Name: Anaerococcus prevotii PC 1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17967

Type strain:

Species: Anaerococcus prevotii

Strain Designation: PC 1, 10107

Culture col. no.: DSM 20548, ATCC 9321, JCM 6508, CCUG 41932, CIP 105881, NCTC 11806

Strain history: CIP <- 1999, J.P. Carlier, Inst. Pasteur, Paris, France: strain 10107 <- DSM <- ATCC <- M. Pittman, strain PC 1, Staphylococcus aerogenes

NCBI tax ID(s): 525919 (strain), 33034 (species)

SI-ID 46461

ATCC 9321, ATCC 14951, DSM 20548, CCUG 4946, CIP 105881, CCUG 41932, KCTC 3319, CCRC 14403, NCTC 11806, CCUG 42000, JCM 6508, BCRC 14403

Special Collections

Other strains from Anaerococcus prevotii

Section

Anaerococcus prevotii PC 1 is an anaerobe, Gram-positive bacterium that was isolated from human plasma.

Gram-positive
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Peptoniphilaceae*
	Genus	*Anaerococcus*
	Species	**Anaerococcus prevotii**
	Full Scientific Name (LPSN)	Anaerococcus prevotii (Foubert and Douglas 1948) Ezaki et al. 2001

	Synonym	"Micrococcus* prevotii"*
	Synonym	Peptococcus prevotii
	Synonym	Peptostreptococcus prevotii

Information on morphological and physiological properties Morphology

[Ref.: #121952]	Gram stain	positive

[Ref.: #121952]	Cell shape	coccus-shaped

[Ref.: #121952]	Motility	no

Multimedia content

[Ref.: #66793]

Caption:

electron microscopic image

[Ref.: #66793]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8776]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #8776]

Culture medium growth

[Ref.: #8776]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8776]

Culture medium composition

expand / minimize

[Ref.: #38589]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #38589]

Culture medium growth

[Ref.: #38589]

Culture medium composition

expand / minimize

[Ref.: #121952]

Culture medium

CIP Medium 20

[Ref.: #121952]

Culture medium growth

[Ref.: #121952]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #121952]

Culture medium

CIP Medium 6

[Ref.: #121952]

Culture medium growth

[Ref.: #121952]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #8776]	growth	37 °C
[Ref.: #38589]	growth	37 °C
[Ref.: #67770]	growth	37 °C
[Ref.: #121952]	growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8776]

Oxygen tolerance

anaerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %96

[Ref.: #8776]	Murein short key	A12.02
[Ref.: #8776]	Murein types	A4alpha' L-Lys-D-Glu

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #121952]	cellobiose ChEBI	-	degradation
[Ref.: #121952]	D-arabinose ChEBI	-	degradation
[Ref.: #121952]	D-fructose ChEBI	-	degradation
[Ref.: #121952]	D-glucose ChEBI	-	degradation
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #121952]	D-xylose ChEBI	-	degradation
[Ref.: #121952]	esculin ChEBI	-	hydrolysis
[Ref.: #121952]	hippurate ChEBI	+	hydrolysis
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #121952]	lactose ChEBI	-	degradation
[Ref.: #121952]	maltose ChEBI	-	degradation
[Ref.: #121952]	nitrate ChEBI	-	reduction
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #121952]	nitrite ChEBI	-	reduction
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #121952]	salicin ChEBI	-	degradation
[Ref.: #121952]	sucrose ChEBI	-	degradation
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	+	hydrolysis	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #121952]		indole ChEBI	no
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #121952]		acetoin ChEBI	-
[Ref.: #68380]		indole ChEBI		-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #121952]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A, API zym
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68380]	alpha-fucosidase	-	3.2.1.51	* from API rID32A, API zym
[Ref.: #68380]	alpha-galactosidase	+	3.2.1.22	* from API rID32A
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68380]	alpha-glucosidase	+	3.2.1.20	* from API rID32A, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #121952]	beta-galactosidase	+	3.2.1.23
[Ref.: #68380]	beta-galactosidase	-	3.2.1.23	* from API rID32A, API zym
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A, API zym
[Ref.: #68380]	beta-glucuronidase	+	3.2.1.31	* from API rID32A, API zym
[Ref.: #121952]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #121952]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #121952]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32A, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #121952]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #121952]	oxidase	-
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API rID32A
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	+		* from API rID32A
[Ref.: #121952]	urease	+	3.5.1.5
[Ref.: #68380]	urease	+	3.5.1.5	* from API rID32A
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #8776]	12718	+	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-	+/-	-	-	-	+/-	+	+	-	-	+/-	-	+/-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121952]	9060	-	-	-	-	-	-	+	-	-	-	-	-	-	-	+	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8776]	Sample type/isolated from	human plasma

[Ref.: #67770]	Sample type/isolated from	Human clinical specimen

[Ref.: #121952]	Sample type/isolated from	Human, Plasma
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Fluids	#Blood

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF542232 (>99% sequence identity) for Anaerococcus prevotii from Microbeatlas

Aquatic Samples	212
Soil Samples	68
Animal Samples	9481
Plant Samples	104
Total Samples	9865

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8776]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #121952]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #8776]	Anaerococcus prevotii gene for 16S ribosomal RNA, partial sequence, isolate: GIFU 7658	D14139	1375	GenBank ENA	525919 tax ID
[Ref.: #67770]	Anaerococcus prevotii gene for 16S ribosomal RNA, partial sequence, strain: JCM 6508	AB971807	1488	GenBank ENA	33034 tax ID
[Ref.: #67770]	Anaerococcus prevotii strain CCUG 41932 16S ribosomal RNA gene, partial sequence	AF542232	1381	GenBank ENA	525919 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Anaerococcus prevotii NCTC11806	GCA_900445285	contig	GenBank ENA	33034 tax ID
[Ref.: #66792]	Anaerococcus prevotii DSM 20548	GCA_000024105	complete	GenBank ENA	525919 tax ID	*
[Ref.: #66792]	Anaerococcus prevotii strain NCTC11806	33034.3	wgs	PATRIC	33034 tax ID	*
[Ref.: #66792]	Anaerococcus prevotii PC 1, DSM 20548	644736326	complete	JGI IMG/M	525919 tax ID	*
[Ref.: #66792]	Anaerococcus prevotii NCTC 11806	2808606805	draft	JGI IMG/M	33034 tax ID	*

[Ref.: #8776]	GC-content	33.0 mol%
[Ref.: #67770]	GC-content	29-33 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Anaerococcus prevotii DSM 20548 DSM 20548 NCBI: GCA_000024105.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	96	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anaerococcus prevotii DSM 20548 DSM 20548 NCBI: GCA_000024105.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	85.223	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	88.367	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	95.922	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	75.829	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.375	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	89.479	no

Availability in culture collections External links

[Ref.: #8776]

Culture collection no.

DSM 20548, ATCC 9321, JCM 6508, CCUG 41932, CIP 105881, NCTC 11806

[Ref.: #86954]

SI-ID 46461

References

#8776

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20548

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#38589 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86954

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46461.1 )

#121952 Collection of Institut Pasteur ; Curators of the CIP; CIP 105881
* These data were automatically processed and therefore are not curated

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Anaerococcus prevotii DSM 20548 DSM 20548

Anaerococcus prevotii DSM 20548 DSM 20548

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