Name: Propionispora hippei KS
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 17150

Type strain:

Species: Propionispora hippei

Strain Designation: KS, KS-SP4I6

Culture col. no.: DSM 15287, ATCC BAA-665

Strain history: <- H. Biebl, GBF; KS-SP4I6 <- D. Abou-Zeid {1998}

NCBI tax ID(s): 1123003 (strain), 209080 (species)

SI-ID 118517

ATCC BAA-665, DSM 15287

Special Collections

Section

Propionispora hippei KS is an anaerobe, spore-forming, Gram-negative bacterium that was isolated from sewage treatment plant.

Gram-negative
rod-shaped
spore-forming
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Negativicutes*
	Order	*Selenomonadales*
	Family	*Sporomusaceae*
	Genus	*Propionispora*
	Species	**Propionispora hippei**
	Full Scientific Name (LPSN)	Propionispora hippei Abou-Zeid et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #30195]	Gram stain	negative

[Ref.: #30195]	Cell shape	rod-shaped

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5828]

Culture medium

THIOGLYCOLATE MEDIUM (MERCK 108190) (DSMZ Medium 153)

[Ref.: #5828]

Culture medium growth

[Ref.: #5828]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5828]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #5828]	growth	37 °C
[Ref.: #30195]	growth	20-50 °C
[Ref.: #30195]	optimum	37 °C

	pH	Kind of pH		pH
[Ref.: #30195]			optimum	6.8
[Ref.: #30195]			growth	5-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5828]	Oxygen tolerance	anaerobe
[Ref.: #30195]	Oxygen tolerance	aerobe

[Ref.: #30195]

Ability of spore formation

yes

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30195]	fructose ChEBI	+	carbon source
[Ref.: #30195]	glucose ChEBI	+	carbon source
[Ref.: #30195]	glycerol ChEBI	+	carbon source
[Ref.: #30195]	mannitol ChEBI	+	carbon source
[Ref.: #30195]	xylitol ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5828]	Sample type/isolated from	sewage treatment plant
[Ref.: #5828]	Geographic location (country and/or sea, region)	Lower Saxony, Gifhorn
[Ref.: #5828]	Country	Germany
[Ref.: #5828]	Country ISO 3 Code	DEU
[Ref.: #5828]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Water treatment plant

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ508927 (>99% sequence identity) for Propionispora hippei subclade from Microbeatlas

Aquatic Samples	536
Soil Samples	124
Animal Samples	115
Plant Samples	28
Total Samples	803

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5828]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5828]	Propionispora hippei partial 16S rRNA gene, clone 5	AJ508927	1547	GenBank ENA	209080 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Propionispora hippei DSM 15287	GCA_900141835	scaffold	GenBank ENA	1123003 tax ID	*
[Ref.: #66792]	Propionispora hippei DSM 15287	1123003.3	wgs	PATRIC	1123003 tax ID	*
[Ref.: #66792]	Propionispora hippei DSM 15287	2585428088	draft	JGI IMG/M	1123003 tax ID	*

[Ref.: #30195]

GC-content

42.3 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Propionispora hippei DSM 15287 DSM 15287 NCBI: GCA_900141835.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	79.671	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	84.492	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	88.746	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	75.364	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	89.212	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	76.208	no

Availability in culture collections External links

[Ref.: #5828]

Culture collection no.

DSM 15287, ATCC BAA-665

[Ref.: #86149]

SI-ID 118517

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Propionispora hippei sp. nov., a novel Gram-negative, spore-forming anaerobe that produces propionic acid.	Abou-Zeid DM, Biebl H, Sproer C, Muller RJ	Int J Syst Evol Microbiol	10.1099/ijs.0.03054-0	2004	*

References

#5828

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15287

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30195

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26541 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#86149

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID118517.1 )

#26541

IJSEM 951 2004 ( DOI 10.1099/ijs.0.03054-0 , PubMed 15143048 )

* These data were automatically processed and therefore are not curated

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Propionispora hippei DSM 15287 DSM 15287

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