Name: Imhoffiella bheemlica JA132
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 2473

Type strain:

Species: Imhoffiella bheemlica

Strain Designation: JA132

Culture col. no.: DSM 18805, ATCC BAA-1362, JCM 14149, MTCC 8120

Strain history: Ch. Sasikala JA132.

NCBI tax ID(s): 390878 (species)

SI-ID 319399

ATCC BAA-1362, JCM 14149, DSM 18805

Section

Imhoffiella bheemlica JA132 is an obligate anaerobe, mesophilic, Gram-negative bacterium that was isolated from anoxic sediment from a marine aquaculture pond.

coccus-shaped
Gram-negative
motile
mesophilic
obligate anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Chromatiales*
	Family	*Chromatiaceae*
	Genus	*Imhoffiella*
	Species	**Imhoffiella bheemlica**
	Full Scientific Name (LPSN)	Imhoffiella bheemlica (Anil Kumar et al. 2007) Nupur et al. 2017

Synonym

Thiorhodococcus bheemlicus

Information on morphological and physiological properties Morphology

[Ref.: #32051]	Gram stain	negative

[Ref.: #32051]	Cell width	0.5 µm

[Ref.: #32051]	Cell shape	coccus-shaped

[Ref.: #32051]	Motility	yes

[Ref.: #32051]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #32051]			optimum	27.5 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #32051]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #32051]			optimum	7.1
[Ref.: #32051]			growth	6.5-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7639]	Oxygen tolerance	obligate anaerobe
[Ref.: #32051]	Oxygen tolerance	anaerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32051]		NaCl		growth	0.5-6.0	%
[Ref.: #32051]		NaCl		optimum	2	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32051]	acetate ChEBI	+	carbon source
[Ref.: #32051]	glucose ChEBI	+	carbon source
[Ref.: #32051]	glycerol ChEBI	+	carbon source
[Ref.: #32051]	lactate ChEBI	+	carbon source
[Ref.: #32051]	pyruvate ChEBI	+	carbon source
[Ref.: #32051]	valerate ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7639]	Sample type/isolated from	anoxic sediment from a marine aquaculture pond
[Ref.: #7639]	Geographic location (country and/or sea, region)	Visakhapatnam, Bheemli (17° 54' N, 83° 27' E)
[Ref.: #7639]	Country	India
[Ref.: #7639]	Country ISO 3 Code	IND
[Ref.: #7639]	Continent	Asia
[Ref.: #7639]	Geographic location	17.9000°/83.4500°

[Ref.: #67770]	Sample type/isolated from	Marine aquaculture pond
[Ref.: #67770]	Geographic location (country and/or sea, region)	Bheemli, Visakhapatnam
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Aquaculture
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM282559 (>99% sequence identity) for Imhoffiella from Microbeatlas

Aquatic Samples	87
Soil Samples	17
Animal Samples	4
Plant Samples
Total Samples	108

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7639]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7639]	Thiorhodococcus bheemlicus 16S rRNA gene, type strain JA132T	AM282559	1460	ENA	390878 tax ID

[Ref.: #7639]	GC-content	65.5 mol%	high performance liquid chromatography (HPLC)
[Ref.: #32051]	GC-content	65.5 mol%

Availability in culture collections External links

[Ref.: #7639]

Culture collection no.

DSM 18805, ATCC BAA-1362, JCM 14149, MTCC 8120

[Ref.: #72015]

SI-ID 319399

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Imhoffiella gen. nov., a marine phototrophic member of the family Chromatiaceae including the description of Imhoffiella purpurea sp. nov. and the reclassification of Thiorhodococcus bheemlicus Anil Kumar et al. 2007 as Imhoffiella bheemlica comb. nov.	Nupur N, Saini MK, Singh PK, Korpole S, Srinivas Tanuku NR, Takaichi S, Pinnaka AK	Int J Syst Evol Microbiol	10.1099/ijsem.0.001891	2017	*
Phylogeny	Two novel species of marine phototrophic Gammaproteobacteria: Thiorhodococcus bheemlicus sp. nov. and Thiorhodococcus kakinadensis sp. nov.	Anil Kumar P, Sasi Jyothsna TS, Srinivas TNR, Sasikala C, Ramana CV, Imhoff JF	Int J Syst Evol Microbiol	10.1099/ijs.0.64880-0	2007	*

References

#7639

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18805

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32051

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28301 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#72015

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID319399.1 )

#28301

IJSEM 2458 2007 ( DOI 10.1099/ijs.0.64880-0 , PubMed 17978199 )

* These data were automatically processed and therefore are not curated

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