Carnobacterium gallinarum (DSM 4847, ATCC 49517, NCFB 2766)

Name: Carnobacterium gallinarum (DSM 4847, ATCC 49517, NCFB 2766)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2255

Type strain

Strain Designation MT44, MT 44

Culture col. no. DSM 4847 ATCC 49517 NCFB 2766 CCUG 30095 CCM 4114 9 more

NCBI tax ID(s) 1449338 2749

Special Collections DSMZ CCUG JCM CIP

History <- NCFB <- M.J. Thornley, MT44 1988, NCFB: strain MT 44 CIP 103160 <-- NCFB 2766 <-- M. J. Thornley MT44. CIP <- 1988, NCFB: strain MT 44

Links

Carnobacterium gallinarum MT44 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from ice slush from around chicken carcasses.

Gram-positive rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 1686

LMG 9841,ATCC 49517,CCM 4114,CCUG 30095,CIP 103160,DSM 4847,NCFB 2766,NCIMB 12848,NCCB 91132,LMD 91.132,CECT 5958,NRRL B-14832,JCM 12517

@ref 20215

Last LPSN update 2026-02-09 11:18:15

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Carnobacteriaceae

Genus Carnobacterium

Species Carnobacterium gallinarum

Full scientific name Carnobacterium gallinarum Collins et al. 1987

BacDive ID	Other strains from **Carnobacterium gallinarum** (1)	Type strain
137103	C. gallinarum 667-85, CIP 101839

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
119513	positive	rod-shaped
125438	positive			92.006

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
1848	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
35493	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
119513	CIP Medium 3	Medium recipe at CIP
119513	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
1848	positive	growth	30	mesophilic
35493	positive	growth	22	psychrophilic
49898	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
49898	aerobe
119513	facultative anaerobe

Murein

@ref	Murein short key	Type
1848	A31	A1gamma m-Dpm-direct

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	+	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
119513	17632 ChEBI	nitrate	-	reduction
119513	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
119513	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119513	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
119513	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
119513	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119513	-	-	+	+	-	+	-	-	-	+	-	-	-	-	-	-	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
119513	not determinedn.d.	-	-	-	-	+	+/-	-	-	-	+	+	+	+	-	-	-	-	+	-	-	+/-	+	+	+	+	+	+	+	+	-	+	+	-	+	-	+	-	-	+	+/-	-	+	-	-	-	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Ice
#Host	#Birds	#Chicken

Isolation

@ref	Sample type
1848	ice slush from around chicken carcasses
49898	Ice slush from around chicken carcasse
67770	Ice slush around chicken carcasses
119513	Animal, Ice slush around chicken carcasses

Taxonmaps

69479

Global distribution of 16S sequence LC153546 (>99% sequence identity) for Carnobacterium from Microbeatlas

Aquatic Samples	362
Soil Samples	110
Animal Samples	895
Plant Samples	108
Total Samples	1475

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
1848	1	Risk group (German classification) According to TRBA 466
119513	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM74437v1 assembly for Carnobacterium gallinarum DSM 4847 MT44	contig	GCA_000744375	1449338.3	2576861831	1449338	74.17

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Carnobacterium gallinarum strain ATCC 49517 16S ribosomal RNA gene, partial sequence	JF749287	809	2749
20218	Carnobacterium gallinarum 16S rRNA gene, strain DSM 4847(T)	AJ387905	1546	2749
20218	Carnobacterium gallinarum partial 16S ribosomal RNA	X54269	1492	2749
67770	Carnobacterium gallinarum gene for 16S ribosomal RNA, partial sequence, strain: JCM 12517	LC153546	1488	2749

GC content

@ref	GC-content (mol%)	Method
1848	34.3
67770	34.3	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Carnobacterium gallinarum DSM 4847 MT44
NCBI: GCA_000744375

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	72.00	no
125439	motility	BacteriaNetⓘ	yes	58.30	no
125439	gram_stain	BacteriaNetⓘ	positive	76.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	82.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Carnobacterium gallinarum DSM 4847 strain MT44
PATRIC: 1449338.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.01	no
125438	anaerobic	anaerobicⓘ	no	88.24	no
125438	spore-forming	spore-formingⓘ	no	64.40	no
125438	aerobic	aerobicⓘ	no	90.79	no
125438	thermophilic	thermophileⓘ	no	96.47	yes
125438	flagellated	motile2+ⓘ	no	84.64	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Bacterial Isolates Associated with Mortality Events in Brown Trout (Salmo trutta) Restocking Farms in Spain: A Descriptive Field Study.	Vargas-Gonzalez A, Barajas M, Perez-Sanchez T.	Animals (Basel)	10.3390/ani15172532	2025
	Heme and menaquinone induced electron transport in lactic acid bacteria.	Brooijmans R, Smit B, Santos F, van Riel J, de Vos WM, Hugenholtz J.	Microb Cell Fact	10.1186/1475-2859-8-28	2009
Enzymology	Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients.	Heuer H, Krsek M, Baker P, Smalla K, Wellington EM.	Appl Environ Microbiol	10.1128/aem.63.8.3233-3241.1997	1997
Enzymology	Detection of low levels of Listeria monocytogenes cells by using a fiber-optic immunosensor.	Geng T, Morgan MT, Bhunia AK.	Appl Environ Microbiol	10.1128/aem.70.10.6138-6146.2004	2004
	Evanescent wave fiber optic biosensor for salmonella detection in food.	Valadez AM, Lana CA, Tu SI, Morgan MT, Bhunia AK.	Sensors (Basel)	10.3390/s90705810	2009
Enzymology	Differentiation of closely related Carnobacterium food isolates based on 16S-23S ribosomal DNA intergenic spacer region polymorphism.	Kabadjova P, Dousset X, Le Cam V, Prevost H.	Appl Environ Microbiol	10.1128/aem.68.11.5358-5366.2002	2002
	Identification of Potential Citrate Metabolism Pathways in Carnobacterium maltaromaticum.	Li H, Ramia NE, Borges F, Revol-Junelles AM, Vogensen FK, Leisner JJ.	Microorganisms	10.3390/microorganisms9102169	2021
	Activities and Prevalence of Proteobacteria Members Colonizing Echinacea purpurea Fully Account for Macrophage Activation Exhibited by Extracts of This Botanical.	Haron MH, Tyler HL, Pugh ND, Moraes RM, Maddox VL, Jackson CR, Pasco DS.	Planta Med	10.1055/s-0042-108590	2016

References

#1848	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 4847
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#35493	; Curators of the CIP;
#49898	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30095
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119513	Collection of Institut Pasteur ; Curators of the CIP; CIP 103160
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Carnobacterium gallinarum (DSM 4847, ATCC 49517, NCFB 2766)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Murein

Metabolite utilization

Metabolite production

Enzymes

API zym

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000744375

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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