Pseudoleptotrichia goodfellowii (DSM 19756, CCUG 32286, CIP 107915)

Name: Pseudoleptotrichia goodfellowii (DSM 19756, CCUG 32286, CIP 107915)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17864

Type strain

Strain Designation LB 57

Culture col. no. DSM 19756 CCUG 32286 CIP 107915 LB 57 JCM 16774

NCBI tax ID(s) 714315 157692

Special Collections DSMZ CCUG JCM CIP Literature strains

History <- CCUG; LB 57 {2008} <- R. Hammann CCUG 32286 <-- R. Hammann LB 57. CIP <- 2003, CCUG <- D. Heidelberg, Becton Dickinson: strain LB 57

Links

Pseudoleptotrichia goodfellowii LB 57 is an anaerobe, Gram-negative, rod-shaped bacterium that was isolated from prosthetic aortic valve.

Gram-negative rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 55133

CCUG 32286,CIP 107915,DSM 19756,JCM 16774

@ref 20215

Last LPSN update 2026-02-09 11:22:19

Domain Bacteria

Phylum Fusobacteriota

Class Fusobacteriia

Order Fusobacteriales

Family Leptotrichiaceae

Genus Pseudoleptotrichia

Species Pseudoleptotrichia goodfellowii

Full scientific name Pseudoleptotrichia goodfellowii (Eribe et al. 2004) Eisenberg et al. 2020

Synonyms (1)

Leptotrichia goodfellowii

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
30006	negative	3 µm	0.45 µm	rod-shaped
125438					90
119707	negative			rod-shaped

Colony morphology

119707

Hemolysis ability1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
8296	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
8296	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)	Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
34948	MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)
119707	CIP Medium 10	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8296	positive	growth	37
30006	positive	optimum	37
34948	positive	growth	37
50947	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
8296	anaerobe
30006	anaerobe
50947	anaerobe
50947	microaerophile
119707	facultative anaerobe
125439	obligate anaerobe	99.4

Spore formation

30006

Spore formationno

Observation

30006

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30006	29016 ChEBI	arginine	+	carbon source
68380	29016 ChEBI	arginine	+	hydrolysis	from API rID32A
119707	17057 ChEBI	cellobiose	-	degradation
119707	17108 ChEBI	D-arabinose	-	degradation
119707	15824 ChEBI	D-fructose	+	degradation
119707	17634 ChEBI	D-glucose	+	degradation
119707	65327 ChEBI	D-xylose	-	degradation
30006	4853 ChEBI	esculin	+	hydrolysis
119707	4853 ChEBI	esculin	+	hydrolysis
30006	27570 ChEBI	histidine	+	carbon source
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
119707	17716 ChEBI	lactose	-	degradation
30006	25017 ChEBI	leucine	+	carbon source
119707	17306 ChEBI	maltose	-	degradation
30006	37684 ChEBI	mannose	+	carbon source
30006	506227 ChEBI	N-acetylglucosamine	+	carbon source
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
119707	17632 ChEBI	nitrate	+	reduction
119707	17632 ChEBI	nitrate	+	respiration
119707	16301 ChEBI	nitrite	+	reduction
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
119707	17814 ChEBI	salicin	-	degradation
119707	17992 ChEBI	sucrose	-	degradation
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A
119707	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
30006	alkaline phosphatase	+	3.1.3.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68382	alpha-mannosidase	+	3.2.1.24	from API zym
119707	amylase	-
68380	arginine dihydrolase	+	3.5.3.6	from API rID32A
68382	beta-galactosidase	+	3.2.1.23	from API zym
119707	beta-galactosidase	+	3.2.1.23
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	+	3.2.1.21	from API rID32A
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
119707	caseinase	+	3.4.21.50
30006	catalase	+	1.11.1.6
119707	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
119707	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119707	gelatinase	+/-
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
119707	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
119707	lipase	-
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119707	oxidase	-
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
119707	protease	-
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
119707	tween esterase	-
68380	tyrosine arylamidase	-		from API rID32A
119707	urease	-	3.5.1.5
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119707	-	+	+	+	-	+	-	-	-	-	+	+	-	+	+	+	-	+	+	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
8296	-	+	-	+	-	-	+	-	-	+	+/-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Medical device	#Heart valve

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
8296	prosthetic aortic valve		Germany	DEU	Europe
50947	Human blood,endocarditis,prosthetic aortic valve	Heidelberg	Germany	DEU	Europe
67770	Human blood	Heidelberg	Germany	DEU	Europe
119707	Human, Blood	Heidelberg	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence AB558169 (>99% sequence identity) for Pseudoleptotrichia goodfellowii subclade from Microbeatlas

Aquatic Samples	971
Soil Samples	124
Animal Samples	11021
Plant Samples	43
Total Samples	12159

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
8296	yes, in single cases	1	Risk group (German classification) According to TRBA 466
119707		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM799050v1 assembly for Pseudoleptotrichia goodfellowii JCM16774	complete	GCA_007990505	157692.5	8062690467	157692	97.74
67770	ASM51653v1 assembly for Pseudoleptotrichia goodfellowii DSM 19756	scaffold	GCA_000516535	714315.3	2506520045	714315	76.2

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
8296	Leptotrichia goodfellowii strain LB57 16S ribosomal RNA gene, partial sequence	AY029807	1485	714315
67770	Leptotrichia goodfellowii gene for 16S ribosomal RNA, partial sequence, strain: JCM 16774	AB558169	1473	157692
124043	Pseudoleptotrichia goodfellowii JCM 16774 gene for 16S rRNA, partial sequence.	LC752379	571	157692

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Leptotrichia goodfellowii strain JCM16774
PATRIC: 157692.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	55.30	no
125439	motility	BacteriaNetⓘ	yes	67.70	no
125439	gram_stain	BacteriaNetⓘ	positive	84.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	99.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudoleptotrichia goodfellowii JCM16774
NCBI: GCA_007990505.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	84.97	yes
125438	anaerobic	anaerobicⓘ	yes	57.07	no
125438	aerobic	aerobicⓘ	no	95.79	yes
125438	spore-forming	spore-formingⓘ	no	88.44	yes
125438	thermophilic	thermophileⓘ	no	92.26	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Enhanced propagation of Granulicatella adiacens from human oral microbiota by hyaluronan.	Yabuuchi S, Oiki S, Minami S, Takase R, Watanabe D, Hashimoto W.	Sci Rep	10.1038/s41598-022-14857-9	2022
Phylogeny	Proposal to reclassify Leptotrichia goodfellowii into a novel genus as Pseudoleptotrichia goodfellowii gen. nov., comb. nov.	Eisenberg T, Glaeser SP, Blom J, Kampfer P	Int J Syst Evol Microbiol	10.1099/ijsem.0.004024	2020
	Description of three new Leptotrichia species isolated from dental biofilm: Leptotrichia rugosa sp. nov., Leptotrichia mesophila sp. nov. and Leptotrichia alba sp. nov.	Wang X, Jiao SY, Wang J, Wu RR, Zhang TT, Wang CM, Li XJ.	Anaerobe	10.1016/j.anaerobe.2025.102948	2025
Phylogeny	Genetic diversity of Leptotrichia and description of Leptotrichia goodfellowii sp. nov., Leptotrichia hofstadii sp. nov., Leptotrichia shahii sp. nov. and Leptotrichia wadei sp. nov.	Eribe ERK, Paster BJ, Caugant DA, Dewhirst FE, Stromberg VK, Lacy GH, Olsen I	Int J Syst Evol Microbiol	10.1099/ijs.0.02819-0	2004

References

#8296	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19756
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26370	IJSEM 583 2004 ( DOI 10.1099/ijs.0.02819-0 , PubMed 15023979 )
#30006	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26370
#34948	; Curators of the CIP;
#50947	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 32286
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119707	Collection of Institut Pasteur ; Curators of the CIP; CIP 107915
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudoleptotrichia goodfellowii (DSM 19756, CCUG 32286, CIP 107915)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API rID32A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_007990505

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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