Name: Exiguobacterium indicum DSM 28408
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24782

Type strain:

Species: Exiguobacterium indicum

Culture col. no.: DSM 28408, CCUG 58096, HHS 31, IAM 15368, LMG 23471, LMG 24569

Strain history: <- CCUG; CCUG 58096 <- LMG; LMG 23471 <- S. Shivaji, CCMB; HHS 31

NCBI tax ID(s): 1358421 (strain), 296995 (species)

SI-ID 292778

LMG 23471, IAM 15368, LMG 24569, CCUG 58096

Section

Exiguobacterium indicum DSM 28408 is an aerobe, mesophilic bacterium that was isolated from water.

aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Exiguobacterium*
	Species	**Exiguobacterium indicum**
	Full Scientific Name (LPSN)	Exiguobacterium indicum Chaturvedi and Shivaji 2006

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #61596]			growth	28 °C

[Ref.: #61596]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #61596]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20559]	Sample type/isolated from	water
[Ref.: #20559]	Geographic location (country and/or sea, region)	Hamta pass, Himachal Pradesh
[Ref.: #20559]	Country	India
[Ref.: #20559]	Country ISO 3 Code	IND
[Ref.: #20559]	Continent	Asia

[Ref.: #61596]	Sample type/isolated from	Water
[Ref.: #61596]	Sampling date	2000
[Ref.: #61596]	Geographic location (country and/or sea, region)	Himachal Pradesh,Hamta pass
[Ref.: #61596]	Country	India
[Ref.: #61596]	Country ISO 3 Code	IND
[Ref.: #61596]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ846291 (>99% sequence identity) for Exiguobacterium from Microbeatlas

Aquatic Samples	18655
Soil Samples	9088
Animal Samples	28214
Plant Samples	7886
Total Samples	63843

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20559]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20559]	Exiguobacterium indicum partial 16S rRNA gene, type strain HHS 31T	AJ846291	1503	ENA	296995 tax ID

[Ref.: #20559]

GC-content

48.0 mol%

Availability in culture collections External links

[Ref.: #20559]

Culture collection no.

DSM 28408, CCUG 58096, HHS 31, IAM 15368, LMG 23471, LMG 24569

[Ref.: #88606]

SI-ID 292778

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Exiguobacterium enclense sp. nov., isolated from sediment.	Dastager SG, Mawlankar R, Sonalkar VV, Thorat MN, Mual P, Verma A, Krishnamurthi S, Tang SK, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.000149	2015	*
Phylogeny	Exiguobacterium soli sp. nov., a psychrophilic bacterium from the McMurdo Dry Valleys, Antarctica.	Chaturvedi P, Prabahar V, Manorama R, Pindi PK, Bhadra B, Begum Z, Shivaji S	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/000067-0	2008	*
Phylogeny	Exiguobacterium indicum sp. nov., a psychrophilic bacterium from the Hamta glacier of the Himalayan mountain ranges of India.	Chaturvedi P, Shivaji S	Int J Syst Evol Microbiol	10.1099/ijs.0.64508-0	2006	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20559

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28408

#61596 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 58096

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88606

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID292778.1 )

* These data were automatically processed and therefore are not curated

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