Actinopolyspora righensis (DSM 45501, CCUG 63368, MTCC 11562)

Name: Actinopolyspora righensis (DSM 45501, CCUG 63368, MTCC 11562)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24731

Type strain

Strain Designation H23

Culture col. no. DSM 45501 CCUG 63368 MTCC 11562 H23

NCBI tax ID(s) 995060

Special Collections DSMZ CCUG

Links

Actinopolyspora righensis H23 is an aerobe, mesophilic prokaryote that was isolated from moderately saline soil.

aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 407034

DSM 45501,CCUG 63368

@ref 20215

Last LPSN update 2025-12-16 09:52:55

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Actinopolyspora

Species Actinopolyspora righensis

Full scientific name Actinopolyspora righensis Meklat et al. 2014

Synonyms (1)

Actinopolyspora lacussalsi subsp. righensis

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	93.7
125438	positive	91.027

Colony morphology

62970

Incubation period20-25 days

Multimedia

@ref:	20253
multimedia content:	DSM_45501.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45501.jpg
caption:	Medium 1240 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
20253	NUTRIMENT AGAR WITH 150G/L NACL (DSMZ Medium 1258)	Medium recipe at MediaDive	Name: NUTRIMENT AGAR WITH 150 G/L NACL (DSMZ Medium 1258) Composition: NaCl 150.0 g/l Agar 20.0 g/l Peptone 5.0 g/l Yeast extract 2.0 g/l Meat extract 1.0 g/l Distilled water
20253	STARCH-MINERAL SALT-AGAR (STMS) + 10%NACL (DSMZ Medium 1240)	Medium recipe at MediaDive	Name: STARCH-MINERAL SALT-AGAR + 10% NACL (DSMZ Medium 1240) Composition: NaCl 100.0 g/l Agar 15.0 g/l Starch 10.0 g/l (NH4)2SO4 2.0 g/l CaCO3 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 1.0 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l ZnSO4 x 7 H2O 0.001 g/l Distilled water
20253	CM + YE MEDIUM (DSMZ Medium 549)	Medium recipe at MediaDive	Name: CM + YE MEDIUM (DSMZ Medium 549) Composition: NaCl 200.0 g/l MgSO4 x 7 H2O 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Casamino acids 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O 0.01 g/l HCl 3.646e-05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
20253	positive	growth	28	mesophilic
62970	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
62970	aerobe
125439	obligate aerobe	90.2

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Condition	#Saline	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
20253	moderately saline soil		Sahara, OuedRigh region, El-Oued	Algeria	DZA	Africa
62970	Soil,Sahara desert	2006	south,Djamâa	Algeria	DZA	Africa

Taxonmaps

69479

Global distribution of 16S sequence HQ918196 (>99% sequence identity) for Actinopolyspora righensis from Microbeatlas

Aquatic Samples
Soil Samples	1
Animal Samples
Plant Samples
Total Samples	1

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20253	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2616644808 annotated assembly for Actinopolyspora righensis DSM 45501	scaffold	GCA_900116555	995060.3	2616644808	995060	72.46

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20253	Actinopolyspora righensis strain H23 16S ribosomal RNA gene, partial sequence	HQ918196	1367		995060

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Actinopolyspora righensis DSM 45501
NCBI: GCA_900116555

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	54.70	no
125439	motility	BacteriaNetⓘ	no	85.40	no
125439	gram_stain	BacteriaNetⓘ	positive	93.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	90.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinopolyspora righensis DSM 45501
NCBI: GCA_900116555.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.03	no
125438	anaerobic	anaerobicⓘ	no	96.16	yes
125438	aerobic	aerobicⓘ	yes	87.18	yes
125438	spore-forming	spore-formingⓘ	yes	81.83	no
125438	thermophilic	thermophileⓘ	no	91.52	no
125438	flagellated	motile2+ⓘ	no	89.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Validation list no. 225: valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006863	2025
Enzymology	Whole-genome sequencing of two Streptomyces strains isolated from the sand dunes of Sahara.	Zerouki C, Bensalah F, Kuittinen S, Pappinen A, Turunen O.	BMC Genomics	10.1186/s12864-021-07866-x	2021
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
Genetics	Genome-based reclassification of Actinopolyspora righensis Meklat et al. 2013 as a later heterotypic synonym of Actinopolyspora lacussalsi Guan et al. 2013 and description of Actinopolyspora lacussalsi subsp. lacussalsi subsp. nov. and Actinopolyspora lacussalsi subsp. righensis subsp. nov.	Saker R, Bouras N, Meklat A, Holtz MD, Klenk HP, Nouioui I.	Arch Microbiol	10.1007/s00203-022-03120-4	2022
Phylogeny	Actinopolyspora salinaria sp. nov., a halophilic actinomycete isolated from solar saltern soil.	Duangmal K, Suksaard P, Pathom-Aree W, Mingma R, Matsumoto A, Takahashi Y.	Int J Syst Evol Microbiol	10.1099/ijsem.0.000926	2016
Phylogeny	Actinopolyspora righensis sp. nov., a novel halophilic actinomycete isolated from Saharan soil in Algeria.	Meklat A, Bouras N, Zitouni A, Mathieu F, Lebrihi A, Schumann P, Sproer C, Klenk HP, Sabaou N	Antonie Van Leeuwenhoek	10.1007/s10482-013-9948-7	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20253	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45501
#62970	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 63368
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Actinopolyspora righensis (DSM 45501, CCUG 63368, MTCC 11562)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900116555

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media