Name: Salinivibrio sharmensis B
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17247

Type strain:

Species: Salinivibrio sharmensis

Strain Designation: B, BAG

Culture col. no.: DSM 18182, ATCC BAA-1319, JCM 19030

Strain history: DSM 18182 <-- I. Romano strain B.

NCBI tax ID(s): 390883 (species)

SI-ID 397771

DSM 18182

Special Collections

DSMZ
JCM

Section

Salinivibrio sharmensis B is a bacterium that was isolated from mixture of sediment and water.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Salinivibrio*
	Species	**Salinivibrio sharmensis**
	Full Scientific Name (LPSN)	Salinivibrio sharmensis Romano et al. 2011

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7414]

Culture medium

SALINIVIBRIO SHARMENSIS MEDIUM (DSMZ Medium 1461)

[Ref.: #7414]

Culture medium growth

[Ref.: #7414]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7414]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7414]			growth	35 °C
[Ref.: #67770]			growth	35 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7414]	Sample type/isolated from	mixture of sediment and water
[Ref.: #7414]	Geographic location (country and/or sea, region)	Ras Mohammed Park, located at Sharm el-Sheikh (27°51'N 34°16'E)
[Ref.: #7414]	Country	Egypt
[Ref.: #7414]	Country ISO 3 Code	EGY
[Ref.: #7414]	Continent	Africa

[Ref.: #67770]	Sample type/isolated from	Saline lake in Ras Mohammed Park
[Ref.: #67770]	Country	Egypt
[Ref.: #67770]	Country ISO 3 Code	EGY
[Ref.: #67770]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7414]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7414]	Salinivibrio sharmensis partial 16S rRNA gene, type strain BAGT	AM279734	1377	GenBank ENA	390883 tax ID
[Ref.: #124043]	Salinivibrio sharmensis partial 16S rRNA gene, strain DSM 18182	LT627804	1008	GenBank ENA	390883 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Salinivibrio sharmensis DSM 18182	GCA_001995985	contig	GenBank ENA	390883 tax ID
[Ref.: #66792]	Salinivibrio sharmensis DSM 18182	2791354969	draft	JGI IMG/M	390883 tax ID	*

[Ref.: #7414]

GC-content

51 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #7414]

Culture collection no.

DSM 18182, ATCC BAA-1319, JCM 19030

[Ref.: #86245]

SI-ID 397771

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Salinivibrio kushneri sp. nov., a moderately halophilic bacterium isolated from salterns.	Lopez-Hermoso C, de la Haba RR, Sanchez-Porro C, Ventosa A	Syst Appl Microbiol	10.1016/j.syapm.2017.12.001	2017	*
Phylogeny	Salinivibrio sharmensis sp. nov., a novel haloalkaliphilic bacterium from a saline lake in Ras Mohammed Park (Egypt).	Romano I, Orlando P, Gambacorta A, Nicolaus B, Dipasquale L, Pascual J, Giordano A, Lama L	Extremophiles	10.1007/s00792-010-0349-9	2011	*

References

#7414

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18182

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#86245

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397771.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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