Name: Streptomonospora sediminis DSM 45723
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 23167

Type strain:

Species: Streptomonospora sediminis

Culture col. no.: DSM 45723, CCTCC AB 2012051, YIM M11335, JCM 31080

Strain history: CCTCC AB 2012051 <-- W.-J. Li; Yunnan Inst. of Microbiol., Yunnan Univ., China; YIM M11335.

NCBI tax ID(s): 1323732 (species)

Section

Streptomonospora sediminis DSM 45723 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from marine sediment.

Gram-positive
rod-shaped
spore-forming
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Streptomonospora*
	Species	**Streptomonospora sediminis**
	Full Scientific Name (LPSN)	Streptomonospora sediminis Zhang et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #31121]	Gram stain	positive

[Ref.: #31121]	Cell shape	rod-shaped

[Ref.: #31121]	Motility	no

[Ref.: #31121]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #31121]	growth	15-45 °C
[Ref.: #31121]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #31121]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31121]			optimum	7.5
[Ref.: #31121]			growth	6.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31121]

Oxygen tolerance

aerobe

[Ref.: #31121]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31121]		NaCl		growth	0-20	%
[Ref.: #31121]		NaCl		optimum	3.5	%

[Ref.: #31121]	Observation	aggregates in chains
[Ref.: #67770]	Observation	quinones: MK-11(H₆), MK-10(H₆)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31121]	alanine ChEBI	+	carbon source
[Ref.: #31121]	arginine ChEBI	+	carbon source
[Ref.: #31121]	aspartate ChEBI	+	carbon source
[Ref.: #31121]	D-tryptophan ChEBI	+	carbon source
[Ref.: #31121]	glutamate ChEBI	+	carbon source
[Ref.: #31121]	nitrate ChEBI	+	reduction
[Ref.: #31121]	phenylalanine ChEBI	+	carbon source
[Ref.: #31121]	threonine ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #31121]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18927]	Sample type/isolated from	marine sediment
[Ref.: #18927]	Geographic location (country and/or sea, region)	Indian Ocean, Little Andaman, Naval area (92° 34.150' E 10° 34.783' N)
[Ref.: #18927]	Country	India
[Ref.: #18927]	Country ISO 3 Code	IND
[Ref.: #18927]	Continent	Asia
[Ref.: #18927]	Geographic location	10.5797°/92.5692°

[Ref.: #67770]	Sample type/isolated from	Marine sediment in Naval area
[Ref.: #67770]	Geographic location (country and/or sea, region)	Little Andaman
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC768773 (>99% sequence identity) for Streptomonospora sediminis subclade from Microbeatlas

Aquatic Samples
Soil Samples	1
Animal Samples	7
Plant Samples
Total Samples	8

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18927]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18927]	Streptomonospora sediminis strain YIM M11335 16S ribosomal RNA gene, partial sequence	KC768773	1540	ENA	1323732 tax ID

[Ref.: #18927]	GC-content	70.7 mol%	high performance liquid chromatography (HPLC)
[Ref.: #31121]	GC-content	70.7 mol%

Availability in culture collections External links

[Ref.: #18927]

Culture collection no.

DSM 45723, CCTCC AB 2012051, YIM M11335, JCM 31080

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomonospora litoralis sp. nov., a halophilic thiopeptides producer isolated from sand collected at Cuxhaven beach.	Khodamoradi S, Hahnke RL, Mast Y, Schumann P, Kampfer P, Steinert M, Ruckert C, Surup F, Rohde M, Wink J	Antonie Van Leeuwenhoek	10.1007/s10482-021-01609-4	2021	*
Phylogeny	Description of Streptomonospora sediminis sp. nov. and Streptomonospora nanhaiensis sp. nov., and reclassification of Nocardiopsis arabia Hozzein & Goodfellow 2008 as Streptomonospora arabica comb. nov. and emended description of the genus Streptomonospora.	Zhang DF, Pan HQ, He J, Zhang XM, Zhang YG, Klenk HP, Hu JC, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.052704-0	2013	*

References

#18927

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45723

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31121

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27450 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#27450

IJSEM 4447 2013 ( DOI 10.1099/ijs.0.052704-0 , PubMed 23847283 )

* These data were automatically processed and therefore are not curated

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