Name: Thiorhodovibrio winogradskyi SSP1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 2475

Type strain:

Species: Thiorhodovibrio winogradskyi

Strain Designation: SSP1

Culture col. no.: DSM 6702

Strain history: <- J. Overmann, SSP1

NCBI tax ID(s): 77007 (species)

SI-ID 48272

DSM 6702

Special Collections

DSMZ

Section

Thiorhodovibrio winogradskyi SSP1 is an anaerobe bacterium of the family Chromatiaceae.

anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Chromatiales*
	Family	*Chromatiaceae*
	Genus	*Thiorhodovibrio*
	Species	**Thiorhodovibrio winogradskyi**
	Full Scientific Name (LPSN)	Thiorhodovibrio winogradskyi Overmann et al. 1993

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2779]

Culture medium

PFENNIG'S MEDIUM I (modified 1988, for purple sulfur bacteria) (DSMZ Medium 28)

[Ref.: #2779]

Culture medium growth

[Ref.: #2779]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2779]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2779]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #2779]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2779]	Geographic location (country and/or sea, region)	British Columbia, Mahoney Lake
[Ref.: #2779]	Country	Canada
[Ref.: #2779]	Country ISO 3 Code	CAN
[Ref.: #2779]	Continent	North America
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence Y12368 (>99% sequence identity) for Thiorhodovibrio winogradskyi subclade from Microbeatlas

Aquatic Samples	9
Soil Samples	1
Animal Samples
Plant Samples
Total Samples	10

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2779]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Thiorhodovibrio winogradskyi gene for 16S rRNA, partial sequence, strain: MBIC2776	AB016986	1456	GenBank ENA	77007 tax ID	*
[Ref.: #20218]	Thiorhodovibrio winogradskyi 16S rDNA gene, strain SSP1	AJ006214	1382	GenBank ENA	77007 tax ID	*
[Ref.: #20218]	Thiorhodovibrio winogradskyi partial 16S rRNA gene, type strain DSM 6702T	Y12368	1453	GenBank ENA	77007 tax ID	*

Availability in culture collections External links

[Ref.: #2779]

Culture collection no.

DSM 6702

[Ref.: #72017]

SI-ID 48272

References

#2779

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6702

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#72017

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48272.1 )

* These data were automatically processed and therefore are not curated

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