Name: Trueperella abortisuis Murakami
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 218

Type strain:

Species: Trueperella abortisuis

Strain Designation: Murakami

Culture col. no.: DSM 19515, ATCC BAA-1522, JCM 14813, CCUG 58417, CIP 110059, KCTC 15151

Strain history: CIP <- 2009, S. Murakami, Tokyo Univ. Agriculture, Dept. animal Sci., Atsugi, Japan <- R. Azuma, Higashi-tokura, Kokubunnji, Tokyo, Japan: strain Murakami

NCBI tax ID(s): 445930 (species)

SI-ID 362773

ATCC BAA-1522, DSM 19515, JCM 14813, CIP 110059, CCUG 58417

Other strains from Trueperella abortisuis

T. abortisuis DSM 24630, IMMIB L-1653

Section

Trueperella abortisuis Murakami is an anaerobe, mesophilic, coccus-shaped animal pathogen that forms circular colonies and was isolated from placenta of sow after abortion.

coccus-shaped
colony-forming
anaerobe
animal pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Actinomycetales*
	Family	*Actinomycetaceae*
	Genus	*Trueperella*
	Species	**Trueperella abortisuis**
	Full Scientific Name (LPSN)	Trueperella abortisuis (Azuma et al. 2009) Yassin et al. 2011

Synonym

Arcanobacterium abortisuis

Information on morphological and physiological properties Morphology

[Ref.: #29032]	Gram stain	positive
[Ref.: #115977]	Gram stain	positive

[Ref.: #29032]	Cell shape	rod-shaped
[Ref.: #115977]	Cell shape	rod-shaped
[Ref.: #22976]	Cell shape	coccus-shaped

[Ref.: #115977]	Motility	no
[Ref.: #22976]	Motility	no

[Ref.: #22976]	Cell length	0.3-2.5 µm

[Ref.: #22976]	Cell width	0.2-0.9 µm

[Ref.: #22976]	Type of hemolysis	beta
[Ref.: #22976]	Hemolysis ability	1
[Ref.: #22976]	Colony size	0.5-1.5 mm
[Ref.: #22976]	Colony color	translucent
[Ref.: #22976]	Colony shape	circular
[Ref.: #22976]	Incubation period	2-3 days

[Ref.: #61684]	Incubation period	2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8143]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #8143]

Culture medium growth

[Ref.: #8143]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8143]

Culture medium composition

expand / minimize

[Ref.: #33644]

Culture medium

MEDIUM 20 - for Anaerobic bacteria

[Ref.: #33644]

Culture medium growth

[Ref.: #33644]

Culture medium composition

expand / minimize

[Ref.: #115977]

Culture medium

CIP Medium 20

[Ref.: #115977]

Culture medium growth

[Ref.: #115977]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8143]	growth	37 °C
[Ref.: #33644]	growth	37 °C
[Ref.: #61684]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #8143]	Temperature range	mesophilic
[Ref.: #33644]	Temperature range	mesophilic
[Ref.: #61684]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8143]	Oxygen tolerance	anaerobe
[Ref.: #29032]	Oxygen tolerance	anaerobe
[Ref.: #61684]	Oxygen tolerance	microaerophile
[Ref.: #115977]	Oxygen tolerance	anaerobe

[Ref.: #22976]

Ability of spore formation

[Ref.: #22976]	Murein short key	A11.51
[Ref.: #22976]	Murein types	A5alpha L-Lys-L-Lys-D-Glu

[Ref.: #67770]

Observation

quinones: MK-10(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #22976]	cellobiose ChEBI	+	builds acid from
[Ref.: #29032]	cellobiose ChEBI	+	carbon source
[Ref.: #22976]	D-glucose ChEBI	+	builds acid from
[Ref.: #22976]	D-mannitol ChEBI	+	builds acid from
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #22976]	D-ribose ChEBI	+	builds acid from
[Ref.: #22976]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #22976]	D-xylose ChEBI	-	builds acid from
[Ref.: #29032]	fructose ChEBI	+	carbon source
[Ref.: #29032]	galactose ChEBI	+	carbon source
[Ref.: #22976]	gelatin ChEBI	-	hydrolysis
[Ref.: #29032]	glucose ChEBI	+	carbon source
[Ref.: #22976]	glycerol ChEBI	+	builds acid from
[Ref.: #29032]	glycerol ChEBI	+	carbon source
[Ref.: #22976]	glycogen ChEBI	+	builds acid from
[Ref.: #22976]	hippurate ChEBI	+	hydrolysis
[Ref.: #22976]	L-arabinose ChEBI	-	builds acid from
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #22976]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #22976]	lactose ChEBI	+	builds acid from
[Ref.: #29032]	lactose ChEBI	+	carbon source
[Ref.: #22976]	maltose ChEBI	+	builds acid from
[Ref.: #29032]	maltose ChEBI	+	carbon source
[Ref.: #22976]	mannose ChEBI	-	builds acid from
[Ref.: #29032]	nitrate ChEBI	+	reduction
[Ref.: #115977]	nitrate ChEBI	+	reduction
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #115977]	nitrite ChEBI	-	reduction
[Ref.: #22976]	raffinose ChEBI	-	builds acid from
[Ref.: #29032]	raffinose ChEBI	+	carbon source
[Ref.: #29032]	ribitol ChEBI	+	carbon source
[Ref.: #22976]	salicin ChEBI	-	builds acid from
[Ref.: #22976]	sucrose ChEBI	-	builds acid from
[Ref.: #29032]	sucrose ChEBI	+	carbon source
[Ref.: #22976]	trehalose ChEBI	-	builds acid from
[Ref.: #29032]	trehalose ChEBI	+	carbon source
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #22976]	acetoin ChEBI	yes
[Ref.: #115977]	indole ChEBI	no
[Ref.: #68380]	indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #22976]	acid phosphatase	-	3.1.3.2
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #22976]	alkaline phosphatase	-	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym, API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym, API rID32A
[Ref.: #22976]	alpha-galactosidase	+	3.2.1.22
[Ref.: #29032]	alpha-galactosidase	+	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #22976]	alpha-glucosidase	+	3.2.1.20
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API rID32A
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #22976]	arginine dihydrolase	-	3.5.3.6
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #22976]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #22976]	beta-glucosidase	-	3.2.1.21
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym, API rID32A
[Ref.: #22976]	beta-glucuronidase	+	3.2.1.31
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym, API rID32A
[Ref.: #22976]	catalase	+	1.11.1.6
[Ref.: #115977]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #22976]	esterase lipase (C 8)	-
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #22976]	leucine arylamidase	+	3.4.11.1
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #22976]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym, API rID32A
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #22976]	nitrate reductase	-	1.7.99.4
[Ref.: #115977]	oxidase	-
[Ref.: #68380]	proline-arylamidase	+	3.4.11.5	* from API rID32A
[Ref.: #22976]	pyrazinamidase	-	3.5.1.B15
[Ref.: #22976]	pyrrolidonyl arylamidase	-	3.4.19.3
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #22976]	urease	-	3.5.1.5
[Ref.: #115977]	urease	-	3.5.1.5
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #8143]	12682	-	-	+/-	+	-	+	-	-	+	-	-	+	-	-	-	-	-	+/-	+	-	+/-	+/-	-	-	-	-	-	-	-
[Ref.: #8143]	12681	-	-	-	+	-	+	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #115977]	12333	-	-	-	-	-	+	-	-	-	-	+	+	-	+	+	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8143]	Sample type/isolated from	placenta of sow after abortion
[Ref.: #8143]	Geographic location (country and/or sea, region)	Chiba Prefecture
[Ref.: #8143]	Country	Japan
[Ref.: #8143]	Country ISO 3 Code	JPN
[Ref.: #8143]	Continent	Asia

[Ref.: #61684]	Sample type/isolated from	Porcine placenta,abortion
[Ref.: #61684]	Sampling date	2000
[Ref.: #61684]	Country	Japan
[Ref.: #61684]	Country ISO 3 Code	JPN
[Ref.: #61684]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Sow's placenta after an abortion

[Ref.: #115977]	Sample type/isolated from	Sow, placenta following an abortion
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Suidae (Pig,Swine)
#Host Body-Site	#Urogenital tract	-
#Host Body Product	#Urogenital tract	#Abort

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8143]	Pathogenicity (animal)	yes
[Ref.: #8143]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #115977]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8143]	Arcanobacterium abortisuis gene for 16S rRNA, partial sequence	AB305159	1519	ENA	445930 tax ID
[Ref.: #20218]	Arcanobacterium abortisuis partial 16S rRNA gene, 16S-23S IGS and partial 23S rRNA IGS, strain DSM 19515	FN667627	468	ENA	445930 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Trueperella abortisuis DSM 19515	2923491830	draft	JGI IMG/M	445930 tax ID	*

[Ref.: #8143]	GC-content	63.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29032]	GC-content	63.8 mol%

Availability in culture collections External links

[Ref.: #8143]

Culture collection no.

DSM 19515, ATCC BAA-1522, JCM 14813, CCUG 58417, CIP 110059, KCTC 15151

[Ref.: #69901]

SI-ID 362773

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Development of a loop-mediated isothermal amplification (LAMP) assay for molecular identification of Trueperella abortisuis isolated from pigs.	Ahmed MFE, Alssahen M, Lammler C, Foster G, Kreitlow A, Hennig-Pauka I, Plotz M, Abdulmawjood A	Mol Cell Probes	10.1016/j.mcp.2022.101795	2022	*
Phylogeny	Characterization of Arcanobacterium abortisuis by phenotypic properties and by sequencing the 16S-23S rDNA intergenic spacer region.	Ulbegi-Mohyla H, Hassan AA, Hijazin M, Alber J, Lammler C, Abdulmawjood A, Prenger-Berninghoff E, Weiss R, Zschock M	Vet Microbiol	10.1016/j.vetmic.2010.08.026	2010	*
Phylogeny	Arcanobacterium abortisuis sp. nov., isolated from a placenta of a sow following an abortion.	Azuma R, Murakami S, Ogawa A, Okada Y, Miyazaki S, Makino T	Int J Syst Evol Microbiol	10.1099/ijs.0.004465-0	2009	*

References

#8143

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19515

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22976

A. F. Yassin,H. Hupfer,C. Siering,P. Schumann: Comparative chemotaxonomic and phylogenetic studies on the genus Arcanobacterium Collins et al. 1982 emend. Lehnen et al. 2006: proposal for Trueperella gen. nov. and emended description of the genus Arcanobacterium. IJSEM 61: 1265 - 1274 2011 ( DOI 10.1099/ijs.0.020032-0 , PubMed 20622055 )

#29032

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25462 (see below)

#33644 ; Curators of the CIP;
#61684 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 58417

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

#68382

Automatically annotated from API zym .

#69901

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID362773.1 )

#115977 Collection of Institut Pasteur ; Curators of the CIP; CIP 110059

#25462

IJSEM 1469 2009 ( DOI 10.1099/ijs.0.004465-0 , PubMed 19502337 )

* These data were automatically processed and therefore are not curated

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