Strain identifier

BacDive ID: 30

Type strain: Yes

Species: Acidiphilium acidophilum

Strain history: <- R. Guay, Université Laval, Québec, Canada <- R. Guay and M. Silver {1975}

NCBI tax ID(s): 76588 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 363

BacDive-ID: 30

DSM-Number: 700

keywords: mesophilic, Bacteria, 16S sequence

description: Acidiphilium acidophilum DSM 700 is a mesophilic Proteobacterium that was isolated from culture of Thiobacillus ferrooxidans, strain TM .

NCBI tax id

  • NCBI tax id: 76588
  • Matching level: species

strain history: <- R. Guay, Université Laval, Québec, Canada <- R. Guay and M. Silver {1975}

doi: 10.13145/bacdive30.20211221.6

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Acetobacteraceae
  • genus: Acidiphilium
  • species: Acidiphilium acidophilum
  • full scientific name: Acidiphilium acidophilum (Harrison 1983) Hiraishi et al. 1998
  • synonyms

    • @ref: 20215
    • synonym: Thiobacillus acidophilus

@ref: 363

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhizobiales

family: Acetobacteraceae

genus: Acidiphilium

species: Acidiphilium acidophilum

full scientific name: Acidiphilium acidophilum (Harrison 1983) Hiraishi et al. 1998

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
363ACIDIPHILIUM ACIDOPHILUM MEDIUM (DSMZ Medium 108)yeshttps://bacmedia.dsmz.de/medium/108Name: ACIDIPHILIUM ACIDOPHILUM MEDIUM (DSMZ Medium 108) Composition: Agar 15.0 g/l D-Glucose 10.0 g/l (NH4)2SO4 3.0 g/l MgSO4 x 7 H2O 1.0 g/l KH2PO4 0.5 g/l KCl 0.1 g/l Ca(NO3)2 x 4 H2O 0.018 g/l FeSO4 x 7 H2O 1e-05 g/l Distilled water
41191MEDIUM 125 - for Thiobacillus acidophilusyesDistilled water make up to (1000.000 ml);Potassium chloride (0.100 mg);Iron (II) sulphate heptahydrate (0.010 mg);Magnesium sulphate heptahydrate (1.000 g);Agar (15.000 g);Glucose (10.000 g);Ammonium sulphate (3.000 g);Potassium di-hydrogen phosphate (0.5

culture temp

@refgrowthtypetemperaturerange
363positivegrowth30mesophilic
41191positivegrowth26mesophilic

Physiology and metabolism

compound production

  • @ref: 363
  • compound: threonine deaminase

Isolation, sampling and environmental information

isolation

  • @ref: 363
  • sample type: derived from culture of Thiobacillus ferrooxidans, strain TM (D.G. Lundgren, Syracuse University, NY, USA)
  • host species: Thiobacillus ferrooxidans

isolation source categories

  • Cat1: #Host
  • Cat2: #Microbial
  • Cat3: #Bacteria

Safety information

risk assessment

  • @ref: 363
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Thiobacillus acidophilus 16S rRNA sequenceM79399656ena76588
20218Thiobacillus acidophilus 16S rRNA sequenceM79400340ena76588
363Acidiphilium acidophilum gene for 16S rRNAD865111419ena76588

GC content

  • @ref: 363
  • GC-content: 62.9-63.2

External links

@ref: 363

culture collection no.: DSM 700, ATCC 27807, CIP 104483

straininfo link

@refpassport
20218http://www.straininfo.net/strains/105998
20218http://www.straininfo.net/strains/105997
20218http://www.straininfo.net/strains/156916

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
363Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 700)https://www.dsmz.de/collection/catalogue/details/culture/DSM-700
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
41191Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/16396