Name: Aerococcus suis 1821/02
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 227

Type strain:

Species: Aerococcus suis

Strain Designation: 1821/02

Culture col. no.: DSM 21500, CCUG 52530, CECT 7139, JCM 18035, CIP 109714

Strain history: CECT 7139 <-- A. I. Vela 1821/02.

NCBI tax ID(s): 371602 (species)

Other strains from Aerococcus suis

A. suis CCUG 53172
A. suis CCUG 53173

Section

Aerococcus suis 1821/02 is a microaerophile, mesophilic, Gram-positive animal pathogen that forms circular colonies and was isolated from swine brain, meningitis.

coccus-shaped
colony-forming
Gram-positive
animal pathogen
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	15-12-2021 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Firmicutes
	Class	Bacilli
	Order	Lactobacillales
	Family	Aerococcaceae
	Genus	Aerococcus
	Species	Aerococcus suis
	Full Scientific Name (PNU)	Aerococcus suis Vela et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #22980]	Gram stain	positive
[Ref.: #22980]	Cell shape	coccus-shaped

[Ref.: #22980]	Type of hemolysis	alpha
[Ref.: #22980]	Colony size	<1.0 mm
[Ref.: #22980]	Colony shape	circular
[Ref.: #22980]	Incubation period	1 day
[Ref.: #22980]	Cultivation medium used	blood agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #15679]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #15679]

Culture medium growth

[Ref.: #15679]

Culture medium link

Medium recipe at BacMedia

[Ref.: #15679]

Culture medium composition

expand / minimize

[Ref.: #22980]

Culture medium

blood agar

[Ref.: #22980]

Culture medium growth

[Ref.: #40647]

Culture medium

MEDIUM 45 - for Columbia agar with sheep blood

[Ref.: #40647]

Culture medium growth

[Ref.: #40647]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #15679]	growth	37 °C
[Ref.: #22980]	growth	37.0 °C
[Ref.: #40647]	growth	30 °C
[Ref.: #59577]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #15679]	Temperature range	mesophilic
[Ref.: #22980]	Temperature range	mesophilic
[Ref.: #40647]	Temperature range	mesophilic
[Ref.: #59577]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #22980]			growth	9.6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #15679]	Oxygen tolerance	microaerophile
[Ref.: #15679]	Oxygen tolerance	aerobe
[Ref.: #22980]	Oxygen tolerance	facultative anaerobe
[Ref.: #59577]	Oxygen tolerance	microaerophile

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #22980]		NaCl		growth	6.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #22980]	2-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #22980]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #22980]	amygdalin ChEBI	-	builds acid from
[Ref.: #22980]	arabinitol ChEBI	-	builds acid from
[Ref.: #22980]	arabinose ChEBI	-	builds acid from
[Ref.: #22980]	arbutin ChEBI	-	builds acid from
[Ref.: #68380]	arginine ChEBI	+	hydrolysis	* from API rID32A
[Ref.: #22980]	cellobiose ChEBI	-	builds acid from
[Ref.: #22980]	cyclodextrin ChEBI	-	builds acid from
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #22980]	D-tagatose ChEBI	+	builds acid from
[Ref.: #22980]	erythritol ChEBI	-	builds acid from
[Ref.: #22980]	esculin ChEBI	-	builds acid from
[Ref.: #22980]	esculin ChEBI	-	hydrolysis
[Ref.: #22980]	fructose ChEBI	-	builds acid from
[Ref.: #22980]	fucose ChEBI	-	builds acid from
[Ref.: #22980]	galactitol ChEBI	-	builds acid from
[Ref.: #22980]	galactose ChEBI	-	builds acid from
[Ref.: #22980]	gentiobiose ChEBI	-	builds acid from
[Ref.: #22980]	glucose ChEBI	-	builds acid from
[Ref.: #22980]	glycerol ChEBI	-	builds acid from
[Ref.: #22980]	glycogen ChEBI	-	builds acid from
[Ref.: #22980]	hippurate ChEBI	-	hydrolysis
[Ref.: #22980]	inulin ChEBI	-	builds acid from
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #22980]	lactose ChEBI	-	builds acid from
[Ref.: #22980]	lyxose ChEBI	-	builds acid from
[Ref.: #22980]	maltose ChEBI	-	builds acid from
[Ref.: #22980]	mannitol ChEBI	-	builds acid from
[Ref.: #22980]	mannose ChEBI	-	builds acid from
[Ref.: #22980]	melezitose ChEBI	-	builds acid from
[Ref.: #22980]	melibiose ChEBI	-	builds acid from
[Ref.: #22980]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #22980]	methyl beta-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #22980]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #22980]	myo-inositol ChEBI	-	builds acid from
[Ref.: #22980]	N-acetylglucosamine ChEBI	-	builds acid from
[Ref.: #22980]	nitrate ChEBI	-	reduction
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #22980]	pullulan ChEBI	-	builds acid from
[Ref.: #22980]	raffinose ChEBI	-	builds acid from
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #22980]	rhamnose ChEBI	-	builds acid from
[Ref.: #22980]	ribitol ChEBI	-	builds acid from
[Ref.: #22980]	ribose ChEBI	+	builds acid from
[Ref.: #22980]	salicin ChEBI	-	builds acid from
[Ref.: #22980]	sorbitol ChEBI	-	builds acid from
[Ref.: #22980]	sorbose ChEBI	-	builds acid from
[Ref.: #22980]	sucrose ChEBI	-	builds acid from
[Ref.: #22980]	trehalose ChEBI	-	builds acid from
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #22980]	turanose ChEBI	-	builds acid from
[Ref.: #22980]	urea ChEBI	+/-	hydrolysis
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #22980]	xylitol ChEBI	-	builds acid from
[Ref.: #22980]	xylose ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite
[Ref.: #22980]		acetoin ChEBI
[Ref.: #68380]		indole ChEBI	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #22980]	acid phosphatase	+	3.1.3.2
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #22980]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A
[Ref.: #22980]	arginine dihydrolase	+	3.5.3.6
[Ref.: #68380]	arginine dihydrolase	+	3.5.3.6	* from API rID32A
[Ref.: #22980]	beta-galactosidase	+	3.2.1.23
[Ref.: #68380]	beta-galactosidase	+	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #22980]	catalase	+/-	1.11.1.6
[Ref.: #22980]	cytochrome oxidase	-	1.9.3.1
[Ref.: #22980]	esterase (C 4)	+
[Ref.: #22980]	esterase lipase (C 8)	+
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	+		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A
[Ref.: #22980]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #15679]	8962	-	+	-	+	-	+/-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	palmitate biosynthesis	81.82	18 of 22
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	pentose phosphate pathway	72.73	8 of 11
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	serine metabolism	66.67	6 of 9
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	pyrimidine metabolism	66.67	30 of 45
[Ref.: #66794]	photosynthesis	64.29	9 of 14
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	NAD metabolism	61.11	11 of 18
[Ref.: #66794]	lipoate biosynthesis	60	3 of 5
[Ref.: #66794]	purine metabolism	59.57	56 of 94
[Ref.: #66794]	non-pathway related	52.63	20 of 38
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	coenzyme A metabolism	50	2 of 4
[Ref.: #66794]	glycogen biosynthesis	50	2 of 4
[Ref.: #66794]	starch degradation	50	5 of 10
[Ref.: #66794]	sulfopterin metabolism	50	2 of 4
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	C4 and CAM-carbon fixation	50	4 of 8
[Ref.: #66794]	glutamate and glutamine metabolism	46.43	13 of 28
[Ref.: #66794]	phenylalanine metabolism	46.15	6 of 13
[Ref.: #66794]	proline metabolism	45.45	5 of 11
[Ref.: #66794]	valine metabolism	44.44	4 of 9
[Ref.: #66794]	glutathione metabolism	42.86	6 of 14
[Ref.: #66794]	ubiquinone biosynthesis	42.86	3 of 7
[Ref.: #66794]	propanol degradation	42.86	3 of 7
[Ref.: #66794]	tetrahydrofolate metabolism	42.86	6 of 14
[Ref.: #66794]	mevalonate metabolism	42.86	3 of 7
[Ref.: #66794]	metabolism of amino sugars and derivatives	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	cysteine metabolism	38.89	7 of 18
[Ref.: #66794]	lipid metabolism	38.71	12 of 31
[Ref.: #66794]	oxidative phosphorylation	38.46	35 of 91
[Ref.: #66794]	isoleucine metabolism	37.5	3 of 8
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	histidine metabolism	34.48	10 of 29
[Ref.: #66794]	alanine metabolism	34.48	10 of 29
[Ref.: #66794]	glycolate and glyoxylate degradation	33.33	2 of 6
[Ref.: #66794]	d-mannose degradation	33.33	3 of 9
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	L-lactaldehyde degradation	33.33	1 of 3
[Ref.: #66794]	lipid A biosynthesis	33.33	3 of 9
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	CO2 fixation in Crenarchaeota	33.33	3 of 9
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	degradation of hexoses	33.33	6 of 18
[Ref.: #66794]	degradation of sugar alcohols	31.25	5 of 16
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	methionine metabolism	30.77	8 of 26
[Ref.: #66794]	arginine metabolism	29.17	7 of 24
[Ref.: #66794]	reductive acetyl coenzyme A pathway	28.57	2 of 7
[Ref.: #66794]	isoprenoid biosynthesis	26.92	7 of 26
[Ref.: #66794]	flavin biosynthesis	26.67	4 of 15
[Ref.: #66794]	tryptophan metabolism	26.32	10 of 38
[Ref.: #66794]	lysine metabolism	26.19	11 of 42
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	leucine metabolism	23.08	3 of 13
[Ref.: #66794]	urea cycle	23.08	3 of 13
[Ref.: #66794]	ascorbate metabolism	22.73	5 of 22
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
[Ref.: #66794]	chorismate metabolism	22.22	2 of 9
[Ref.: #66794]	tyrosine metabolism	21.43	3 of 14
[Ref.: #66794]	heme metabolism	21.43	3 of 14
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #15679]	Sample type/isolated from	swine brain, meningitis
[Ref.: #15679]	Geographic location (country and/or sea, region)	Madrid
[Ref.: #15679]	Country	Spain
[Ref.: #15679]	Country ISO 3 Code	ESP
[Ref.: #15679]	Continent	Europe

[Ref.: #59577]	Sample type/isolated from	Swine brain,meningitis
[Ref.: #59577]	Sampling date	2002
[Ref.: #59577]	Geographic location (country and/or sea, region)	Madrid
[Ref.: #59577]	Country	Spain
[Ref.: #59577]	Country ISO 3 Code	ESP
[Ref.: #59577]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Brain of a pig with meningitis

[Ref.: #22980]	Enrichment culture	Columbia blood agar plates
[Ref.: #22980]	Enrichment culture duration	1 day
[Ref.: #22980]	Enrichment culture temperature	37.0 ̊C

Isolation sources categories

#Infection	#Disease	#Meningitis
#Host	#Mammals	#Suidae (Pig,Swine)
#Host Body-Site	#Organ	#Brain

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #15679]	Pathogenicity (animal)	yes
[Ref.: #15679]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Aerococcus suis strain CCUG 52530 16S-23S ribosomal RNA intergenic spacer, partial sequence	JN977129	222	ENA	371602 tax ID	*
[Ref.: #15679]	Aerococcus suis partial 16S rRNA gene, type strain 1821/02T	AM230658	1332	ENA	371602 tax ID
[Ref.: #67770]	Aerococcus suis JCM 18035 gene for 16S rRNA, partial sequence	LC521974	1488	ENA	371602 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aerococcus suis DSM 21500	GCA_900176325	scaffold	GenBank	371602 tax ID	*
[Ref.: #66792]	Aerococcus suis strain DSM 21500	371602.3	wgs	PATRIC	371602 tax ID	*
[Ref.: #66792]	Aerococcus suis DSM 21500	2622736423	draft	JGI IMG/M	371602 tax ID	*
[Ref.: #67770]	Aerococcus suis strain DSM 21500, whole genome shotgun sequencing project	FWXK00000000		GenBank	371602 tax ID

[Ref.: #15679]	GC-content	37.5 mol%
[Ref.: #67770]	GC-content	37 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	37.5 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #15679]

Culture collection no.

DSM 21500, CCUG 52530, CECT 7139, JCM 18035, CIP 109714

[Ref.: #20218]

Associated Passport(s) in StrainInfo

720501, 720502, 869034

References

#15679

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21500

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22980

A. I. Vela,N. Garcia,M. V. Latre,A. Casamayor,C. Sánchez-Porro,V. Briones,A. Ventosa,L. Domínguez,J. F. Fernandez-Garayzábal: Aerococcus suis sp. nov., isolated from clinical specimens from swine. IJSEM 57: 1291 - 1294 2007 ( DOI 10.1099/ijs.0.64537-0 , PubMed 17551045 )

#40647 ; Curators of the CIP;
#59577 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 52530

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

* These data were automatically processed and therefore are not curated

Change proposal

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