Name: Exiguobacterium himgiriensis K22-26
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24781

Type strain:

Species: Exiguobacterium himgiriensis

Strain Designation: K22-26

Culture col. no.: DSM 27935, JCM 14260, MTCC 7628

Strain history: S. Mayilraj K22-26.

NCBI tax ID(s): 44751 (species)

Section

Exiguobacterium himgiriensis K22-26 is a mesophilic bacterium that was isolated from soil. 45 cm below an ice glacier, 4.200m above sea level.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Exiguobacterium*
	Species	"Exiguobacterium himgiriensis"
	Full Scientific Name (LPSN)	Exiguobacterium himgiriensis Singh et al. 2013

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20558]	Sample type/isolated from	soil. 45 cm below an ice glacier, 4.200m above sea level
[Ref.: #20558]	Geographic location (country and/or sea, region)	Kibber village, Spiti valley, Himachal Pradesh
[Ref.: #20558]	Country	India
[Ref.: #20558]	Country ISO 3 Code	IND
[Ref.: #20558]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil, 45 cm below an ice glacier, 4,200 m above sea level
[Ref.: #67770]	Geographic location (country and/or sea, region)	Kibber Village of the Spiti Valley, Himachal Pradesh
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Glacier
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX999056 (>99% sequence identity) for Exiguobacterium from Microbeatlas

Aquatic Samples	2262
Soil Samples	574
Animal Samples	3194
Plant Samples	531
Total Samples	6561

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20558]	Exiguobacterium himgiriensis strain K22-26 16S ribosomal RNA gene, partial sequence	JX999056	1482	ENA	384621 tax ID

[Ref.: #67770]

GC-content

50.1 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #20558]

Culture collection no.

DSM 27935, JCM 14260, MTCC 7628

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Exiguobacterium himgiriensis sp. nov. a novel member of the genus Exiguobacterium, isolated from the Indian Himalayas.	Singh NK, Raichand R, Kaur I, Kaur C, Pareek S, Mayilraj S	Antonie Van Leeuwenhoek	10.1007/s10482-012-9861-5	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20558

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27935

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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