Thiorhodococcus kakinadensis (DSM 18858, ATCC BAA-1353, JCM 14150)

Name: Thiorhodococcus kakinadensis (DSM 18858, ATCC BAA-1353, JCM 14150)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2474

Type strain

Strain Designation JA 130

Culture col. no. DSM 18858 ATCC BAA-1353 JCM 14150 JA 130

NCBI tax ID(s) 390879

Special Collections DSMZ JCM Literature strains

History DSMZ <- C. Sasikala, Bacterial Discovery Lab., Centre Environment, Inst. Sci. and Technol., J. N. T. Univ., Hyderabad, India; JA 130 <- P. A. Kumar JCM <-- Ch. Sasikala JA130.

Links

Thiorhodococcus kakinadensis JA 130 is an obligate anaerobe, Gram-negative, motile bacterium that was isolated from marine tidal waters from a fishing harbour.

Gram-negative motile coccus-shaped obligate anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 319400

ATCC BAA-1353,DSM 18858,JCM 14150

@ref 20215

Last LPSN update 2026-05-29 08:25:28

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Chromatiales

Family Chromatiaceae

Genus Thiorhodococcus

Species Thiorhodococcus kakinadensis

Full scientific name Thiorhodococcus kakinadensis Anil Kumar et al. 2007

Morphology

Cell morphology

@ref	Gram stain	Cell width	Cell shape	Motility
32051	negative	0.4 µm	coccus-shaped

Pigmentation

32051

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7748	PHOTOTROPHIC MEDIUM (DSMZ Medium 1129)		Medium recipe at MediaDive	Name: PHOTOTROPHIC MEDIUM (DSMZ Medium 1129) Composition: NaCl 20.0 g/l MgCl2 x 6 H2O 1.0 g/l NH4Cl 0.6 g/l KH2PO4 0.5 g/l Yeast extract 0.4 g/l CaCl2 x 2 H2O 0.15 g/l Ferric citrate 0.005 g/l CoCl2 x 6 H2O 0.0002 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l H3BO3 6e-05 g/l Na2MoO4 x 2 H2O 4e-05 g/l CuCl2 x 2 H2O 2e-05 g/l NiCl2 x 6 H2O 2e-05 g/l HCl Distilled water
7748	PFENNIG'S MEDIUM I (modified 1988, for purple sulfur bacteria) (DSMZ Medium 28)		Medium recipe at MediaDive	Name: PFENNIG'S MEDIUM I (DSMZ Medium 28; with strain-specific modifications) Composition: NaCl 10.0 g/l NaHCO3 1.5 g/l Na2S x 9 H2O 0.592592 g/l MgSO4 x 7 H2O 0.500001 g/l Ammonium chloride 0.349999 g/l KCl 0.349999 g/l KH2PO4 0.349999 g/l CaCl2 x 2 H2O 0.25 g/l Yeast extract 0.25 g/l Ammonium acetate 0.25 g/l Pyruvic acid sodium salt 0.25 g/l Dextrose 0.25 g/l Na2-EDTA 0.003 g/l Resazurin 0.00225 g/l FeSO4 x 7 H2O 0.0011 g/l Vitamin B12 0.001 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 2 H2O 5e-05 g/l ZnCl2 4.2e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l Na2MoO4 x 2 H2O 1.8e-05 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7748	positive	growth	28
32051	positive	optimum	30
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH
32051	positive	optimum	7.2
32051	positive	growth	6.5-7.2

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
7748	obligate anaerobe
32051	anaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32051	NaCl	positive	growth	0.5-5.0 %
32051	NaCl	positive	optimum	1.5 %

Observation

32051

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32051	30089 ChEBI	acetate	+	carbon source
32051	35391 ChEBI	aspartate	+	carbon source
32051	24996 ChEBI	lactate	+	carbon source
32051	25115 ChEBI	malate	+	carbon source
32051	17272 ChEBI	propionate	+	carbon source
32051	15361 ChEBI	pyruvate	+	carbon source
32051	30031 ChEBI	succinate	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
7748	marine tidal waters from a fishing harbour	eastern coast of India, Bay of Bengal, beach of Kakinada (16° 54' N, 82° 14' E)				16.9	82.2333 16.9/82.2333
67770	Beach of Kakinada, near a fishing harbour	Bay of Bengal, eastern coast of India	India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence AM282561 (>99% sequence identity) for Thiorhodococcus kakinadensis from Microbeatlas

Aquatic Samples	4
Soil Samples	0
Animal Samples	1
Plant Samples	0
Total Samples	5

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7748	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7748	Thiorhodococcus kakinadensis 16S rRNA gene, type strain JA130T	AM282561	1436		390879

GC content

@ref	GC-content (mol%)	Method
7748	57.5	high performance liquid chromatography (HPLC)
32051	57.5

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Two novel species of marine phototrophic Gammaproteobacteria: Thiorhodococcus bheemlicus sp. nov. and Thiorhodococcus kakinadensis sp. nov.	Anil Kumar P, Sasi Jyothsna TS, Srinivas TNR, Sasikala C, Ramana CV, Imhoff JF	Int J Syst Evol Microbiol	10.1099/ijs.0.64880-0	2007

References

#7748	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18858
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28301	IJSEM 2458 2007 ( DOI 10.1099/ijs.0.64880-0 , PubMed 17978199 )
#32051	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28301
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thiorhodococcus kakinadensis (DSM 18858, ATCC BAA-1353, JCM 14150)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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