[Ref.: #8813] |
Sample type/isolated from |
infant faeces |
|
[Ref.: #52437] |
Sample type/isolated from |
Infant feces |
|
[Ref.: #67770] |
Sample type/isolated from |
Feces of an infant |
|
[Ref.: #121984] |
Sample type/isolated from |
Human, Infant, feces |
[Ref.: #121984] |
Isolation date |
1974 |
* marker position based on {}
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Isolation sources categories |
#Infection |
#Patient |
- |
#Host Body Product |
#Gastrointestinal tract |
#Feces (Stool) |
#Host |
#Human |
#Child |
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-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
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16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
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Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Bifidobacterium pseudocatenulatum gene for 16S ribosomal RNA, partial sequence, strain: JCM 1200 |
LC071796 |
1392 |
|
547043 tax ID |
[Ref.: #20218] |
Bifidobacterium pseudocatenulatum (ATCC 27919) 16S ribosomal RNA gene, partial |
M84785 |
641 |
|
28026 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium pseudocatenulatum DSM 20438 strain JCM 1200 16S ribosomal RNA gene, partial sequence |
GQ227711 |
287 |
|
547043 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium pseudocatenulatum gene for 16S rRNA, partial sequence, strain: JCM 1200 |
AB507133 |
684 |
|
547043 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium pseudocatenulatum gene for 16S rRNA, partial sequence, strain: JCM 1200 |
D86187 |
1519 |
|
547043 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium pseudocatenulatum strain KCTC 3223 16S ribosomal RNA gene, partial sequence |
GU361827 |
1480 |
|
28026 tax ID |
* |
[Ref.: #20218] |
Bifidobacterium pseudocatenulatum strain LMG10505 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence |
FJ231744 |
792 |
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28026 tax ID |
* |
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Availability in culture collections External links
[Ref.: #8813] |
Culture collection no. |
DSM 20438, ATCC 27919, CCUG 34989, JCM 1200, BCRC 15476, CCM 7094, CECT 5776, CGMCC 1.2277, CIP 104168, HAMBI 562, KCTC 3223, LMG 10505, NCAIM B.02022, VTT E-991439 |
[Ref.: #71360] |
SI-ID 1256
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* |
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Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
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Title |
Authors |
Journal |
DOI |
Year |
|
Genetics |
Complete genome sequence of Bifidobacterium pseudocatenulatum JCM 1200(T) isolated from infant feces. |
Morita H, Toh H, Oshima K, Nakano A, Arakawa K, Takayama Y, Kurokawa R, Takanashi K, Honda K, Hattori M |
J Biotechnol |
10.1016/j.jbiotec.2015.06.416 |
2015 |
* |
Metabolism |
Myo-inositol hexakisphosphate degradation by Bifidobacterium pseudocatenulatum ATCC 27919 improves mineral availability of high fibre rye-wheat sour bread. |
Garcia-Mantrana I, Monedero V, Haros M |
Food Chem |
10.1016/j.foodchem.2015.01.099 |
2015 |
* |
Phylogeny |
Bifidobacterium moukalabense sp. nov., isolated from the faeces of wild west lowland gorilla (Gorilla gorilla gorilla). |
Tsuchida S, Takahashi S, Nguema PPM, Fujita S, Kitahara M, Yamagiwa J, Ngomanda A, Ohkuma M, Ushida K |
Int J Syst Evol Microbiol |
10.1099/ijs.0.055186-0 |
2013 |
* |
Pathogenicity |
Prebiotic-non-digestible oligosaccharides preference of probiotic bifidobacteria and antimicrobial activity against Clostridium difficile. |
Kondepudi KK, Ambalam P, Nilsson I, Wadstrom T, Ljungh A |
Anaerobe |
10.1016/j.anaerobe.2012.08.005 |
2012 |
* |
Metabolism |
Novel phytases from Bifidobacterium pseudocatenulatum ATCC 27919 and Bifidobacterium longum subsp. infantis ATCC 15697. |
Tamayo-Ramos JA, Sanz-Penella JM, Yebra MJ, Monedero V, Haros M |
Appl Environ Microbiol |
10.1128/AEM.00782-12 |
2012 |
* |
Phylogeny |
Bifidobacterium kashiwanohense sp. nov., isolated from healthy infant faeces. |
Morita H, Nakano A, Onoda H, Toh H, Oshima K, Takami H, Murakami M, Fukuda S, Takizawa T, Kuwahara T, Ohno H, Tanabe S, Hattori M |
Int J Syst Evol Microbiol |
10.1099/ijs.0.024521-0 |
2010 |
* |
Metabolism |
Phytate degradation by human gut isolated Bifidobacterium pseudocatenulatum ATCC27919 and its probiotic potential. |
Haros M, Carlsson NG, Almgren A, Larsson-Alminger M, Sandberg AS, Andlid T |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2009.07.015 |
2009 |
* |
|
Measurements of Intra- and Extra-Cellular 5-Methyltetrahydrofolate Indicate that Bifidobacterium Adolescentis DSM 20083(T) and Bifidobacterium Pseudocatenulatum DSM 20438(T) Do Not Actively Excrete 5-Methyltetrahydrofolate In vitro. |
Kopp M, Durr K, Steigleder M, Clavel T, Rychlik M |
Front Microbiol |
10.3389/fmicb.2017.00445 |
2017 |
* |
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- References
-
#8813 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20438
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-
-
-
#40674 |
; Curators of the CIP;
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-
#52437 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 34989
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-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68371 |
Automatically annotated from API 50CH acid .
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-
#68382 |
Automatically annotated from API zym .
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-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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-
-
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#71360 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID1256.1 )
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-
#121984 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 104168
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- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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