Nocardia kroppenstedtii (DSM 45810, NCTC 13617, N1286)

Name: Nocardia kroppenstedtii (DSM 45810, NCTC 13617, N1286)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24241

Type strain

Strain Designation N1286

Culture col. no. DSM 45810 NCTC 13617 N1286

NCBI tax ID(s) 341199

Special Collections DSMZ Wink compendium

History <- A. Jones, Northumbria University, Newcastle Upon Tyne, United Kingdom; N1286

Links

Nocardia kroppenstedtii N1286 is a mesophilic prokaryote that was isolated from bronchial lavage from a lung transplant patient with a pulmonary infection.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 405740

NCTC 13617,DSM 45810

@ref 20215

Last LPSN update 2026-02-09 11:23:56

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Nocardia

Species Nocardia kroppenstedtii

Full scientific name Nocardia kroppenstedtii Jones et al. 2014

Morphology

Colony morphology

@ref	Colony color	Medium used
69443	Beige (1001)	ISP 2
69443	Beige (1001)	ISP 6
69443	Light ivory (1014)	ISP 4
69443	Light ivory (1015)	suter with tyrosine
69443	Light ivory (1015)	suter without tyrosine
69443	Oyster white (1013)	ISP 3
69443	Oyster white (1013)	ISP 5
69443	Oyster white (1013)	ISP 7

Multicellular morphology

@ref	Complex name	Medium name
69443	Aerial mycelium	ISP 2
69443	Aerial mycelium	ISP 3
69443	Aerial mycelium	ISP 4
69443	Aerial mycelium	ISP 5
69443	Aerial mycelium	ISP 6
69443	Aerial mycelium	ISP 7
69443	Aerial mycelium	suter with tyrosine
69443	Aerial mycelium	suter without tyrosine

Pigmentation

@ref	Production	Name
69443		melanin pigment
69443		soluble pigment

Multimedia

@ref:	20679
multimedia content:	DSM_45810.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45810.jpg
caption:	Medium 535 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

@ref:	69443
multimedia content:	DSM_45810_image3.jpeg
multimedia.multimedia content:	DSM_45810_image3.jpeg
caption:	Plates (535, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

@ref:	69443
multimedia content:	DSM_45810_image4.jpeg
multimedia.multimedia content:	DSM_45810_image4.jpeg
caption:	Plates (535, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20679	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
20679	positive	growth	28	mesophilic

Physiology and metabolism

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69443	NaCl	positive	growth	0-10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
69443	22599 ChEBI	arabinose	-	growth
69443	62968 ChEBI	cellulose	+/-	growth
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
69443	28757 ChEBI	fructose	+	growth
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
69443	17234 ChEBI	glucose	+	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69443	17268 ChEBI	inositol	-	growth
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69443	37684 ChEBI	mannose	-	growth
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
69443	16634 ChEBI	raffinose	-	growth
69443	26546 ChEBI	rhamnose	+	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
69443	17992 ChEBI	sucrose	-	growth
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
69443	18222 ChEBI	xylose	-	growth

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68379	gelatinase	-		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68379	pyrazinamidase	+	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68379	urease	-	3.5.1.5	from API Coryne
68382	valine arylamidase	+		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69443	-	+	+	+	-	-	-	-	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69443	not determinedn.d.	-	-	-	+/-	+	+	+	+/-	-	+	+	-	+/-	-	+	+	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Disease	-
#Host Body-Site	#Oral cavity and airways	-
#Host Body Product	#Oral cavity and Airways	#Bronchial wash

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
20679	bronchial lavage from a lung transplant patient with a pulmonary infection	United Kingdom	GBR	Europe

Taxonmaps

69479

Global distribution of 16S sequence DQ157924 (>99% sequence identity) for Nocardia from Microbeatlas

Aquatic Samples	189
Soil Samples	406
Animal Samples	365
Plant Samples	95
Total Samples	1055

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
20679	2	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20679	Nocardia kroppenstedtii strain N1286 16S ribosomal RNA gene, partial sequence	DQ157924	1544		341199

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Nocardia panacis sp. nov., a novel actinomycete with antiphytopathogen activity isolated from the rhizosphere of Panax notoginseng.	Hu JY, Li L, Peng G, Li YQ, Xu LH, Guan HL, Zhao LX, Miao CP	Antonie Van Leeuwenhoek	10.1007/s10482-019-01326-z	2019
Phylogeny	Nocardia kroppenstedtii sp. nov., an actinomycete isolated from a lung transplant patient with a pulmonary infection.	Jones AL, Fisher AJ, Mahida R, Gould K, Perry JD, Hannan MM, Judge EP, Brown R, Boagey K, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijs.0.048330-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20679	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45810
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69443	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Nocardia kroppenstedtii (DSM 45810, NCTC 13617, N1286)

Name and taxonomic classification

Morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Halophily

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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