Halarchaeum solikamskense (DSM 26612, VKPM B-11282, RS94)

Name: Halarchaeum solikamskense (DSM 26612, VKPM B-11282, RS94)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 24086

Type strain

Strain Designation RS94

Culture col. no. DSM 26612 VKPM B-11282 RS94

NCBI tax ID(s) 489913

Special Collections DSMZ

History DSMZ <- B. Kuznetsov, Russian Academy of Sciences, Centre Bioeng., Moscow; RS94 <- A.I. Saralov, IEGM

Links

Halarchaeum solikamskense RS94 is an archaeon that was isolated from foamy products of flotation enrichment of potassium minerals.

genome sequence 16S sequence Archaea

Name and taxonomic classification

SI-ID 396932

DSM 26612

@ref 20215

Last LPSN update 2026-05-29 08:30:33

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Halobacteriaceae

Genus Halarchaeum

Species Halarchaeum solikamskense

Full scientific name Halarchaeum solikamskense Saralov et al. 2014

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21213	HALARCHAEUM MEDIUM RS94 (DSMZ Medium 1483)		Medium recipe at MediaDive	Name: HALARCHAEUM MEDIUM RS94 (DSMZ Medium 1483) Composition: NaCl 200.0 g/l MgCl2 x 6 H2O 25.0 g/l Agar 20.0 g/l K2SO4 5.0 g/l Na pyruvate 2.0 g/l Casein hydrolysate 2.0 g/l Yeast extract 1.0 g/l Na acetate 0.5 g/l Na malate 0.5 g/l Tryptone 0.5 g/l Glucose 0.5 g/l Na2HPO4 x 12 H2O 0.4 g/l NaH2PO4 x 2 H2O 0.2 g/l CaCl2 x 2 H2O 0.1 g/l EDTA 0.005 g/l FeSO4 x 7 H2O 0.0022 g/l CoCl2 x 6 H2O 0.0002 g/l ZnSO4 x 7 H2O 0.0001 g/l Na2MoO4 x 2 H2O 3e-05 g/l CuCl2 x 2 H2O 3e-05 g/l MnCl2 x 4 H2O 3e-05 g/l H3BO3 3e-05 g/l NiCl2 x 6 H2O 3e-05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
21213	positive	growth	35-50

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		92.339

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Industrial production
#Environmental	#Aquatic	#Foam
#Environmental	#Terrestrial	#Geologic

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
21213	foamy products of flotation enrichment of potassium minerals	Ural region, Solikamsk	Russia	RUS	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21213	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1787469v1 assembly for Halarchaeum nitratireducens DSM 26612	contig	GCA_017874695	1073081.3	2913477690	1073081	70.09

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21213	Haloarchaeum solikamskense strain RS94 16S ribosomal RNA gene, partial sequence	JN227878	1448		1073081
124043	Halarchaeum solikamskense gene for 16S ribosomal RNA, partial sequence, strain: DSM 26612.	LC055785	1475		1073081

GC content

@ref	GC-content (mol%)	Method
21213	66.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1787469v1 assembly for Halarchaeum nitratireducens DSM 26612
NCBI: GCA_017874695

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	89.63	no
125439	gram_stain	BacteriaNetⓘ	positive	57.56	no
125439	spore_formation	BacteriaNetⓘ	no	92.34	no
125439	motility	BacteriaNetⓘ	yes	51.45	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Assessing the metabolism, phylogenomic, and taxonomic classification of the halophilic genus Halarchaeum.	Wang S, Narsing Rao MP, Quadri SR.	FEMS Microbiol Lett	10.1093/femsle/fnae001	2024

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21213	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26612
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Halarchaeum solikamskense (DSM 26612, VKPM B-11282, RS94)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_017874695

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media