Brevundimonas intermedia (DSM 4732, ATCC 15262, CB 63)

Name: Brevundimonas intermedia (DSM 4732, ATCC 15262, CB 63)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2304

Type strain

Strain Designation CB 63

Culture col. no. DSM 4732 ATCC 15262 CB 63 CIP 106444 KCTC 12440

NCBI tax ID(s) 74315

Special Collections DSMZ KCTC CIP

Links

Brevundimonas intermedia CB 63 is an obligate aerobe, mesophilic, Gram-negative prokaryote that was isolated from pond water.

Gram-negative motile rod-shaped obligate aerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 11939

LMG 18361,ATCC 15262,DSM 4732,CIP 106444,VKM B-1499,CECT 834,CCUG 45022,CCUG 48878,KCTC 12440

@ref 20215

Last LPSN update 2025-12-16 09:47:17

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Caulobacterales

Family Caulobacteraceae

Genus Brevundimonas

Species Brevundimonas intermedia

Full scientific name Brevundimonas intermedia (Poindexter 1964) Abraham et al. 1999

Synonyms (1)

Caulobacter intermedius

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
120143	negative	rod-shaped

Pigmentation

@ref	Production	Name
120143		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1738	CAULOBACTER MEDIUM (DSMZ Medium 595)	Medium recipe at MediaDive	Name: CAULOBACTER MEDIUM (DSMZ Medium 595) Composition: Agar 15.0 g/l Bacto peptone 2.0 g/l Yeast extract 1.0 g/l MgSO4 x 7 H2O 0.2 g/l Tap water
38677	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
120143	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1738	positive	growth	30	mesophilic
38677	positive	growth	30	mesophilic
120143	positive	growth	5-30
120143	negative	growth	37
120143	negative	growth	41

Physiology and metabolism

Oxygen tolerance

120143

Oxygen toleranceobligate aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
120143	NaCl	positive	growth	0-4 %
120143	NaCl		growth	6 %
120143	NaCl		growth	8 %
120143	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
120143	16947 ChEBI	citrate	-	carbon source
120143	4853 ChEBI	esculin	+	hydrolysis
120143	17632 ChEBI	nitrate	-	reduction
120143	17632 ChEBI	nitrate	-	respiration
120143	16301 ChEBI	nitrite	-	reduction

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
120143	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
120143	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
120143	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
120143	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
120143	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120143	caseinase	-	3.4.21.50
120143	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
120143	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120143	gelatinase	-
120143	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
120143	lipase	-
68382	lipase (C 14)	-		from API zym
120143	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120143	ornithine decarboxylase	-	4.1.1.17
120143	oxidase	+
120143	protease	-
68382	trypsin	+	3.4.21.4	from API zym
120143	tryptophan deaminase	-
120143	tween esterase	+
120143	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120143	-	+	+	+	-	+	+	-	+	+	+	+	-	+	-	+	+	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120143	not determinedn.d.	+	-	+	-	+	-	+	-	-	+	+	-	-	-	-	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	+	+	-	+	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Pond (small)

Isolation

@ref	Sample type
1738	pond water
120143	Environment, Pond water

Taxonmaps

69479

Global distribution of 16S sequence AJ007802 (>99% sequence identity) for Brevundimonas from Microbeatlas

Aquatic Samples	4334
Soil Samples	1940
Animal Samples	9723
Plant Samples	5191
Total Samples	21188

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1738	1	Risk group (German classification) According to TRBA 466
120143	1	Risk group (French classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Brevundimonas intermedia gene for 16S ribosomal RNA, partial sequence	AB023784	1408	74315
20218	Caulobacter intermedius 16S rRNA gene	AJ007802	1413	74315
20218	Brevundimonas intermedia strain CIP 106444 16S ribosomal RNA gene, partial sequence	EU024138	1260	74315
1738	Brevundimonas intermedia DNA for 16S ribosomal RNA, strain ATCC 15262(T)	AJ227786	1416	74315
124043	Brevundimonas intermedia strain ATCC 15262 16S ribosomal RNA gene, partial sequence.	MW228826	1320	74315

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria.	Mellmann A, Cloud J, Maier T, Keckevoet U, Ramminger I, Iwen P, Dunn J, Hall G, Wilson D, Lasala P, Kostrzewa M, Harmsen D.	J Clin Microbiol	10.1128/jcm.00157-08	2008
Enzymology	High Diversity of beta-Glucosidase-Producing Bacteria and Their Genes Associated with Scleractinian Corals.	Su H, Xiao Z, Yu K, Zhang Q, Lu C, Wang G, Wang Y, Liang J, Huang W, Huang X, Wei F.	Int J Mol Sci	10.3390/ijms22073523	2021
Phylogeny	Brevundimonas albigilva sp. nov., isolated from forest soil.	Pham VHT, Jeong S, Chung S, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.000848	2015
Phylogeny	Brevundimonas basaltis sp. nov., isolated from black sand.	Choi JH, Kim MS, Roh SW, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.013557-0	2009

References

#1738	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4732
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38677	; Curators of the CIP;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120143	Collection of Institut Pasteur ; Curators of the CIP; CIP 106444
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Brevundimonas intermedia (DSM 4732, ATCC 15262, CB 63)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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