Name: Aerococcus christensenii UW06
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 226

Type strain:

Species: Aerococcus christensenii

Strain Designation: UW06, UW 06

Culture col. no.: DSM 15819, CCM 4911, CCUG 28831, CIP 106115, JCM 18985, ATCC 48849, LMG 19525

Strain history: CIP <- 1999, CCUG <- 1991, L.K. Rabe & S.L. Hillier, Seattle, USA: strain UW 06

NCBI tax ID(s): 525247 (strain), 87541 (species)

SI-ID 13113

LMG 19525, CCUG 28831, CIP 106115, CCM 4911, DSM 15819, ATCC 48849, JCM 18985

Special Collections

Other strains from Aerococcus christensenii

Section

Aerococcus christensenii UW06 is a microaerophile, Gram-positive, coccus-shaped human pathogen that was isolated from human vagina.

coccus-shaped
Gram-positive
human pathogen
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Aerococcaceae*
	Genus	*Aerococcus*
	Species	**Aerococcus christensenii**
	Full Scientific Name (LPSN)	Aerococcus christensenii Collins et al. 1999

Information on morphological and physiological properties Morphology

[Ref.: #22979]	Gram stain	positive
[Ref.: #118258]	Gram stain	positive

[Ref.: #22979]	Cell shape	coccus-shaped
[Ref.: #118258]	Cell shape	coccus-shaped

[Ref.: #22979]	Motility	no
[Ref.: #118258]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %93.979

[Ref.: #22979]	Type of hemolysis	alpha
[Ref.: #22979]	Hemolysis ability	1
[Ref.: #22979]	Cultivation medium used	blood agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6123]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #6123]

Culture medium growth

[Ref.: #6123]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6123]

Culture medium composition

expand / minimize

[Ref.: #6123]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #6123]

Culture medium growth

[Ref.: #6123]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6123]

Culture medium composition

expand / minimize

[Ref.: #36412]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #36412]

Culture medium growth

[Ref.: #36412]

Culture medium composition

expand / minimize

[Ref.: #118258]

Culture medium

CIP Medium 6

[Ref.: #118258]

Culture medium growth

[Ref.: #118258]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #6123]		growth	37 °C
[Ref.: #36412]		growth	30 °C
[Ref.: #49410]		growth	37 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #118258]		growth	30-37 °C
[Ref.: #118258]	no	growth	10 °C
[Ref.: #118258]	no	growth	25 °C
[Ref.: #118258]	no	growth	41 °C
[Ref.: #118258]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #6123]	Oxygen tolerance	microaerophile
[Ref.: #22979]	Oxygen tolerance	facultative anaerobe
[Ref.: #49410]	Oxygen tolerance	anaerobe
[Ref.: #49410]	Oxygen tolerance	microaerophile
[Ref.: #118258]	Oxygen tolerance	facultative anaerobe

[Ref.: #22979]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %99

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #22979]		NaCl		growth	6.5	%

[Ref.: #6123]	Murein short key	A11
[Ref.: #6123]	Murein types	A1alpha L-Lys-direct

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	arginine ChEBI	-	hydrolysis	* from API ID32STA, API rID32STR
[Ref.: #68375]	cellobiose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #22979]	cyclodextrin ChEBI	-	builds acid from
[Ref.: #22979]	D-arabitol ChEBI	-	builds acid from
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	D-fructose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-glucose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68381]	D-mannitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	D-mannitol ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	D-mannose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68381]	D-ribose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	D-ribose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #118258]	esculin ChEBI	-	hydrolysis
[Ref.: #68375]	esculin ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #22979]	glycogen ChEBI	-	builds acid from
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #22979]	hippurate ChEBI	+	hydrolysis
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #22979]	L-arabinose ChEBI	-	builds acid from
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #22979]	lactose ChEBI	-	builds acid from
[Ref.: #68381]	lactose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	lactose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #22979]	maltose ChEBI	-	builds acid from
[Ref.: #68381]	maltose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	maltose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #22979]	mannitol ChEBI	-	builds acid from
[Ref.: #22979]	melezitose ChEBI	-	builds acid from
[Ref.: #22979]	melibiose ChEBI	-	builds acid from
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #22979]	methyl beta-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	N-acetylglucosamine ChEBI	-	fermentation	* from API ID32STA
[Ref.: #118258]	nitrate ChEBI	-	reduction
[Ref.: #68375]	nitrate ChEBI	-	reduction	* from API ID32STA
[Ref.: #118258]	nitrite ChEBI	-	reduction
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #22979]	pullulan ChEBI	-	builds acid from
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #22979]	raffinose ChEBI	-	builds acid from
[Ref.: #68381]	raffinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	raffinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #22979]	ribose ChEBI	-	builds acid from
[Ref.: #22979]	sorbitol ChEBI	-	builds acid from
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #22979]	sucrose ChEBI	-	builds acid from
[Ref.: #68381]	sucrose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	sucrose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #22979]	tagatose ChEBI	-	builds acid from
[Ref.: #22979]	trehalose ChEBI	-	builds acid from
[Ref.: #68381]	trehalose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68375]	trehalose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	turanose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68375]	urea ChEBI	-	hydrolysis	* from API ID32STA, API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #68375]		novobiocin ChEBI	yes	1.8	µg	* from API ID32STA

	Metabolite	Production
[Ref.: #22979]	acetoin ChEBI	no
[Ref.: #118258]	indole ChEBI	no
[Ref.: #68375]	acetoin ChEBI	no	* from API ID32STA, API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #118258]		acetoin ChEBI	-
[Ref.: #68381]		acetoin ChEBI	-	* from API rID32STR, API ID32STA

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	+		* from API rID32STR
[Ref.: #118258]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #22979]	alkaline phosphatase	-	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym, API rID32STR, API ID32STA
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #22979]	alpha-galactosidase	-	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym, API rID32STR
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #22979]	arginine dihydrolase	-	3.5.3.6
[Ref.: #68381]	arginine dihydrolase	-	3.5.3.6	* from API rID32STR, API ID32STA
[Ref.: #22979]	beta-galactosidase	-	3.2.1.23
[Ref.: #118258]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym, API rID32STR, API ID32STA
[Ref.: #22979]	beta-glucosidase	-	3.2.1.21
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym, API rID32STR, API ID32STA
[Ref.: #22979]	beta-glucuronidase	-	3.2.1.31
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API rID32STR, API ID32STA
[Ref.: #22979]	beta-mannosidase	-	3.2.1.25
[Ref.: #68381]	beta-mannosidase	-	3.2.1.25	* from API rID32STR
[Ref.: #22979]	catalase	-	1.11.1.6
[Ref.: #118258]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #22979]	cytochrome oxidase	-	1.9.3.1
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #118258]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #22979]	glycyl tryptophan arylamidase	-
[Ref.: #68381]	glycyl tryptophan arylamidase	-		* from API rID32STR
[Ref.: #68375]	L-arginine arylamidase	+		* from API ID32STA
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #118258]	lysine decarboxylase	-	4.1.1.18
[Ref.: #22979]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API rID32STR
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #118258]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #118258]	oxidase	-
[Ref.: #22979]	pyroglutamic acid arylamidase	-
[Ref.: #68381]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32STR, API ID32STA
[Ref.: #22979]	tripeptide aminopeptidase	-	3.4.11.4
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #22979]	urease	-	3.5.1.5
[Ref.: #118258]	urease	-	3.5.1.5
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR, API ID32STA
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #118258]	1541	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #49410]	1971	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #6123]	10655	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	not determinedn.d.	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #118258]	9261	-	-	-	+	-	-	-	-	-	-	+	+	-	-	-	+	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	peptidoglycan biosynthesis	93.33	14 of 15
[Ref.: #66794]	vitamin B1 metabolism	92.31	12 of 13
[Ref.: #66794]	pentose phosphate pathway	90.91	10 of 11
[Ref.: #66794]	palmitate biosynthesis	81.82	18 of 22
[Ref.: #66794]	degradation of sugar alcohols	81.25	13 of 16
[Ref.: #66794]	starch degradation	80	8 of 10
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	photosynthesis	78.57	11 of 14
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	ppGpp biosynthesis	75	3 of 4
[Ref.: #66794]	NAD metabolism	72.22	13 of 18
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	C4 and CAM-carbon fixation	62.5	5 of 8
[Ref.: #66794]	glycogen metabolism	60	3 of 5
[Ref.: #66794]	ubiquinone biosynthesis	57.14	4 of 7
[Ref.: #66794]	serine metabolism	55.56	5 of 9
[Ref.: #66794]	purine metabolism	55.32	52 of 94
[Ref.: #66794]	oxidative phosphorylation	54.95	50 of 91
[Ref.: #66794]	proline metabolism	54.55	6 of 11
[Ref.: #66794]	pyrimidine metabolism	51.11	23 of 45
[Ref.: #66794]	sulfopterin metabolism	50	2 of 4
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	suberin monomers biosynthesis	50	1 of 2
[Ref.: #66794]	glycogen biosynthesis	50	2 of 4
[Ref.: #66794]	phenylalanine metabolism	46.15	6 of 13
[Ref.: #66794]	non-pathway related	44.74	17 of 38
[Ref.: #66794]	CO2 fixation in Crenarchaeota	44.44	4 of 9
[Ref.: #66794]	d-mannose degradation	44.44	4 of 9
[Ref.: #66794]	citric acid cycle	42.86	6 of 14
[Ref.: #66794]	mevalonate metabolism	42.86	3 of 7
[Ref.: #66794]	methionine metabolism	42.31	11 of 26
[Ref.: #66794]	lipid metabolism	41.94	13 of 31
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	methylglyoxal degradation	40	2 of 5
[Ref.: #66794]	glutamate and glutamine metabolism	39.29	11 of 28
[Ref.: #66794]	alanine metabolism	37.93	11 of 29
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
[Ref.: #66794]	ketogluconate metabolism	37.5	3 of 8
[Ref.: #66794]	isoleucine metabolism	37.5	3 of 8
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	tetrahydrofolate metabolism	35.71	5 of 14
[Ref.: #66794]	degradation of pentoses	35.71	10 of 28
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	allantoin degradation	33.33	3 of 9
[Ref.: #66794]	formaldehyde oxidation	33.33	1 of 3
[Ref.: #66794]	lipid A biosynthesis	33.33	3 of 9
[Ref.: #66794]	cysteine metabolism	33.33	6 of 18
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	L-lactaldehyde degradation	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	sulfate reduction	30.77	4 of 13
[Ref.: #66794]	isoprenoid biosynthesis	30.77	8 of 26
[Ref.: #66794]	glycine metabolism	30	3 of 10
[Ref.: #66794]	arginine metabolism	29.17	7 of 24
[Ref.: #66794]	reductive acetyl coenzyme A pathway	28.57	2 of 7
[Ref.: #66794]	propanol degradation	28.57	2 of 7
[Ref.: #66794]	degradation of hexoses	27.78	5 of 18
[Ref.: #66794]	histidine metabolism	27.59	8 of 29
[Ref.: #66794]	ascorbate metabolism	27.27	6 of 22
[Ref.: #66794]	vitamin B6 metabolism	27.27	3 of 11
[Ref.: #66794]	flavin biosynthesis	26.67	4 of 15
[Ref.: #66794]	tryptophan metabolism	26.32	10 of 38
[Ref.: #66794]	lysine metabolism	26.19	11 of 42
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	gluconeogenesis	25	2 of 8
[Ref.: #66794]	vitamin E metabolism	25	1 of 4
[Ref.: #66794]	urea cycle	23.08	3 of 13
[Ref.: #66794]	leucine metabolism	23.08	3 of 13
[Ref.: #66794]	valine metabolism	22.22	2 of 9
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
[Ref.: #66794]	glutathione metabolism	21.43	3 of 14
[Ref.: #66794]	tyrosine metabolism	21.43	3 of 14
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6123]	Sample type/isolated from	human vagina
[Ref.: #6123]	Geographic location (country and/or sea, region)	Seattle
[Ref.: #6123]	Country	USA
[Ref.: #6123]	Country ISO 3 Code	USA
[Ref.: #6123]	Continent	North America

[Ref.: #49410]	Sample type/isolated from	Human vagina
[Ref.: #49410]	Geographic location (country and/or sea, region)	Seattle
[Ref.: #49410]	Country	USA
[Ref.: #49410]	Country ISO 3 Code	USA
[Ref.: #49410]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Human vagina

[Ref.: #118258]	Sample type/isolated from	Human, Vagina
[Ref.: #118258]	Geographic location (country and/or sea, region)	Seattle, Washington
[Ref.: #118258]	Country	United States of America
[Ref.: #118258]	Country ISO 3 Code	USA
[Ref.: #118258]	Continent	North America
[Ref.: #118258]	Isolation date	1991
* marker position based on {}

Isolation sources categories

#Host Body-Site	#Urogenital tract	#Vagina
#Host	#Human	#Female

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC589208 (>99% sequence identity) for Aerococcus christensenii subclade from Microbeatlas

Aquatic Samples	1099
Soil Samples	773
Animal Samples	30254
Plant Samples	163
Total Samples	32289

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6123]	Pathogenicity (human)	yes, in single cases
[Ref.: #6123]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #118258]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Aerococcus christensenii JCM 18985 gene for 16S rRNA, partial sequence	LC589208	1485	GenBank ENA	87541 tax ID
[Ref.: #6123]	Aerococcus christensenii 16S ribosomal RNA	Y17005	1451	GenBank ENA	87541 tax ID
[Ref.: #20218]	Aerococcus christensenii strain CCUG 28831 16S-23S ribosomal RNA intergenic spacer, partial sequence	JN977130	212	GenBank ENA	87541 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Aerococcus christensenii DSM 15819 = CCUG 28831	GCA_001466745	contig	GenBank ENA	525247 tax ID
[Ref.: #66792]	Aerococcus christensenii CCUG28831	GCA_001543105	complete	GenBank ENA	87541 tax ID	*
[Ref.: #66792]	Aerococcus christensenii DSM 15819 = CCUG 28831	525247.5	wgs	PATRIC	525247 tax ID	*
[Ref.: #66792]	Aerococcus christensenii strain CCUG28831	87541.3	complete	PATRIC	87541 tax ID	*
[Ref.: #66792]	Aerococcus christensenii DSM 15819	2728369595	draft	JGI IMG/M	525247 tax ID	*
[Ref.: #66792]	Aerococcus christensenii CCUG28831	2687453475	complete	JGI IMG/M	87541 tax ID	*

[Ref.: #6123]	GC-content	38.5 mol%
[Ref.: #6123]	GC-content	39.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	38.5 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aerococcus christensenii CCUG28831 NCBI: GCA_001543105.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	99	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aerococcus christensenii CCUG28831 NCBI: GCA_001543105.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.222	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	66.568	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	96.771	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	85.996	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.528	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	93.979	yes

Availability in culture collections External links

[Ref.: #6123]

Culture collection no.

DSM 15819, CCM 4911, CCUG 28831, CIP 106115, JCM 18985, ATCC 48849, LMG 19525

[Ref.: #69909]

SI-ID 13113

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete Genome Sequences of Aerococcus christensenii CCUG 28831T, Aerococcus sanguinicola CCUG 43001T, Aerococcus urinae CCUG 36881T, Aerococcus urinaeequi CCUG 28094T, Aerococcus urinaehominis CCUG 42038 BT, and Aerococcus viridans CCUG 4311T.	Carkaci D, Dargis R, Nielsen XC, Skovgaard O, Fuursted K, Christensen JJ	Genome Announc	10.1128/genomeA.00302-16	2016	*
Phylogeny	Aerococcus christensenii sp. nov., from the human vagina.	Collins MD, Jovita MR, Hutson RA, Ohlen M, Falsen E	Int J Syst Bacteriol	10.1099/00207713-49-3-1125	1999	*

References

#6123

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15819

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22979

Matthew D. Collins,Mar Rodriguez Jovita,Roger A. Hutson,Maria Ohlén,Enevold Falsen: Aerococcus christensenii sp. nov., from the human vagina. IJSEM 49: 1125 - 1128 1999 ( DOI 10.1099/00207713-49-3-1125 , PubMed 10425770 )

#36412 ; Curators of the CIP;
#49410 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 28831

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68375

Automatically annotated from API ID32STA .

#68381

Automatically annotated from API rID32STR .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#69909

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID13113.1 )

#118258 Collection of Institut Pasteur ; Curators of the CIP; CIP 106115
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Aerococcus christensenii in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Aerococcus christensenii CCUG28831

Aerococcus christensenii CCUG28831

Change proposal

Change proposal