16S rRNA	D86511	1419	ENA	76588 tax ID
[Ref.: #20218]	Thiobacillus acidophilus 16S rRNA sequence	M79399	656	ENA	76588 tax ID	*
[Ref.: #20218]	Thiobacillus acidophilus 16S rRNA sequence	M79400	340	ENA	76588 tax ID	*

[Ref.: #363]

GC-content

62.9-63.2 mol%

Availability in culture collections External links

[Ref.: #363]

Culture collection no.

DSM 700, ATCC 27807, CIP 104483

[Ref.: #69714]

SI-ID 39187

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Detection of Acidithiobacillus ferrooxidans in acid mine drainage environments using fluorescent in situ hybridization (FISH).	Mahmoud KK, Leduc LG, Ferroni GD	J Microbiol Methods	10.1016/j.mimet.2004.10.022	2005	*
Metabolism	The sulfane sulfur of persulfides is the actual substrate of the sulfur-oxidizing enzymes from Acidithiobacillus and Acidiphilium spp.	Rohwerder T, Sand W	Microbiology (Reading)	10.1099/mic.0.26212-0	2003	*
Phylogeny	Phylogeny and photosynthetic features of Thiobacillus acidophilus and related acidophilic bacteria: its transfer to the genus Acidiphilium as Acidiphilium acidophilum comb. nov.	Hiraishi A, Nagashima KV, Matsuura K, Shimada K, Takaichi S, Wakao N, Katayama Y	Int J Syst Bacteriol	10.1099/00207713-48-4-1389	1998	*

References

#363	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 700

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#41191 ; Curators of the CIP;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69714

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39187.1 )

#116017 Collection of Institut Pasteur ; Curators of the CIP; CIP 104483
* These data were automatically processed and therefore are not curated

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