Cardiobacterium valvarum (DSM 17211, ATCC BAA-694, CCUG 48245)

Name: Cardiobacterium valvarum (DSM 17211, ATCC BAA-694, CCUG 48245)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2234

Type strain

Culture col. no. DSM 17211 ATCC BAA-694 CCUG 48245 CIP 108480 MDA 3079 1 more

NCBI tax ID(s) 194702

Special Collections DSMZ CCUG CIP

History DSMZ <- CCUG; CCUG 48245 <- X. Y. Han, Univ. Texas; MDA 3079 CIP <- 2004, CCUG <- 2003, X. Han, M.D. Anderson Cancer Center, Houston, Texas, USA: strain MDA 3079

Links

Cardiobacterium valvarum DSM 17211 is a microaerophile, Gram-negative, rod-shaped bacterium that was isolated from Human blood, patient with vegetation on aortic valve.

Gram-negative rod-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 134280

CCUG 48245,NCTC 13294,ATCC BAA-694,CIP 108480,DSM 17211

@ref 20215

Last LPSN update 2026-05-29 08:25:25

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Cardiobacteriales

Family Cardiobacteriaceae

Genus Cardiobacterium

Species Cardiobacterium valvarum

Full scientific name Cardiobacterium valvarum Han et al. 2004

BacDive ID	Other strains from **Cardiobacterium valvarum** (6)	Type strain
142560	C. valvarum CCUG 12990
142571	C. valvarum CCUG 13094
142585	C. valvarum CCUG 13150
146461	C. valvarum CCUG 31208
154313	C. valvarum CCUG 53031
156937	C. valvarum CCUG 67169

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
123791	negative	rod-shaped
125438	negative		98.5
125439			97.782
125439	positive		94.746

Colony morphology

@ref	Incubation period	Hemolysis ability
58050	2-3 days
123791		1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6817	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
6817	FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203)	Medium recipe at MediaDive	Name: FASTIDIOUS ANAEROBE AGAR (DSMZ Medium 1203) Composition: Horse blood 100.0 g/l Fastidious Anaerobe Agar 45.7 g/l Deionized water
40022	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
123791	CIP Medium 6	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6817	positive	growth	37
40022	positive	growth	37
58050	positive	growth	37
123791	positive	growth	25-37
123791	negative	growth	10
123791	negative	growth	41
123791	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
6817	microaerophile
58050	microaerophile
125439	facultative anaerobe	95.089

Spore formation

@ref	Spore formation	Confidence
125438		92.913
125439		96.559

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123791	NaCl		growth	6.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68373	30089 ChEBI	acetate	-	assimilation	from API CAM
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68373	16947 ChEBI	citrate	-	assimilation	from API CAM
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68377	15824 ChEBI	D-fructose	+	builds acid from	from API NH
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68373	17634 ChEBI	D-glucose	-	assimilation	from API CAM
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
123791	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68373	606565 ChEBI	hippurate	-	hydrolysis	from API CAM
123791	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68373	25115 ChEBI	malate	-	assimilation	from API CAM
68377	17306 ChEBI	maltose	+	builds acid from	from API NH
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68373	17632 ChEBI	nitrate	-	reduction	from API CAM
123791	17632 ChEBI	nitrate	-	reduction
123791	16301 ChEBI	nitrite	+	reduction
68377	18257 ChEBI	ornithine	-	degradation	from API NH
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68373	17272 ChEBI	propionate	-	assimilation	from API CAM
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68373	16199 ChEBI	urea	-	hydrolysis	from API CAM
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.
68373	474053	cefazolin	224 µg	from API CAM
68373	48923	erythromycin	14 µg	from API CAM
68373	100147	nalidixic acid	84 µg	from API CAM

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68373	16136 ChEBI	hydrogen sulfide		from API CAM

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123791	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68373	alkaline phosphatase	+	3.1.3.1	from API CAM
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
123791	beta-galactosidase	-	3.2.1.23
68377	beta-galactosidase	-	3.2.1.23	from API NH
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123791	catalase	-	1.11.1.6
68373	catalase	-	1.11.1.6	from API CAM
68382	cystine arylamidase	-	3.4.11.3	from API zym
68373	esterase	+		from API CAM
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123791	gamma-glutamyltransferase	-	2.3.2.2
68373	gamma-glutamyltransferase	-	2.3.2.2	from API CAM
68373	L-arginine arylamidase	+		from API CAM
68373	L-aspartate arylamidase	+	3.4.11.21	from API CAM
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
123791	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123791	ornithine decarboxylase	-	4.1.1.17
68377	ornithine decarboxylase	-	4.1.1.17	from API NH
123791	oxidase	+
68373	pyrrolidonyl arylamidase	+	3.4.19.3	from API CAM
68382	trypsin	+	3.4.21.4	from API zym
68373	urease	-	3.5.1.5	from API CAM
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	gluconeogenesis	100	8 of 8
66794	L-lactaldehyde degradation	100	3 of 3
66794	palmitate biosynthesis	100	22 of 22
66794	coenzyme A metabolism	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	denitrification	100	2 of 2
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	lipoate biosynthesis	100	5 of 5
66794	suberin monomers biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	lipid A biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	photosynthesis	85.71	12 of 14
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	vitamin B1 metabolism	84.62	11 of 13
66794	pentose phosphate pathway	81.82	9 of 11
66794	peptidoglycan biosynthesis	80	12 of 15
66794	threonine metabolism	80	8 of 10
66794	glycogen metabolism	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	serine metabolism	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	phenylalanine metabolism	76.92	10 of 13
66794	acetate fermentation	75	3 of 4
66794	lactate fermentation	75	3 of 4
66794	degradation of sugar alcohols	75	12 of 16
66794	isoleucine metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	tetrahydrofolate metabolism	71.43	10 of 14
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	citric acid cycle	71.43	10 of 14
66794	Entner Doudoroff pathway	70	7 of 10
66794	urea cycle	69.23	9 of 13
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	cyanate degradation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	polyamine pathway	65.22	15 of 23
66794	lipid metabolism	64.52	20 of 31
66794	proline metabolism	63.64	7 of 11
66794	vitamin B6 metabolism	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	ketogluconate metabolism	62.5	5 of 8
66794	alanine metabolism	62.07	18 of 29
66794	purine metabolism	61.7	58 of 94
66794	glycolysis	58.82	10 of 17
66794	methionine metabolism	57.69	15 of 26
66794	propanol degradation	57.14	4 of 7
66794	glutathione metabolism	57.14	8 of 14
66794	cysteine metabolism	55.56	10 of 18
66794	d-mannose degradation	55.56	5 of 9
66794	non-pathway related	55.26	21 of 38
66794	leucine metabolism	53.85	7 of 13
66794	oxidative phosphorylation	50.55	46 of 91
66794	ethanol fermentation	50	1 of 2
66794	heme metabolism	50	7 of 14
66794	adipate degradation	50	1 of 2
66794	glutamate and glutamine metabolism	50	14 of 28
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	butanoate fermentation	50	2 of 4
66794	sulfopterin metabolism	50	2 of 4
66794	pyrimidine metabolism	48.89	22 of 45
66794	lysine metabolism	47.62	20 of 42
66794	tryptophan metabolism	47.37	18 of 38
66794	CO2 fixation in Crenarchaeota	44.44	4 of 9
66794	allantoin degradation	44.44	4 of 9
66794	degradation of sugar acids	44	11 of 25
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	mevalonate metabolism	42.86	3 of 7
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	factor 420 biosynthesis	40	2 of 5
66794	methylglyoxal degradation	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	starch degradation	40	4 of 10
66794	D-cycloserine biosynthesis	40	2 of 5
66794	propionate fermentation	40	4 of 10
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	degradation of hexoses	38.89	7 of 18
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	metabolism of disaccharids	36.36	4 of 11
66794	d-xylose degradation	36.36	4 of 11
66794	tyrosine metabolism	35.71	5 of 14
66794	degradation of pentoses	35.71	10 of 28
66794	isoprenoid biosynthesis	34.62	9 of 26
66794	IAA biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	sphingosine metabolism	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	myo-inositol biosynthesis	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	arginine metabolism	29.17	7 of 24
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	ascorbate metabolism	27.27	6 of 22
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	carnitine metabolism	25	2 of 8
66794	alginate biosynthesis	25	1 of 4
66794	biotin biosynthesis	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	histidine metabolism	24.14	7 of 29
66794	sulfate reduction	23.08	3 of 13
66794	phosphatidylethanolamine bioynthesis	23.08	3 of 13
66794	nitrate assimilation	22.22	2 of 9
66794	arachidonic acid metabolism	22.22	4 of 18

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123791	-	+	+	+	-	+	-	-	+	-	+	+	-	-	-	+	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
123791	not determinedn.d.	-	-	-	-	+/-	-	-	-	-	-	+/-	+/-	+/-	-	-	-	-	+/-	+/-	-	-	-	-	-	-	-	-	+/-	-	-	+/-	+/-	-	-	-	+/-	-	-	-	-	-	+/-	-	-	-	-	-	-	+/-

API CAM

@ref	URE	Reduction of nitrateNIT	EsteraseEST	HIP	GGT	TTC	PYRA	L-arginine arylamidaseArgA	L-aspartic acid arylamidaseAspA	PAL	H2S productionH2S	GLU	SUT	NAL	CFZ	ACE	PROP	MLT	CIT	Erythromycin resistance (+) sensitivity (-)ERO	CAT
6817	-	-	+	-	-	-	+	+	+	+	-	-	+	-	-	-	-	-	-	-	-
6817	-	-	+	-	-	+	+	+	+	+	-	-	-	-	-	-	-	-	-	-	-

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
6817	-	+	+	+	+	-	-	-	+	-	+	+	+
6817	+	+	+	+	-	-	+/-	+	-	-	-	+	-
6817	-	+	+	+	+	-	-	+/-	+	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Patient	-
#Host	#Human	-
#Host Body-Site	#Organ	#Heart
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Sampling date	Isolation date
6817	Human blood, patient with vegetation on aortic valve	Homo sapiens	Houston	USA	USA	North America	29.7499	-95.3584 29.7499/-95.3584
58050	Human blood,endocarditis,ruptures cerebr. aneurysm	Homo sapiens	Texas,Houston	USA	USA	North America			2001-11-15
123791	Human, Blood	Homo sapiens	Houston, Texas	United States of America	USA	North America				2001

Taxonmaps

69479

Global distribution of 16S sequence AF506987 (>99% sequence identity) for Cardiobacterium from Microbeatlas

Aquatic Samples	546
Soil Samples	418
Animal Samples	27464
Plant Samples	129
Total Samples	28557

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6817	2	Risk group (German classification) According to TRBA 466
123791	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	51726_F01 assembly for Cardiobacterium valvarum NCTC13294	contig	GCA_900460955	194702.3	2808606637	194702	69.26
124043	ASM4243151v1 assembly for Cardiobacterium valvarum ATCC BAA-694	contig	GCA_042431515			194702	68.26

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6817	Cardiobacterium valvarum 16S ribosomal RNA gene, partial sequence	AF506987	1493		194702

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 51726_F01 assembly for Cardiobacterium valvarum NCTC13294
NCBI: GCA_900460955

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	95.09	no
125439	gram_stain	BacteriaNetⓘ	positive	94.75	no
125439	motility	BacteriaNetⓘ	no	97.78	no
125439	spore_formation	BacteriaNetⓘ	no	96.56	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Cardiobacterium valvarum strain NCTC13294
PATRIC: 194702.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	90.94	yes
125438	spore-forming	spore-formingⓘ	no	92.91	no
125438	aerobic	aerobicⓘ	no	71.23	yes
125438	thermophilic	thermophileⓘ	no	97.27	yes
125438	flagellated	motile2+ⓘ	no	78.29	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Endocarditis with ruptured cerebral aneurysm caused by Cardiobacterium valvarum sp. nov.	Han XY, Meltzer MC, Woods JT, Fainstein V.	J Clin Microbiol	10.1128/jcm.42.4.1590-1595.2004	2004

References

#6817	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17211
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#40022	; Curators of the CIP;
#58050	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 48245
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68371	Automatically annotated from API 50CH acid .
#68373	Automatically annotated from API CAM .
#68377	Automatically annotated from API NH .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123791	Collection of Institut Pasteur ; Curators of the CIP; CIP 108480
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Cardiobacterium valvarum (DSM 17211, ATCC BAA-694, CCUG 48245)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Pathway annotation

API zym

API 50CHac

API CAM

API NH

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900460955

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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