Trueperella abortisuis Murakami is an anaerobe, coccus-shaped animal pathogen that forms circular colonies and was isolated from placenta of sow after abortion.
coccus-shaped colony-forming anaerobe animal pathogen genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Actinomycetales |
| Family Actinomycetaceae |
| Genus Trueperella |
| Species Trueperella abortisuis |
| Full scientific name Trueperella abortisuis (Azuma et al. 2009) Yassin et al. 2011 |
| Synonyms (1) |
| BacDive ID | Other strains from Trueperella abortisuis (1) | Type strain |
|---|---|---|
| 23524 | T. abortisuis DSM 24630, IMMIB L-1653 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8143 | PYG MEDIUM (MODIFIED) (DSMZ Medium 104) | Medium recipe at MediaDive | Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water | ||
| 33644 | MEDIUM 20 - for Anaerobic bacteria | Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml) | |||
| 115977 | CIP Medium 20 | Medium recipe at CIP |
| 22976 | Spore formationno |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 22976 | A11.51 | A5alpha L-Lys-L-Lys-D-Glu |
| 67770 | Observationquinones: MK-10(H4) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68380 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32A |
| 22976 | 17057 ChEBI | cellobiose | + | builds acid from | |
| 29032 | 17057 ChEBI | cellobiose | + | carbon source | |
| 22976 | 17634 ChEBI | D-glucose | + | builds acid from | |
| 22976 | 16899 ChEBI | D-mannitol | + | builds acid from | |
| 68380 | 16024 ChEBI | D-mannose | - | fermentation | from API rID32A |
| 22976 | 16988 ChEBI | D-ribose | + | builds acid from | |
| 22976 | 17924 ChEBI | D-sorbitol | - | builds acid from | |
| 22976 | 65327 ChEBI | D-xylose | - | builds acid from | |
| 29032 | 28757 ChEBI | fructose | + | carbon source | |
| 29032 | 28260 ChEBI | galactose | + | carbon source | |
| 22976 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 29032 | 17234 ChEBI | glucose | + | carbon source | |
| 22976 | 17754 ChEBI | glycerol | + | builds acid from | |
| 29032 | 17754 ChEBI | glycerol | + | carbon source | |
| 22976 | 28087 ChEBI | glycogen | + | builds acid from | |
| 22976 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 22976 | 30849 ChEBI | L-arabinose | - | builds acid from | |
| 68380 | 29985 ChEBI | L-glutamate | - | degradation | from API rID32A |
| 22976 | 62345 ChEBI | L-rhamnose | - | builds acid from | |
| 22976 | 17716 ChEBI | lactose | + | builds acid from | |
| 29032 | 17716 ChEBI | lactose | + | carbon source | |
| 22976 | 17306 ChEBI | maltose | + | builds acid from | |
| 29032 | 17306 ChEBI | maltose | + | carbon source | |
| 22976 | 37684 ChEBI | mannose | - | builds acid from | |
| 29032 | 17632 ChEBI | nitrate | + | reduction | |
| 68380 | 17632 ChEBI | nitrate | - | reduction | from API rID32A |
| 115977 | 17632 ChEBI | nitrate | + | reduction | |
| 115977 | 16301 ChEBI | nitrite | - | reduction | |
| 22976 | 16634 ChEBI | raffinose | - | builds acid from | |
| 29032 | 16634 ChEBI | raffinose | + | carbon source | |
| 29032 | 15963 ChEBI | ribitol | + | carbon source | |
| 22976 | 17814 ChEBI | salicin | - | builds acid from | |
| 22976 | 17992 ChEBI | sucrose | - | builds acid from | |
| 29032 | 17992 ChEBI | sucrose | + | carbon source | |
| 22976 | 27082 ChEBI | trehalose | - | builds acid from | |
| 29032 | 27082 ChEBI | trehalose | + | carbon source | |
| 68380 | 27897 ChEBI | tryptophan | - | energy source | from API rID32A |
| 68380 | 16199 ChEBI | urea | - | hydrolysis | from API rID32A |
| @ref | Chebi-ID | Metabolite | Indole test | |
|---|---|---|---|---|
| 68380 | 35581 ChEBI | indole | - | from API rID32A |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 22976 | acid phosphatase | - | 3.1.3.2 | |
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68380 | alanine arylamidase | - | 3.4.11.2 | from API rID32A |
| 22976 | alkaline phosphatase | - | 3.1.3.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68380 | alkaline phosphatase | - | 3.1.3.1 | from API rID32A |
| 68380 | alpha-arabinosidase | - | 3.2.1.55 | from API rID32A |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68380 | alpha-fucosidase | - | 3.2.1.51 | from API rID32A |
| 22976 | alpha-galactosidase | + | 3.2.1.22 | |
| 29032 | alpha-galactosidase | + | 3.2.1.22 | |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 22976 | alpha-glucosidase | + | 3.2.1.20 | |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68380 | alpha-glucosidase | + | 3.2.1.20 | from API rID32A |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 22976 | arginine dihydrolase | - | 3.5.3.6 | |
| 68380 | arginine dihydrolase | - | 3.5.3.6 | from API rID32A |
| 22976 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68380 | beta-galactosidase | + | 3.2.1.23 | from API rID32A |
| 68380 | beta-Galactosidase 6-phosphate | - | from API rID32A | |
| 22976 | beta-glucosidase | - | 3.2.1.21 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68380 | beta-glucosidase | - | 3.2.1.21 | from API rID32A |
| 22976 | beta-glucuronidase | + | 3.2.1.31 | |
| 68382 | beta-glucuronidase | + | 3.2.1.31 | from API zym |
| 68380 | beta-glucuronidase | + | 3.2.1.31 | from API rID32A |
| 22976 | catalase | + | 1.11.1.6 | |
| 115977 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | - | from API zym | |
| 22976 | esterase lipase (C 8) | - | ||
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68380 | glutamate decarboxylase | - | 4.1.1.15 | from API rID32A |
| 68380 | glutamyl-glutamate arylamidase | - | from API rID32A | |
| 68380 | glycin arylamidase | - | from API rID32A | |
| 68380 | histidine arylamidase | - | from API rID32A | |
| 22976 | leucine arylamidase | + | 3.4.11.1 | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68380 | leucyl glycin arylamidase | - | 3.4.11.1 | from API rID32A |
| 68382 | lipase (C 14) | - | from API zym | |
| 22976 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68380 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32A |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 22976 | nitrate reductase | - | 1.7.99.4 | |
| 115977 | oxidase | - | ||
| 68380 | proline-arylamidase | + | 3.4.11.5 | from API rID32A |
| 22976 | pyrazinamidase | - | 3.5.1.B15 | |
| 22976 | pyrrolidonyl arylamidase | - | 3.4.19.3 | |
| 68380 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32A |
| 68380 | serine arylamidase | - | from API rID32A | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68380 | tryptophan deaminase | - | 4.1.99.1 | from API rID32A |
| 68380 | tyrosine arylamidase | - | from API rID32A | |
| 22976 | urease | - | 3.5.1.5 | |
| 115977 | urease | - | 3.5.1.5 | |
| 68380 | urease | - | 3.5.1.5 | from API rID32A |
| 68382 | valine arylamidase | - | from API zym |
| @ref | URE | ADH (Arg) | alpha GAL | beta GAL | beta-Galactosidase 6-phosphatebeta GP | alpha GLU | beta GLU | alpha ARA | beta GUR | beta-N-Acetyl-beta-glucosaminidasebeta NAG | MNE | RAF | GDC | alpha FUC | Reduction of nitrateNIT | IND | PAL | L-arginine arylamidaseArgA | ProA | LGA | Phenylalanine arylamidasePheA | Leucine arylamidaseLeuA | PyrA | Tyrosine arylamidaseTyrA | Alanine arylamidaseAlaA | Glycin arylamidaseGlyA | Histidine arylamidaseHisA | Glutamyl-glutamate arylamidaseGGA | Serine arylamidaseSerA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8143 | - | - | +/- | + | - | + | - | - | + | - | - | + | - | - | - | - | - | +/- | + | - | +/- | +/- | - | - | - | - | - | - | - | |
| 8143 | - | - | - | + | - | + | - | - | + | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM3081109v1 assembly for Trueperella abortisuis DSM 19515 | contig | 445930 | 77.27 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Arcanobacterium abortisuis partial 16S rRNA gene, 16S-23S IGS and partial 23S rRNA IGS, strain DSM 19515 | FN667627 | 468 | 445930 | ||
| 8143 | Arcanobacterium abortisuis gene for 16S rRNA, partial sequence | AB305159 | 1519 | 445930 | ||
| 124043 | Trueperella abortisuis JCM 14813 gene for 16S rRNA, partial sequence. | LC500014 | 1483 | 445930 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Phenotypic and genotypic characteristics of Trueperella abortisuis recovered from the feline reproductive tract. | Ningrum SG, Kreitlow A, Lammler C, Metzner M, Plotz M, Abdulmawjood A. | Infect Genet Evol | 10.1016/j.meegid.2024.105697 | 2024 | |
| Genetics | First isolation and whole-genome sequencing of Trueperella abortisuis from a goat in Canada. | Ghosh K, McGregor G, Hughes G, Trimble M, Hsiao W, Trokhymchuk A. | Can Vet J | 2024 | ||
| Development of a novel Trueperella pyogenes-specific PCR assay. | Ochi K, Okamoto M, Okamoto M, Okura M, Takamatsu D. | J Vet Med Sci | 10.1292/jvms.19-0522 | 2020 | ||
| Phylogeny | Development of a loop-mediated isothermal amplification (LAMP) assay for molecular identification of Trueperella abortisuis isolated from pigs. | Ahmed MFE, Alssahen M, Lammler C, Foster G, Kreitlow A, Hennig-Pauka I, Plotz M, Abdulmawjood A | Mol Cell Probes | 10.1016/j.mcp.2022.101795 | 2022 | |
| Phylogeny | Characterization of Arcanobacterium abortisuis by phenotypic properties and by sequencing the 16S-23S rDNA intergenic spacer region. | Ulbegi-Mohyla H, Hassan AA, Hijazin M, Alber J, Lammler C, Abdulmawjood A, Prenger-Berninghoff E, Weiss R, Zschock M | Vet Microbiol | 10.1016/j.vetmic.2010.08.026 | 2010 | |
| Phylogeny | Arcanobacterium abortisuis sp. nov., isolated from a placenta of a sow following an abortion. | Azuma R, Murakami S, Ogawa A, Okada Y, Miyazaki S, Makino T | Int J Syst Evol Microbiol | 10.1099/ijs.0.004465-0 | 2009 |
| #8143 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19515 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #22976 | A. F. Yassin,H. Hupfer,C. Siering,P. Schumann: Comparative chemotaxonomic and phylogenetic studies on the genus Arcanobacterium Collins et al. 1982 emend. Lehnen et al. 2006: proposal for Trueperella gen. nov. and emended description of the genus Arcanobacterium. IJSEM 61: 1265 - 1274 2011 ( DOI 10.1099/ijs.0.020032-0 , PubMed 20622055 ) |
| #25462 | IJSEM 1469 2009 ( DOI 10.1099/ijs.0.004465-0 , PubMed 19502337 ) |
| #29032 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25462 |
| #33644 | ; Curators of the CIP; |
| #61684 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 58417 |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68380 | Automatically annotated from API rID32A . |
| #68382 | Automatically annotated from API zym . |
| #115977 | Collection of Institut Pasteur ; Curators of the CIP; CIP 110059 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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