Bifidobacterium minimum F392 is an anaerobe bacterium that was isolated from sewage.
anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Bifidobacteriales |
| Family Bifidobacteriaceae |
| Genus Bifidobacterium |
| Species Bifidobacterium minimum |
| Full scientific name Bifidobacterium minimum Biavati et al. 1982 |
| @ref | Motility | Confidence | |
|---|---|---|---|
| 125438 | 94.5 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8528 | BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58) | Medium recipe at MediaDive | Name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58) Composition: Glucose 10.0 g/l Casein peptone 10.0 g/l Bacto Soytone 5.0 g/l Meat extract 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l MnSO4 x H2O 0.05 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Tween 80 Resazurin Distilled water |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8528 | A11.14 | A3alpha L-Lys-L-Ser |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | + | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | + | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | + | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | vitamin B1 metabolism | 92.31 | 12 of 13 | ||
| 66794 | starch degradation | 90 | 9 of 10 | ||
| 66794 | threonine metabolism | 90 | 9 of 10 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | palmitate biosynthesis | 86.36 | 19 of 22 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | serine metabolism | 77.78 | 7 of 9 | ||
| 66794 | valine metabolism | 77.78 | 7 of 9 | ||
| 66794 | NAD metabolism | 77.78 | 14 of 18 | ||
| 66794 | isoleucine metabolism | 75 | 6 of 8 | ||
| 66794 | ketogluconate metabolism | 75 | 6 of 8 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | photosynthesis | 71.43 | 10 of 14 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | glutamate and glutamine metabolism | 67.86 | 19 of 28 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | alanine metabolism | 58.62 | 17 of 29 | ||
| 66794 | tetrahydrofolate metabolism | 57.14 | 8 of 14 | ||
| 66794 | purine metabolism | 56.38 | 53 of 94 | ||
| 66794 | oxidative phosphorylation | 56.04 | 51 of 91 | ||
| 66794 | d-mannose degradation | 55.56 | 5 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 55.56 | 5 of 9 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | metabolism of disaccharids | 54.55 | 6 of 11 | ||
| 66794 | urea cycle | 53.85 | 7 of 13 | ||
| 66794 | degradation of pentoses | 53.57 | 15 of 28 | ||
| 66794 | glycolysis | 52.94 | 9 of 17 | ||
| 66794 | histidine metabolism | 51.72 | 15 of 29 | ||
| 66794 | degradation of sugar alcohols | 50 | 8 of 16 | ||
| 66794 | cis-vaccenate biosynthesis | 50 | 1 of 2 | ||
| 66794 | methionine metabolism | 50 | 13 of 26 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | C4 and CAM-carbon fixation | 50 | 4 of 8 | ||
| 66794 | Entner Doudoroff pathway | 50 | 5 of 10 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | coenzyme A metabolism | 50 | 2 of 4 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | lipid metabolism | 48.39 | 15 of 31 | ||
| 66794 | pyrimidine metabolism | 46.67 | 21 of 45 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | d-xylose degradation | 45.45 | 5 of 11 | ||
| 66794 | proline metabolism | 45.45 | 5 of 11 | ||
| 66794 | glutathione metabolism | 42.86 | 6 of 14 | ||
| 66794 | tyrosine metabolism | 42.86 | 6 of 14 | ||
| 66794 | citric acid cycle | 42.86 | 6 of 14 | ||
| 66794 | propanol degradation | 42.86 | 3 of 7 | ||
| 66794 | tryptophan metabolism | 42.11 | 16 of 38 | ||
| 66794 | arginine metabolism | 41.67 | 10 of 24 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 40 | 4 of 10 | ||
| 66794 | isoprenoid biosynthesis | 38.46 | 10 of 26 | ||
| 66794 | lysine metabolism | 38.1 | 16 of 42 | ||
| 66794 | gluconeogenesis | 37.5 | 3 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 37.5 | 3 of 8 | ||
| 66794 | non-pathway related | 34.21 | 13 of 38 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | aspartate and asparagine metabolism | 33.33 | 3 of 9 | ||
| 66794 | flavin biosynthesis | 33.33 | 5 of 15 | ||
| 66794 | L-lactaldehyde degradation | 33.33 | 1 of 3 | ||
| 66794 | octane oxidation | 33.33 | 1 of 3 | ||
| 66794 | formaldehyde oxidation | 33.33 | 1 of 3 | ||
| 66794 | leucine metabolism | 30.77 | 4 of 13 | ||
| 66794 | propionate fermentation | 30 | 3 of 10 | ||
| 66794 | reductive acetyl coenzyme A pathway | 28.57 | 2 of 7 | ||
| 66794 | benzoyl-CoA degradation | 28.57 | 2 of 7 | ||
| 66794 | degradation of hexoses | 27.78 | 5 of 18 | ||
| 66794 | androgen and estrogen metabolism | 25 | 4 of 16 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | ||
| 66794 | sulfate reduction | 23.08 | 3 of 13 | ||
| 66794 | arachidonic acid metabolism | 22.22 | 4 of 18 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 |
| Metadata FA analysis | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| @ref | 52432 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8528 | - | - | - | - | - | - | - | - | - | - | - | + | +/- | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | + | + | - | - | + | - | - | - | - | - | - | - | - | - |
Global distribution of 16S sequence LC071835 (>99% sequence identity) for Bifidobacterium minimum subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM42168v1 assembly for Bifidobacterium minimum DSM 20102 | contig | 1121109 | 70.23 | ||||
| 67770 | Bifmin assembly for Bifidobacterium minimum LMG 11592 | contig | 1693 | 69.6 | ||||
| 67770 | DSM-20102 assembly for Bifidobacterium minimum DSM 20102 | contig | 1121109 | 60.64 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Bifidobacterium minimum strain ATCC 27538 16S ribosomal RNA gene, partial sequence | M58741 | 1470 | 1693 | ||
| 20218 | Bifidobacterium minimum strain DSM 20102 16S ribosomal RNA gene, partial sequence | GQ487640 | 134 | 1693 | ||
| 20218 | Bifidobacterium minimum gene for 16S rRNA, partial sequence, strain: JCM 5821 | AB116326 | 475 | 1693 | ||
| 20218 | Bifidobacterium minimum gene for 16S rRNA, partial sequence, strain: JCM 5821 | AB507130 | 613 | 1693 | ||
| 20218 | Bifidobacterium minimum strain KCTC 3273 16S ribosomal RNA gene, partial sequence | GU361826 | 1476 | 1693 | ||
| 20218 | Bifidobacterium minimum strain LMG11592 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence | FJ231743 | 846 | 1693 | ||
| 67770 | Bifidobacterium minimum gene for 16S ribosomal RNA, partial sequence, strain: YIT 4097 | AB437350 | 1505 | 1693 | ||
| 67770 | Bifidobacterium minimum gene for 16S ribosomal RNA, partial sequence, strain: JCM 5821 | LC071835 | 1422 | 1693 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | anaerobe | 88.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 85.50 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 65.40 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.10 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 87.34 | no |
| 125438 | anaerobic | anaerobicⓘ | yes | 73.20 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 93.30 | no |
| 125438 | aerobic | aerobicⓘ | no | 91.35 | no |
| 125438 | thermophilic | thermophileⓘ | no | 93.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 94.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Diversity, ecology and intestinal function of bifidobacteria. | Bottacini F, Ventura M, van Sinderen D, O'Connell Motherway M. | Microb Cell Fact | 10.1186/1475-2859-13-s1-s4 | 2014 | |
| Designing primers and evaluation of the efficiency of propidium monoazide - Quantitative polymerase chain reaction for counting the viable cells of Lactobacillus gasseri and Lactobacillus salivarius. | Lai CH, Wu SR, Pang JC, Ramireddy L, Chiang YC, Lin CK, Tsen HY. | J Food Drug Anal | 10.1016/j.jfda.2016.10.004 | 2017 | ||
| Relationships among host genetics, gut microbiota, and asthma in US Hispanic/Latino adults. | Stanislawski MA, Litkowski E, Arehart CH, Luo K, Gilmore N, Lange LA, Lange EM, Barnes K, Avery CL, Meyer KA, Holguin F, North KE, Burk RD, Kaplan RC. | Nat Commun | 10.1038/s41467-025-65028-z | 2025 | ||
| Genetics | Fermentation of enset (Ensete ventricosum) in the Gamo highlands of Ethiopia: Physicochemical and microbial community dynamics. | Andeta AF, Vandeweyer D, Woldesenbet F, Eshetu F, Hailemicael A, Woldeyes F, Crauwels S, Lievens B, Ceusters J, Vancampenhout K, Van Campenhout L. | Food Microbiol | 10.1016/j.fm.2018.02.011 | 2018 | |
| Microbial ecology of selected traditional Ethiopian fermented products. | Sanz-Lopez C, Amato M, Torrent D, Borrego M, Anza M, Bibiso M, Grijalva-Vallejos N, Vilanova C, Porcar M, Pascual J. | Front Microbiol | 10.3389/fmicb.2025.1570914 | 2025 | ||
| Health benefits, antimicrobial activities, and potential applications of probiotics: A review. | Sepehr A, Miri ST, Aghamohammad S, Rahimirad N, Milani M, Pourshafie MR, Rohani M. | Medicine (Baltimore) | 10.1097/md.0000000000032412 | 2024 | ||
| Genetics | Host-Diet Effect on the Metabolism of Bifidobacterium. | Satti M, Modesto M, Endo A, Kawashima T, Mattarelli P, Arita M. | Genes (Basel) | 10.3390/genes12040609 | 2021 | |
| Metabolism | O2-inducible H2O2-forming NADPH oxidase is responsible for the hyper O2 sensitivity of Bifidobacterium longum subsp. infantis. | Tanaka K, Satoh T, Kitahara J, Uno S, Nomura I, Kano Y, Suzuki T, Niimura Y, Kawasaki S. | Sci Rep | 10.1038/s41598-018-29030-4 | 2018 | |
| Phylogeny | Compositional and Functional Characteristics of Swine Slurry Microbes through 16S rRNA Metagenomic Sequencing Approach. | Kumar H, Jang YN, Kim K, Park J, Jung MW, Park JE. | Animals (Basel) | 10.3390/ani10081372 | 2020 | |
| Phylogeny | Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics. | Lugli GA, Milani C, Turroni F, Duranti S, Ferrario C, Viappiani A, Mancabelli L, Mangifesta M, Taminiau B, Delcenserie V, van Sinderen D, Ventura M. | Appl Environ Microbiol | 10.1128/aem.02004-14 | 2014 | |
| Occurrence and Diversity of CRISPR-Cas Systems in the Genus Bifidobacterium. | Briner AE, Lugli GA, Milani C, Duranti S, Turroni F, Gueimonde M, Margolles A, van Sinderen D, Ventura M, Barrangou R. | PLoS One | 10.1371/journal.pone.0133661 | 2015 | ||
| Phylogeny | Phylogenetic Analysis of the Bifidobacterium Genus Using Glycolysis Enzyme Sequences. | Brandt K, Barrangou R. | Front Microbiol | 10.3389/fmicb.2016.00657 | 2016 | |
| Exploring the Bacterial Microbiota of Colombian Fermented Maize Dough "Masa Agria" (Maiz Añejo). | Chaves-Lopez C, Serio A, Delgado-Ospina J, Rossi C, Grande-Tovar CD, Paparella A. | Front Microbiol | 10.3389/fmicb.2016.01168 | 2016 | ||
| Identification of the bacterial community responsible for traditional fermentation during sour cassava starch, cachaça and minas cheese production using culture-independent 16s rRNA gene sequence analysis. | Lacerda IC, Gomes FC, Borelli BM, Faria CL, Franco GR, Mourao MM, Morais PB, Rosa CA. | Braz J Microbiol | 10.1590/s1517-838220110002000029 | 2011 | ||
| Metabolism | Genomic characterization and transcriptional studies of the starch-utilizing strain Bifidobacterium adolescentis 22L. | Duranti S, Turroni F, Lugli GA, Milani C, Viappiani A, Mangifesta M, Gioiosa L, Palanza P, van Sinderen D, Ventura M. | Appl Environ Microbiol | 10.1128/aem.01993-14 | 2014 | |
| Phylogeny | Exploring the diversity of the bifidobacterial population in the human intestinal tract. | Turroni F, Foroni E, Pizzetti P, Giubellini V, Ribbera A, Merusi P, Cagnasso P, Bizzarri B, de'Angelis GL, Shanahan F, van Sinderen D, Ventura M. | Appl Environ Microbiol | 10.1128/aem.02216-08 | 2009 | |
| Genomic diversity and relatedness of bifidobacteria isolated from a porcine cecum. | Simpson PJ, Stanton C, Fitzgerald GF, Ross RP. | J Bacteriol | 10.1128/jb.185.8.2571-2581.2003 | 2003 | ||
| Biotechnology | Microbial community dynamics during production of the Mexican fermented maize dough pozol. | ben Omar N, Ampe F. | Appl Environ Microbiol | 10.1128/aem.66.9.3664-3673.2000 | 2000 | |
| Genetics | Genome-Based Taxonomic Classification of the Phylum Actinobacteria. | Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M. | Front Microbiol | 10.3389/fmicb.2018.02007 | 2018 | |
| Phylogeny | Bifidobacterium mongoliense sp. nov., from airag, a traditional fermented mare's milk product from Mongolia. | Watanabe K, Makino H, Sasamoto M, Kudo Y, Fujimoto J, Demberel S. | Int J Syst Evol Microbiol | 10.1099/ijs.0.006247-0 | 2009 |
| #8528 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20102 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #52432 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 34982 |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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