Brevundimonas subvibrioides (DSM 4735, ATCC 15264, CCUG 48879)

Name: Brevundimonas subvibrioides (DSM 4735, ATCC 15264, CCUG 48879)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2305

Type strain

Strain Designation CB 81

Culture col. no. DSM 4735 ATCC 15264 CCUG 48879 CIP 106453 LMG 14903 4 more

NCBI tax ID(s) 633149 74313

Special Collections DSMZ CCUG CIP KCTC

History <- ATCC <- J.S. Poindexter, CB 81 CIP <- 2000, W.R. Abraham, GBF, Braunschweig, Germany, Caulobacter subvibrioides <- LMG <- ATCC <- J.L. Stove: strain CB 81

Links

Brevundimonas subvibrioides CB 81 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from pond water.

Gram-negative motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 7895

LMG 14903,ATCC 15264,DSM 4735,CCUG 45023,NBRC 16000,CIP 106453,IFO 16000,VKM B-1503,KCTC 2887,CCUG 48879,KCTC 12442,KCTC 12467,CGMCC 1.3389,VTT E-052920

@ref 20215

Last LPSN update 2025-12-16 09:47:17

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Caulobacterales

Family Caulobacteraceae

Genus Brevundimonas

Species Brevundimonas subvibrioides

Full scientific name Brevundimonas subvibrioides (Poindexter 1964) Abraham et al. 1999

Synonyms (1)

Caulobacter subvibrioides

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
123362	negative	rod-shaped
125439	negative		92.3
125438	negative		99.328

Pigmentation

@ref	Production	Name
123362		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1741	CAULOBACTER MEDIUM (DSMZ Medium 595)	Medium recipe at MediaDive	Name: CAULOBACTER MEDIUM (DSMZ Medium 595) Composition: Agar 15.0 g/l Bacto peptone 2.0 g/l Yeast extract 1.0 g/l MgSO4 x 7 H2O 0.2 g/l Tap water
39530	MEDIUM 341 - for Caulobacter and Brevundimonas		Distilled water make up to (995.000 ml);Magnesium sulphate heptahydrate (0.200 g);Calcium chloride dihydrate (0.100 g);Agar (15.000 g);Yeast extract (1.000 g);Peptone (2.000 g);Vitamin solution - M0655 (5.000 ml)
123362	CIP Medium 341	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1741	positive	growth	30	mesophilic
39530	positive	growth	30	mesophilic
58376	positive	growth	30	mesophilic
123362	positive	growth	25-37	mesophilic
123362	negative	growth	5
123362	negative	growth	10
123362	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
58376	aerobe
125439	obligate aerobe	94.9

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123362	NaCl	positive	growth	0 %
123362	NaCl		growth	2 %
123362	NaCl		growth	4 %
123362	NaCl		growth	6 %
123362	NaCl		growth	8 %
123362	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
123362	16947 ChEBI	citrate	-	carbon source
123362	4853 ChEBI	esculin	+	hydrolysis
123362	17632 ChEBI	nitrate	-	reduction
123362	17632 ChEBI	nitrate	-	respiration
123362	16301 ChEBI	nitrite	-	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123362	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
123362	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123362	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
123362	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123362	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123362	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
123362	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123362	ornithine decarboxylase	-	4.1.1.17
68382	trypsin	+	3.4.21.4	from API zym
123362	tryptophan deaminase	-
123362	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	methylglyoxal degradation	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	formaldehyde oxidation	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	valine metabolism	100	9 of 9
66794	sulfopterin metabolism	100	4 of 4
66794	biotin biosynthesis	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	Entner Doudoroff pathway	100	10 of 10
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	ppGpp biosynthesis	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	cardiolipin biosynthesis	100	7 of 7
66794	suberin monomers biosynthesis	100	2 of 2
66794	ethanol fermentation	100	2 of 2
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	leucine metabolism	92.31	12 of 13
66794	chorismate metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	gluconeogenesis	87.5	7 of 8
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	isoleucine metabolism	87.5	7 of 8
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	citric acid cycle	85.71	12 of 14
66794	photosynthesis	85.71	12 of 14
66794	propanol degradation	85.71	6 of 7
66794	phenylalanine metabolism	84.62	11 of 13
66794	peptidoglycan biosynthesis	80	12 of 15
66794	propionate fermentation	80	8 of 10
66794	phenylacetate degradation (aerobic)	80	4 of 5
66794	gallate degradation	80	4 of 5
66794	glycogen metabolism	80	4 of 5
66794	threonine metabolism	80	8 of 10
66794	cellulose degradation	80	4 of 5
66794	glutathione metabolism	78.57	11 of 14
66794	d-mannose degradation	77.78	7 of 9
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	vitamin B1 metabolism	76.92	10 of 13
66794	alanine metabolism	75.86	22 of 29
66794	acetate fermentation	75	3 of 4
66794	lactate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	pyrimidine metabolism	73.33	33 of 45
66794	metabolism of disaccharids	72.73	8 of 11
66794	proline metabolism	72.73	8 of 11
66794	pentose phosphate pathway	72.73	8 of 11
66794	d-xylose degradation	72.73	8 of 11
66794	purine metabolism	72.34	68 of 94
66794	heme metabolism	71.43	10 of 14
66794	starch degradation	70	7 of 10
66794	methionine metabolism	69.23	18 of 26
66794	glutamate and glutamine metabolism	67.86	19 of 28
66794	acetoin degradation	66.67	2 of 3
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	octane oxidation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	flavin biosynthesis	66.67	10 of 15
66794	cysteine metabolism	66.67	12 of 18
66794	tryptophan metabolism	65.79	25 of 38
66794	isoprenoid biosynthesis	65.38	17 of 26
66794	lipid metabolism	64.52	20 of 31
66794	tyrosine metabolism	64.29	9 of 14
66794	degradation of sugar acids	64	16 of 25
66794	vitamin B6 metabolism	63.64	7 of 11
66794	non-pathway related	63.16	24 of 38
66794	degradation of sugar alcohols	62.5	10 of 16
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	sulfate reduction	61.54	8 of 13
66794	chlorophyll metabolism	61.11	11 of 18
66794	lipoate biosynthesis	60	3 of 5
66794	3-phenylpropionate degradation	60	9 of 15
66794	glycolysis	58.82	10 of 17
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	lysine metabolism	57.14	24 of 42
66794	4-hydroxymandelate degradation	55.56	5 of 9
66794	degradation of hexoses	55.56	10 of 18
66794	histidine metabolism	55.17	16 of 29
66794	arginine metabolism	54.17	13 of 24
66794	pantothenate biosynthesis	50	3 of 6
66794	kanosamine biosynthesis II	50	1 of 2
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	ribulose monophosphate pathway	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	butanoate fermentation	50	2 of 4
66794	selenocysteine biosynthesis	50	3 of 6
66794	ketogluconate metabolism	50	4 of 8
66794	cyclohexanol degradation	50	2 of 4
66794	oxidative phosphorylation	46.15	42 of 91
66794	ascorbate metabolism	45.45	10 of 22
66794	carotenoid biosynthesis	45.45	10 of 22
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	bile acid biosynthesis, neutral pathway	41.18	7 of 17
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	vitamin K metabolism	40	2 of 5
66794	glycine betaine biosynthesis	40	2 of 5
66794	D-cycloserine biosynthesis	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	degradation of pentoses	39.29	11 of 28
66794	urea cycle	38.46	5 of 13
66794	androgen and estrogen metabolism	37.5	6 of 16
66794	phenol degradation	35	7 of 20
66794	IAA biosynthesis	33.33	1 of 3
66794	nitrate assimilation	33.33	3 of 9
66794	enterobactin biosynthesis	33.33	1 of 3
66794	arachidonic acid metabolism	33.33	6 of 18
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	cyanate degradation	33.33	1 of 3
66794	phenylpropanoid biosynthesis	30.77	4 of 13
66794	polyamine pathway	30.43	7 of 23
66794	coenzyme M biosynthesis	30	3 of 10
66794	4-hydroxyphenylacetate degradation	30	3 of 10
66794	toluene degradation	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4
66794	alginate biosynthesis	25	1 of 4

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123362	-	+	+	+	-	+	+	+	+	+	+	+	-	-	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Pond (small)

Isolation

@ref	Sample type
1741	pond water
58376	Pond water
123362	Environment, Pond water

Taxonmaps

69479

Global distribution of 16S sequence AJ227784 (>99% sequence identity) for Brevundimonas subvibrioides from Microbeatlas

Aquatic Samples	151
Soil Samples	142
Animal Samples	502
Plant Samples	85
Total Samples	880

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1741	1	Risk group (German classification) According to TRBA 466
123362	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM14460v1 assembly for Brevundimonas subvibrioides ATCC 15264	complete	GCA_000144605	633149.4	648028010	633149	99.61

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Brevundimonas subvibrioides gene for 16S rRNA, partial sequence, strain: ATCC15264	AB008392	1239	633149
20218	C.subvibrioides (ATCC 15264) 16S rRNA gene	X94470	1431	633149
20218	Caulobacter subvibroidies CB81 16S ribosomal RNA, complete sequence	M83797	1425	69647
1741	Brevundimonas subvibrioides DNA for 16S ribosomal RNA, strain CB81	AJ227784	1416	633149

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Brevundimonas subvibrioides ATCC 15264
PATRIC: 633149.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	88.30	no
125439	motility	BacteriaNetⓘ	yes	57.10	no
125439	gram_stain	BacteriaNetⓘ	negative	92.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Brevundimonas subvibrioides ATCC 15264 ATCC 15264
NCBI: GCA_000144605.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.33	no
125438	anaerobic	anaerobicⓘ	no	97.76	yes
125438	aerobic	aerobicⓘ	yes	85.30	yes
125438	spore-forming	spore-formingⓘ	no	88.29	no
125438	thermophilic	thermophileⓘ	no	96.33	no
125438	flagellated	motile2+ⓘ	yes	62.35	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Circularly assembled genome sequences of Asticcacaulis sp. strain MM231 and Brevundimonas subvibrioides MM232, isolated from a pond at Bielefeld University campus.	Laker B, Schulze T, Reis M, Bormann S-M, Radke G, Klages LJ, Busche T, Wobbe L, Brautigam A, Eisenhut M.	Microbiol Resour Announc	10.1128/mra.00699-24	2024
	Construction of the Whole Genome of Brevundimonas sp. Strain NIBR11: An Exploration of Bacteria Isolated from Algae in the Nakdong River.	Yu M, Park JY, Yu J, Kim JN, Choi A.	Microbiol Resour Announc	10.1128/mra.00087-23	2023
	Safety of the Entomopathogenic Fungus Beauveria bassiana for Wild and Laboratory-Reared Chrysoperla lucasina Strains.	Morda W, Nuvoli MT, Ruiu L.	Insects	10.3390/insects15080576	2024
	In vitro compatibility of Beauveria bassiana strain ATCC 74040 with copper fungicides	Celar FA, Kos K.	J Appl Entomol	10.1111/jen.12743	2020
	Wild Florida mottled ducks demonstrate strong heterogeneity in their humoral innate immune response.	Ayala AJ, Cheng M, Hellinger TA, McBride KM, Webb J, Fanning A, Snyder P, Ferragamo M, Garcia SC, Sterner N, Bischoff KL, Almagro-Moreno S, Ogbunugafor CB.	PLoS One	10.1371/journal.pone.0312653	2025
	Absence of increased genomic variants in the cyanobacterium Chroococcidiopsis exposed to Mars-like conditions outside the space station.	Napoli A, Micheletti D, Pindo M, Larger S, Cestaro A, de Vera JP, Billi D.	Sci Rep	10.1038/s41598-022-12631-5	2022
	Compatibility of Beauveria bassiana with fungicides in vitro and on zucchini plants infested with Trialeurodes vaporariorum	Roberti R, Righini H, Masetti A, Maini S.	Biol Control	10.1016/j.biocontrol.2017.06.006	2017
	DEG 15, an update of the Database of Essential Genes that includes built-in analysis tools.	Luo H, Lin Y, Liu T, Lai FL, Zhang CT, Gao F, Zhang R.	Nucleic Acids Res	10.1093/nar/gkaa917	2021
	Sustainable Management of Tetranychus urticae and Trialeurodes vaporariorum on Tomato and Cucumber Plants Using Rhamnolipids and Essential Oil-Based Biocontrol Agents.	Thomidis T, Damos P.	Insects	10.3390/insects15090720	2024
	Abundance, Characterization and Diversity of Culturable Anoxygenic Phototrophic Bacteria in Manitoban Marshlands.	Messner K, Yurkov V.	Microorganisms	10.3390/microorganisms12051007	2024
Genetics	Conservation of the Essential Genome Among Caulobacter and Brevundimonas Species.	Scott D, Ely B.	Curr Microbiol	10.1007/s00284-015-0964-x	2016
Metabolism	Transcriptional rewiring of the GcrA/CcrM bacterial epigenetic regulatory system in closely related bacteria.	Adhikari S, Erill I, Curtis PD.	PLoS Genet	10.1371/journal.pgen.1009433	2021
	Position preference of essential genes in prokaryotic operons.	Liu T, Luo H, Gao F.	PLoS One	10.1371/journal.pone.0250380	2021
Phylogeny	Genome sequences of eight morphologically diverse Alphaproteobacteria.	Brown PJ, Kysela DT, Buechlein A, Hemmerich C, Brun YV.	J Bacteriol	10.1128/jb.05453-11	2011
Metabolism	Purification and properties of a novel quizalofop-p-ethyl-hydrolyzing esterase involved in quizalofop-p-ethyl degradation by Pseudomonas sp. J-2.	Zhang H, Li M, Li J, Wang G, Liu Y.	Microb Cell Fact	10.1186/s12934-017-0695-8	2017
Genetics	Recent allopolyploid origin of Zygosaccharomyces rouxii strain ATCC 42981.	Gordon JL, Wolfe KH.	Yeast	10.1002/yea.1598	2008
Genetics	DELEAT: gene essentiality prediction and deletion design for bacterial genome reduction.	Solana J, Garrote-Sanchez E, Gil R.	BMC Bioinformatics	10.1186/s12859-021-04348-5	2021
Enzymology	Mitrecin A, an endolysin-like bacteriolytic enzyme from a newly isolated soil streptomycete.	Farris MH, Steinberg AD.	Lett Appl Microbiol	10.1111/lam.12220	2014
Metabolism	Identification and characterization of a novel thermostable pyrethroid-hydrolyzing enzyme isolated through metagenomic approach.	Fan X, Liu X, Huang R, Liu Y.	Microb Cell Fact	10.1186/1475-2859-11-33	2012
Metabolism	ePath: an online database towards comprehensive essential gene annotation for prokaryotes.	Kong X, Zhu B, Stone VN, Ge X, El-Rami FE, Donghai H, Xu P.	Sci Rep	10.1038/s41598-019-49098-w	2019
Enzymology	Distribution and origin of oxygen-dependent and oxygen-independent forms of Mg-protoporphyrin monomethylester cyclase among phototrophic proteobacteria.	Boldareva-Nuianzina EN, Blahova Z, Sobotka R, Koblizek M.	Appl Environ Microbiol	10.1128/aem.00104-13	2013
Metabolism	Identification of essential alphaproteobacterial genes reveals operational variability in conserved developmental and cell cycle systems.	Curtis PD, Brun YV.	Mol Microbiol	10.1111/mmi.12686	2014
Phylogeny	An updated phylogeny of the Alphaproteobacteria reveals that the parasitic Rickettsiales and Holosporales have independent origins.	Munoz-Gomez SA, Hess S, Burger G, Lang BF, Susko E, Slamovits CH, Roger AJ.	Elife	10.7554/elife.42535	2019
Metabolism	Functional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria.	Varaljay VA, Satagopan S, North JA, Witte B, Dourado MN, Anantharaman K, Arbing MA, Hoeft McCann S, Oremland RS, Banfield JF, Wrighton KC, Tabita FR.	Environ Microbiol	10.1111/1462-2920.13138	2016
	An in silico vaccinomics strategy to develop multiepitope vaccine using essential hypothetical protein as a target against Brevundimonas subvibrioides: A combined subtractive proteomics and immunoinformatics approach.	Paul I, Roy A, Sarkar T, Dutta S, Ray S.	Microb Pathog	10.1016/j.micpath.2025.107651	2025
	Bovine milk extracellular vesicles prepared by ultracentrifugation contain microbial mRNAs that do not accumulate in human plasma following milk consumption.	Mumtaz PT, Upadhyaya B, Shu J, Cui J, Zempleni J.	Extracell Vesicles Circ Nucl Acids	10.20517/evcna.2024.84	2025
	The Use of TnSeq to Identify Essential Alphaproteobacterial Genes Reveals Operational Variability in Conserved Developmental and Cell Cycle Systems.	Sharma G, Curtis PD.	Methods Mol Biol	10.1007/978-1-0716-1720-5_14	2022
	Stereoisomer-specific reprogramming of a bacterial flagellin sialyltransferase.	Kint N, Dubois T, Viollier PH.	EMBO J	10.15252/embj.2022112880	2023
	DcaP-Family Porins are Required for Carboxylic Acid Catabolism in Acinetobacter baumannii	Noel H, Winkelman J, Palmer L.	bioRxiv		2025
	Experimental mapping of bacterial fitness landscapes reveals eco-evolutionary fingerprints.	Zhang S, Ying BW.	Sci Rep	10.1038/s41598-025-17103-0	2025
Phylogeny	Microbiome analysis of bile samples in patients with choledocholithiasis and hepatobiliary disorders.	Azimirad M, Sadeghi A, Hosseinkhan N, Mirbagheri SZ, Alebouyeh M.	Germs	10.18683/germs.2023.1390	2023
	Lifecycle of a predatory bacterium vampirizing its prey through the cell envelope and S-layer.	Santin YG, Sogues A, Bourigault Y, Remaut HK, Laloux G.	Nat Commun	10.1038/s41467-024-48042-5	2024
	Engineering Komagataella phaffii for ethylene glycol production from xylose.	Carneiro CVGC, Trichez D, Bergmann JC, Reis VCB, Wagner N, Walther T, Almeida JRM.	AMB Express	10.1186/s13568-024-01795-0	2024
	Microbiome Dysbiosis Is Associated with Castration Resistance and Cancer Stemness in Metastatic Prostate Cancer.	Uzelac M, Xin R, Ongkeko WM.	Int J Mol Sci	10.3390/ijms25063291	2024
Metabolism	Analysis of Brevundimonas subvibrioides Developmental Signaling Systems Reveals Inconsistencies between Phenotypes and c-di-GMP Levels.	Sperling L, Mulero Alegria MD, Kaever V, Curtis PD.	J Bacteriol	10.1128/jb.00447-19	2019
Genetics	The transcriptional regulator CtrA controls gene expression in Alphaproteobacteria phages: Evidence for a lytic deferment pathway.	Mascolo E, Adhikari S, Caruso SM, deCarvalho T, Folch Salvador A, Serra-Sagrista J, Young R, Erill I, Curtis PD.	Front Microbiol	10.3389/fmicb.2022.918015	2022
	Engineering Zymomonas mobilis for the Production of Xylonic Acid from Sugarcane Bagasse Hydrolysate.	Herrera CRJ, Vieira VR, Benoliel T, Carneiro CVGC, De Marco JL, de Moraes LMP, de Almeida JRM, Torres FAG.	Microorganisms	10.3390/microorganisms9071372	2021
Phylogeny	Photosynthesis Is Widely Distributed among Proteobacteria as Demonstrated by the Phylogeny of PufLM Reaction Center Proteins.	Imhoff JF, Rahn T, Kunzel S, Neulinger SC.	Front Microbiol	10.3389/fmicb.2017.02679	2017
	Mapping Protein-Protein Interactions at Birth: Single-Particle Cryo-EM Analysis of a Ribosome-Nascent Globin Complex.	Masse MM, Hutchinson RB, Morgan CE, Allaman HJ, Guan H, Yu EW, Cavagnero S.	ACS Cent Sci	10.1021/acscentsci.3c00777	2024
	Analysis of biofilm and bacterial communities in the towel environment with daily use.	Kato H, Okino N, Kijitori H, Izawa Y, Wada Y, Maki M, Yamamoto T, Yano T.	Sci Rep	10.1038/s41598-023-34501-4	2023
	Characterization and in vitro anticancer potential of exopolysaccharide extracted from a freshwater diatom Nitzschia palea (Kütz.) W.Sm. 1856.	Sanniyasi E, Patrick APR, Rajagopalan K, Gopal RK, Damodharan R.	Sci Rep	10.1038/s41598-022-24662-z	2022
	Upstream CtrA-binding sites both induce and repress pilin gene expression in Caulobacter crescentus.	Rijal A, Johnson ET, Curtis PD.	BMC Genomics	10.1186/s12864-024-10533-6	2024
Genetics	DNA methylation by CcrM contributes to genome maintenance in the Agrobacterium tumefaciens plant pathogen.	Martin S, Fournes F, Ambrosini G, Iseli C, Bojkowska K, Marquis J, Guex N, Collier J.	Nucleic Acids Res	10.1093/nar/gkae757	2024
	Origin of a Core Bacterial Gene via Co-option and Detoxification of a Phage Lysin.	Randich AM, Kysela DT, Morlot C, Brun YV.	Curr Biol	10.1016/j.cub.2019.04.032	2019
	Stalk formation of Brevundimonas and how it compares to Caulobacter crescentus.	Curtis PD.	PLoS One	10.1371/journal.pone.0184063	2017
Pathogenicity	Salivary Microbiota and Host-Inflammatory Responses in Periodontitis Affected Individuals With and Without Rheumatoid Arthritis.	Eriksson K, Lundmark A, Delgado LF, Hu YOO, Fei G, Lee L, Fei C, Catrina AI, Jansson L, Andersson AF, Yucel-Lindberg T.	Front Cell Infect Microbiol	10.3389/fcimb.2022.841139	2022
Metabolism	Essential Genes Predicted in the Genome of Rubrivivax gelatinosus.	Curtis PD.	J Bacteriol	10.1128/jb.00344-16	2016
	Phosphate starvation decouples cell differentiation from DNA replication control in the dimorphic bacterium Caulobacter crescentus.	Hallgren J, Koonce K, Felletti M, Mortier J, Turco E, Jonas K.	PLoS Genet	10.1371/journal.pgen.1010882	2023
Genetics	Heterotrophic Bacteria Dominate Catalase Expression during Microcystis Blooms.	Smith DJ, Berry MA, Cory RM, Johengen TH, Kling GW, Davis TW, Dick GJ.	Appl Environ Microbiol	10.1128/aem.02544-21	2022
Genetics	Metagenomic assembly of new (sub)polar Cyanobacteria and their associated microbiome from non-axenic cultures.	Cornet L, Bertrand AR, Hanikenne M, Javaux EJ, Wilmotte A, Baurain D.	Microb Genom	10.1099/mgen.0.000212	2018
Phylogeny	Phylogeny of Anoxygenic Photosynthesis Based on Sequences of Photosynthetic Reaction Center Proteins and a Key Enzyme in Bacteriochlorophyll Biosynthesis, the Chlorophyllide Reductase.	Imhoff JF, Rahn T, Kunzel S, Neulinger SC.	Microorganisms	10.3390/microorganisms7110576	2019
Phylogeny	Diversity of retrievable heterotrophic bacteria in Kongsfjorden, an Arctic fjord.	Sinha RK, Krishnan KP, Hatha AA, Rahiman M, Thresyamma DD, Kerkar S.	Braz J Microbiol	10.1016/j.bjm.2016.09.011	2017
Phylogeny	Phylogeny and polyphasic taxonomy of Caulobacter species. Proposal of Maricaulis gen. nov. with Maricaulis maris (Poindexter) comb. nov. as the type species, and emended description of the genera Brevundimonas and Caulobacter.	Abraham WR, Strompl C, Meyer H, Lindholst S, Moore ER, Christ R, Vancanneyt M, Tindall BJ, Bennasar A, Smit J, Tesar M.	Int J Syst Bacteriol	10.1099/00207713-49-3-1053	1999
Genetics	In-phase oscillation of global regulons is orchestrated by a pole-specific organizer.	Janakiraman B, Janakiraman B, Mignolet J, Narayanan S, Viollier PH, Radhakrishnan SK.	Proc Natl Acad Sci U S A	10.1073/pnas.1610723113	2016
Genetics	DNA Methylation in Ensifer Species during Free-Living Growth and during Nitrogen-Fixing Symbiosis with Medicago spp.	diCenzo GC, Cangioli L, Nicoud Q, Cheng JHT, Blow MJ, Shapiro N, Woyke T, Biondi EG, Alunni B, Mengoni A, Mergaert P.	mSystems	10.1128/msystems.01092-21	2022
Metabolism	Contact-dependent killing by Caulobacter crescentus via cell surface-associated, glycine zipper proteins.	Garcia-Bayona L, Guo MS, Laub MT.	Elife	10.7554/elife.24869	2017
Metabolism	Nucleoid Size Scaling and Intracellular Organization of Translation across Bacteria.	Gray WT, Govers SK, Xiang Y, Parry BR, Campos M, Kim S, Jacobs-Wagner C.	Cell	10.1016/j.cell.2019.05.017	2019
Metabolism	DNA methylation by CcrM activates the transcription of two genes required for the division of Caulobacter crescentus.	Gonzalez D, Collier J.	Mol Microbiol	10.1111/mmi.12180	2013
Genetics	Metagenomic Analysis from the Interior of a Speleothem in Tjuv-Ante's Cave, Northern Sweden.	Zepeda Mendoza ML, Lundberg J, Ivarsson M, Campos P, Nylander JA, Sallstedt T, Dalen L.	PLoS One	10.1371/journal.pone.0151577	2016
Genetics	A comparison of the Caulobacter NA1000 and K31 genomes reveals extensive genome rearrangements and differences in metabolic potential.	Ash K, Brown T, Watford T, Scott LE, Stephens C, Ely B.	Open Biol	10.1098/rsob.140128	2014
Metabolism	Caulobacter crescentus CdnL is a non-essential RNA polymerase-binding protein whose depletion impairs normal growth and rRNA transcription.	Gallego-Garcia A, Iniesta AA, Gonzalez D, Collier J, Padmanabhan S, Elias-Arnanz M.	Sci Rep	10.1038/srep43240	2017
	Transposon Sequencing of Brucella abortus Uncovers Essential Genes for Growth In Vitro and Inside Macrophages.	Sternon JF, Godessart P, Goncalves de Freitas R, Van der Henst M, Poncin K, Francis N, Willemart K, Christen M, Christen B, Letesson JJ, De Bolle X.	Infect Immun	10.1128/iai.00312-18	2018
Metabolism	Structure and function of a novel LD-carboxypeptidase a involved in peptidoglycan recycling.	Das D, Herve M, Elsliger MA, Kadam RU, Grant JC, Chiu HJ, Knuth MW, Klock HE, Miller MD, Godzik A, Lesley SA, Deacon AM, Mengin-Lecreulx D, Wilson IA.	J Bacteriol	10.1128/jb.00900-13	2013
	Combining Shigella Tn-seq data with gold-standard E. coli gene deletion data suggests rare transitions between essential and non-essential gene functionality.	Freed NE, Bumann D, Silander OK.	BMC Microbiol	10.1186/s12866-016-0818-0	2016
Genetics	A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.	Guo MS, Haakonsen DL, Zeng W, Schumacher MA, Laub MT.	Cell	10.1016/j.cell.2018.08.029	2018
Genetics	Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria.	Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M.	Front Microbiol	10.3389/fmicb.2020.00468	2020
Phylogeny	Reassessment of the phylogenetic position of Caulobacter subvibrioides.	Sly LI, Cahill MM, Majeed K, Jones G	Int J Syst Bacteriol	10.1099/00207713-47-1-211	1997
	Pyomelanin-Producing Brevundimonas vitisensis sp. nov., Isolated From Grape (Vitis vinifera L.).	Jiang L, Jeon D, Kim J, Lee CW, Peng Y, Seo J, Lee JH, Paik JH, Kim CY, Lee J.	Front Microbiol	10.3389/fmicb.2021.733612	2021
	Brevundimonas aurifodinae, sp. nov., an Aerobic Anoxygenic Phototroph Resistant to Metalloid Oxyanions Isolated from Gold Mine Tailings.	Maltman C, Messner K, Kyndt JA, Yurkov V.	Microorganisms	10.3390/microorganisms12112167	2024
Phylogeny	Brevundimonas mongoliensis sp. nov., A Novel Psychrotolerant Bacterium Isolated from Oil-Contaminated Soil.	Chaudhary DK, Kim J	Curr Microbiol	10.1007/s00284-018-1555-4	2018
Phylogeny	Brevundimonas denitrificans sp. nov., a denitrifying bacterium isolated from deep subseafloor sediment.	Tsubouchi T, Koyama S, Mori K, Shimane Y, Usui K, Tokuda M, Tame A, Uematsu K, Maruyama T, Hatada Y	Int J Syst Evol Microbiol	10.1099/ijs.0.067199-0	2014
Phylogeny	Brevundimonas basaltis sp. nov., isolated from black sand.	Choi JH, Kim MS, Roh SW, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.013557-0	2009

References

#1741	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4735
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39530	; Curators of the CIP;
#58376	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 48879
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123362	Collection of Institut Pasteur ; Curators of the CIP; CIP 106453
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Brevundimonas subvibrioides (DSM 4735, ATCC 15264, CCUG 48879)

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Genome browser: GCA_000144605

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