Acidiphilium multivorum (DSM 11245, JCM 8867, NBRC 100785)

Name: Acidiphilium multivorum (DSM 11245, JCM 8867, NBRC 100785)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 31

Type strain

Culture col. no. DSM 11245 JCM 8867 NBRC 100785 NBRC 100883

NCBI tax ID(s) 62140

Special Collections DSMZ JCM

History DSMZ <- JCM <- N. Wakao, strain AIU 301 JCM <-- N. Wakao AIU 301.

Links

Acidiphilium multivorum DSM 11245 is a bacterium that was isolated from acid mine water.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 49054

DSM 11245,JCM 8867,NBRC 100785,NBRC 100883

@ref 20215

Last LPSN update 2026-05-29 08:24:55

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Acidiphilium

Species Acidiphilium multivorum

Full scientific name Acidiphilium multivorum Wakao et al. 1995

BacDive ID	Other strains from **Acidiphilium multivorum** (3)	Type strain
165962	A. multivorum JCM 8869, NBRC 100884
165963	A. multivorum JCM 8871, NBRC 100885
165964	A. multivorum JCM 8872, NBRC 100886

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	94.66

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4256	ACIDIPHILIUM MEDIUM (DSMZ Medium 269)		Medium recipe at MediaDive	Name: ACIDIPHILIUM MEDIUM (DSMZ Medium 269; with strain-specific modifications) Composition: (NH4)2SO4 2.0 g/l D-Glucose 1.0 g/l MgSO4 x 7 H2O 0.5 g/l K2HPO4 0.5 g/l KCl 0.1 g/l Trypticase soy broth 0.1 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
4256	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Observation

67770

Observationquinones: Q-10

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Other	#Mine
#Environmental	#Aquatic	-
#Condition	#Acidic	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
4256	acid mine water	Iwate, Matsuo sulfur-pyrite mine	Japan	JPN	Asia
67770	Acid mine drainage at the abandoned Matsuo sulfur-pyrite mine	Iwate	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence NR_074327 (>99% sequence identity) for Acidiphilium from Microbeatlas

Aquatic Samples	1984
Soil Samples	1654
Animal Samples	607
Plant Samples	360
Total Samples	4605

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4256	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM20283v1 assembly for Acidiphilium multivorum AIU301	complete	GCA_000202835	926570.3	650716002	926570	96.94
67770	ASM96434v1 assembly for Acidiphilium multivorum AIU301	scaffold	GCA_000964345			926570	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
4256	Acidiphilium multivorum strain AIU301 16S ribosomal RNA, complete sequence	NR_074327	1491		62140
67770	Acidiphilium multivorum gene for 16S rRNA, strain:AIU 301	AB006711	1451		62140

GC content

@ref	GC-content (mol%)	Method
4256	67.6	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM20283v1 assembly for Acidiphilium multivorum AIU301
NCBI: GCA_000202835

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	89.97	no
125439	gram_stain	BacteriaNetⓘ	negative	83.69	no
125439	motility	BacteriaNetⓘ	no	62.40	no
125439	spore_formation	BacteriaNetⓘ	no	86.02	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acidiphilium multivorum AIU301 AIU301
NCBI: GCA_000964345.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	94.66	no
125438	anaerobic	anaerobicⓘ	no	85.00	no
125438	aerobic	aerobicⓘ	yes	72.09	no
125438	spore-forming	spore-formingⓘ	no	86.71	no
125438	thermophilic	thermophileⓘ	no	94.05	yes
125438	flagellated	motile2+ⓘ	yes	71.54	no

Literature

Title	Authors	Journal	DOI	Year
Nucleotide sequence analysis of cryptic plasmid pAM5 from Acidiphilium multivorum.	Singh SK, Banerjee PC.	Plasmid	10.1016/j.plasmid.2007.01.005	2007

References

#4256	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11245
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Acidiphilium multivorum (DSM 11245, JCM 8867, NBRC 100785)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000202835

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media