Name: Pelosinus propionicus TmPN3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17203

Type strain:

Species: Pelosinus propionicus

Strain Designation: TmPN3

Culture col. no.: DSM 13327, ATCC BAA-626, CIP 108813

Strain history: <- H. Boga, Universität Konstanz, Fakultät für Biologie, Konstanz, Germany; TmPN3 <- H. Boga {1997}

NCBI tax ID(s): 1123291 (strain), 380084 (species)

SI-ID 293710

ATCC BAA-626, DSM 13327, CIP 108813

Section

Pelosinus propionicus TmPN3 is an anaerobe, spore-forming, mesophilic bacterium that was isolated from gut of the termite Thoracotermes macrothorax Sjöstedt, P1 section.

motile
spore-forming
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Negativicutes*
	Order	*Selenomonadales*
	Family	*Sporomusaceae*
	Genus	*Pelosinus*
	Species	**Pelosinus propionicus**
	Full Scientific Name (LPSN)	Pelosinus propionicus (Boga et al. 2007) Moe et al. 2012

Synonym

Sporotalea propionica

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.854

[Ref.: #69480]	Motility	yes Confidence in %97.665

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4996]

Culture medium

SPOROMUSA TMAO3 MEDIUM (DSMZ Medium 503a)

[Ref.: #4996]

Culture medium growth

[Ref.: #4996]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4996]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4996]			growth	30 °C

[Ref.: #4996]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #4996]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.999

[Ref.: #69480]

Ability of spore formation

yes Confidence in %99.998

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4996]	Sample type/isolated from	gut of the termite Thoracotermes macrothorax Sjöstedt, P1 section
[Ref.: #4996]	Host species	Thoracotermes macrothorax
[Ref.: #4996]	Geographic location (country and/or sea, region)	Brazzaville, Mayombe Forest
[Ref.: #4996]	Country	Republic of the Congo
[Ref.: #4996]	Country ISO 3 Code	COG
[Ref.: #4996]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Insecta
#Host Body-Site	#Gastrointestinal tract	#Stomach

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4996]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4996]	Sporotalea propionica partial 16S rRNA gene, type strain TmPN3T	AM258975	1580	ENA	1123291 tax ID
[Ref.: #20218]	Sporotalea propionica strain DSM 13327 clone 100 16S ribosomal RNA gene, partial sequence	JF749991	1651	ENA	1123291 tax ID	*
[Ref.: #20218]	Sporotalea propionica strain DSM 13327 clone 106 16S ribosomal RNA gene, partial sequence	JF749992	1651	ENA	1123291 tax ID	*
[Ref.: #20218]	Sporotalea propionica strain DSM 13327 clone 115 16S ribosomal RNA gene, partial sequence	JF749993	1651	ENA	1123291 tax ID	*
[Ref.: #20218]	Sporotalea propionica strain DSM 13327 clone 98 16S ribosomal RNA gene, partial sequence	JF749994	1550	ENA	1123291 tax ID	*
[Ref.: #20218]	Sporotalea propionica strain DSM 13327 clone 103 16S ribosomal RNA gene, partial sequence	JF749995	1550	ENA	1123291 tax ID	*
[Ref.: #20218]	Sporotalea propionica strain DSM 13327 clone 97 16S ribosomal RNA gene, partial sequence	JF749996	1550	ENA	1123291 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pelosinus propionicus DSM 13327	GCA_900114615	scaffold	GenBank	1123291 tax ID	*
[Ref.: #66792]	Pelosinus propionicus DSM 13327	1123291.3	wgs	PATRIC	1123291 tax ID	*
[Ref.: #66792]	Pelosinus propionicus DSM 13327	2636416028	draft	JGI IMG/M	1123291 tax ID	*

[Ref.: #4996]

GC-content

38.6 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pelosinus propionicus DSM 13327 DSM 13327 NCBI: GCA_900114615.1
[Ref.: #69481]	spore-forming	yes	80	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pelosinus propionicus DSM 13327 DSM 13327 NCBI: GCA_900114615.1
[Ref.: #69480]	motile	yes	90.241	no
[Ref.: #69480]	flagellated	yes	62.666	no
[Ref.: #69480]	gram-positive	no	94.54	no
[Ref.: #69480]	anaerobic	yes	97.264	no
[Ref.: #69480]	aerobic	no	96.842	no
[Ref.: #69480]	halophile	no	96.712	no
[Ref.: #69480]	spore-forming	yes	87.849	no
[Ref.: #69480]	glucose-ferment	no	68.191	no
[Ref.: #69480]	thermophile	no	99.492	no
[Ref.: #69480]	glucose-util	yes	85.056	no

Availability in culture collections External links

[Ref.: #4996]

Culture collection no.

DSM 13327, ATCC BAA-626, CIP 108813

[Ref.: #86202]

SI-ID 293710

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pelosinus defluvii sp. nov., isolated from chlorinated solvent-contaminated groundwater, emended description of the genus Pelosinus and transfer of Sporotalea propionica to Pelosinus propionicus comb. nov.	Moe WM, Stebbing RE, Rao JU, Bowman KS, Nobre MF, da Costa MS, Rainey FA	Int J Syst Evol Microbiol	10.1099/ijs.0.033753-0	2011	*
Phylogeny	Sporotalea propionica gen. nov. sp. nov., a hydrogen-oxidizing, oxygen-reducing, propionigenic firmicute from the intestinal tract of a soil-feeding termite.	Boga HI, Ji R, Ludwig W, Brune A	Arch Microbiol	10.1007/s00203-006-0168-7	2006	*

References

#4996

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13327

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#86202

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID293710.1 )

* These data were automatically processed and therefore are not curated

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Pelosinus propionicus DSM 13327 DSM 13327

Pelosinus propionicus DSM 13327 DSM 13327

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