Name: Marichromatium bheemlicum JA124
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 2452

Type strain:

Species: Marichromatium bheemlicum

Strain Designation: JA124

Culture col. no.: DSM 18632, ATCC BAA-1316, JCM 13911, CIP 109646

Strain history: Ch. Sasikala JA124.

NCBI tax ID(s): 365339 (species)

SI-ID 298306

ATCC BAA-1316, DSM 18632, JCM 13911, CIP 109646

Special Collections

Section

Marichromatium bheemlicum JA124 is an obligate anaerobe, Gram-negative bacterium that was isolated from marine aquaculture pond near Bheemli.

Gram-negative
obligate anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Chromatiales*
	Family	*Chromatiaceae*
	Genus	*Marichromatium*
	Species	**Marichromatium bheemlicum**
	Full Scientific Name (LPSN)	Marichromatium bheemlicum Anil Kumar et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.494

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7631]

Oxygen tolerance

obligate anaerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7631]	Sample type/isolated from	marine aquaculture pond near Bheemli
[Ref.: #7631]	Geographic location (country and/or sea, region)	Bay of Bengal, Visakhapatnam
[Ref.: #7631]	Country	India
[Ref.: #7631]	Country ISO 3 Code	IND
[Ref.: #7631]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Marine aquaculture pond near Bheemli
[Ref.: #67770]	Geographic location (country and/or sea, region)	Visakhapatnam
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Aquaculture
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Pond (small)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7631]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7631]	Marichromatium bheemlicum 16S rRNA gene, type strain JA124	AM180952	1438	GenBank ENA	365339 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marichromatium bheemlicum DSM 18632	GCA_012276755	contig	GenBank ENA	365339 tax ID
[Ref.: #66792]	Marichromatium bheemlicum strain DSM 18632	365339.3	wgs	PATRIC	365339 tax ID	*

[Ref.: #7631]	GC-content	67.0 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	67 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Marichromatium bheemlicum strain DSM 18632 PATRIC: 365339.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Marichromatium bheemlicum strain DSM 18632 PATRIC: 365339.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	99.494	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	71.342	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	88.209	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	78.389	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.776	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	79.836	no

Availability in culture collections External links

[Ref.: #7631]

Culture collection no.

DSM 18632, ATCC BAA-1316, JCM 13911, CIP 109646

[Ref.: #71996]

SI-ID 298306

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marichromatium bheemlicum sp. nov., a non-diazotrophic, photosynthetic gammaproteobacterium from a marine aquaculture pond.	Kumar PA, Jyothsna TSS, Srinivas TNR, Sasikala C, Ramana CV, Imhoff JF	Int J Syst Evol Microbiol	10.1099/ijs.0.64753-0	2007	*

References

#7631

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18632

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71996

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID298306.1 )

* These data were automatically processed and therefore are not curated

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Marichromatium bheemlicum strain DSM 18632

Marichromatium bheemlicum strain DSM 18632

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